SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000107614
Gene: TRDMT1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr10:17137336-17202054 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_020900003 chr10:16933530-17089899 Sample_02_0209 Lung MRC-5_MRC5_1DPT 3 29 4723 405 47 270 1186 CUBN,TRDMT1
SE_02_056900008 chr10:16933672-17093215 Sample_02_0569 Periodontal ligament mesenchymal stem cell 8 78 4820 418 48 270 1186 CUBN,TRDMT1
SE_02_017300018 chr10:16944300-17090791 Sample_02_0173 Lung IMR-90_senescent 18 26 4425 392 45 242 1034 CUBN,TRDMT1
SE_02_044200079 chr10:16964823-17091208 Sample_02_0442 Bone MG63.3 79 74 3814 310 41 239 778 CUBN,TRDMT1
SE_02_007300038 chr10:16983541-17089220 Sample_02_0073 Other 90-8TL_DMSO 38 16 3101 222 22 225 728 CUBN,TRDMT1
SE_02_118500014 chr10:16983700-17076381 Sample_02_1185 Brain GBM14 14 18 2694 193 17 200 561 CUBN,TRDMT1
SE_02_118600052 chr10:16983990-17042221 Sample_02_1186 Brain GBM15 52 13 1732 133 16 136 222 CUBN,TRDMT1
SE_02_026500102 chr10:16983996-17042740 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 102 9 1746 134 16 136 222 CUBN,TRDMT1
SE_02_079900017 chr10:16984031-17043949 Sample_02_0799 Brain MESMN1 17 14 1773 135 16 139 243 CUBN,TRDMT1
SE_02_057200101 chr10:16984060-17043981 Sample_02_0572 Brain LN229_1_mM_glucose 101 21 1773 135 16 139 243 CUBN,TRDMT1
SE_02_128000160 chr10:16984076-17044039 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 160 16 1773 135 16 139 246 CUBN,TRDMT1
SE_02_141000239 chr10:16984252-17042507 Sample_02_1410 Brain GSC6 239 12 1738 134 16 132 188 CUBN,TRDMT1
SE_02_096500019 chr10:16984384-17046819 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 19 24 1842 137 16 148 297 CUBN,TRDMT1
SE_02_152100182 chr10:16984466-17043473 Sample_02_1521 Skin A375 DMSO 182 12 1745 135 15 132 159 CUBN,TRDMT1
SE_02_079700039 chr10:16984533-17085619 Sample_02_0797 Brain PNMNK1 39 20 2969 216 16 206 559 CUBN,TRDMT1
SE_02_085600070 chr10:16984548-17042485 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 70 10 1727 134 15 132 159 CUBN,TRDMT1
SE_02_017100028 chr10:16984578-17089984 Sample_02_0171 Lung IMR-90_proliferating 28 10 3102 226 18 221 652 CUBN,TRDMT1
SE_02_096300214 chr10:16984681-17042733 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 214 9 1728 133 15 132 159 CUBN,TRDMT1
SE_02_119300415 chr10:16984698-17041844 Sample_02_1193 Brain GBM27 415 16 1704 132 15 129 159 CUBN,TRDMT1
SE_02_152200383 chr10:16984698-17043109 Sample_02_1522 Skin A375 RTKi 383 15 1732 134 15 132 159 CUBN,TRDMT1
SE_02_005400133 chr10:16984702-17042688 Sample_02_0054 Lung IMR-90_DMSO_1 133 9 1727 133 15 132 159 CUBN,TRDMT1
SE_02_085700466 chr10:16984736-17042430 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 466 8 1722 133 15 132 159 CUBN,TRDMT1
SE_02_117700110 chr10:16984752-17042049 Sample_02_1177 Brain GBM05 110 15 1703 132 15 132 159 CUBN,TRDMT1
SE_02_079600038 chr10:16984762-17042204 Sample_02_0796 Brain 2229 38 10 1710 132 15 132 159 CUBN,TRDMT1
SE_02_085800071 chr10:16984772-17043998 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 71 10 1753 134 15 135 187 CUBN,TRDMT1
SE_02_085400068 chr10:16984779-17042488 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 68 11 1720 133 15 132 159 CUBN,TRDMT1
SE_02_083900006 chr10:16984796-17078156 Sample_02_0839 Embryo hNPCs_K755R/+ 6 21 2738 196 15 198 485 CUBN,TRDMT1
SE_02_017200135 chr10:16984821-17042637 Sample_02_0172 Lung IMR-90_quiescent 135 7 1722 133 15 132 159 CUBN,TRDMT1
SE_02_044300156 chr10:16984852-17089072 Sample_02_0443 Bone MG63 156 42 3057 220 17 221 652 CUBN,TRDMT1
SE_02_011600201 chr10:16984855-17043347 Sample_02_0116 Mammary gland MDA-MB-231_untreat 201 6 1731 134 15 132 159 CUBN,TRDMT1
SE_02_142800082 chr10:16984870-17042711 Sample_02_1428 Shoulder fibroblast_316 82 16 1719 133 15 132 159 CUBN,TRDMT1
SE_02_044700203 chr10:16984890-17039133 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 203 33 1619 128 15 125 124 CUBN,TRDMT1
SE_02_049900380 chr10:16984893-17042455 Sample_02_0499 Fetal lung IMR90 IR Senescence 380 20 1714 133 15 132 159 CUBN,TRDMT1
SE_02_098400026 chr10:16984894-17041927 Sample_02_0984 Brain H3.3K27M-KO_DIPGXIII-C5P5 26 13 1696 132 15 129 159 CUBN,TRDMT1
SE_02_105000105 chr10:16984913-17089111 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 105 35 3055 221 18 221 652 CUBN,TRDMT1
SE_02_085500035 chr10:16984932-17043478 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 35 8 1730 134 15 132 159 CUBN,TRDMT1
SE_02_119400245 chr10:16984939-17041858 Sample_02_1194 Brain GBM28 245 18 1695 132 15 129 159 CUBN,TRDMT1
SE_02_045200156 chr10:16984964-17038800 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 156 12 1608 127 15 119 124 CUBN,TRDMT1
SE_02_099100195 chr10:16984964-17042686 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 195 10 1717 133 15 132 159 CUBN,TRDMT1
SE_02_015100120 chr10:16984985-17043272 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 120 7 1726 134 15 132 159 CUBN,TRDMT1
SE_02_143600099 chr10:16985071-17089138 Sample_02_1436 Liver LSEC-Ctrl 99 27 3057 221 18 221 652 CUBN,TRDMT1
SE_02_011000783 chr10:16985194-17043325 Sample_02_0110 Ovaries IOE11 783 7 1722 134 15 132 159 CUBN,TRDMT1
SE_01_007300759 chr10:16985260-17039889 Sample_01_0073 Coronary artery coronary-artery 759 8 1634 128 15 125 124 CUBN,TRDMT1
SE_02_010700279 chr10:16985260-17042910 Sample_02_0107 Endometrium EEC16 279 7 1712 134 15 132 159 CUBN,TRDMT1
SE_02_072700346 chr10:16985273-17042394 Sample_02_0727 Fetal lung IMR90_Etoposide 346 12 1703 133 15 132 159 CUBN,TRDMT1
SE_02_018200158 chr10:16985350-17042998 Sample_02_0182 melanoma LOX-IMVI 158 9 1708 134 15 132 159 CUBN,TRDMT1
SE_01_005600103 chr10:16985350-17043096 Sample_01_0056 Bone osteoblast 103 8 1709 134 15 132 159 CUBN,TRDMT1
SE_02_096800212 chr10:16985352-17042558 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 212 7 1700 133 15 132 159 CUBN,TRDMT1
SE_02_097600026 chr10:16985405-17041927 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 26 12 1680 132 15 129 159 CUBN,TRDMT1
SE_02_135400502 chr10:16985453-17042631 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 502 12 1698 132 15 132 159 CUBN,TRDMT1
SE_02_047400123 chr10:16985463-17042448 Sample_02_0474 Fibroblast umbilical cord Fibroblast 123 10 1695 132 15 132 159 CUBN,TRDMT1
SE_02_036600290 chr10:16985485-17039610 Sample_02_0366 Skeletal muscle NCI0082 290 9 1618 127 15 125 124 CUBN,TRDMT1
SE_02_061100596 chr10:16985486-17039550 Sample_02_0611 Liposarcoma DDLPS_T1 596 26 1617 127 15 125 124 CUBN,TRDMT1
SE_02_117800358 chr10:16985504-17041986 Sample_02_1178 Brain GBM07 358 12 1676 131 15 129 159 CUBN,TRDMT1
SE_02_135500192 chr10:16985546-17042443 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 192 9 1694 132 15 132 159 CUBN,TRDMT1
SE_02_158400038 chr10:16985546-17089435 Sample_02_1584 Brain U87 GBM_Mock 38 15 3046 221 18 221 652 CUBN,TRDMT1
SE_02_135200461 chr10:16985547-17042680 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 461 11 1697 132 15 132 159 CUBN,TRDMT1
SE_02_061300275 chr10:16985557-17039408 Sample_02_0613 Liposarcoma MLPS_T1 275 30 1609 127 15 125 124 CUBN,TRDMT1
SE_02_142600077 chr10:16985559-17042083 Sample_02_1426 Shoulder fibroblast_341 77 13 1676 131 15 132 159 CUBN,TRDMT1
SE_02_145200103 chr10:16985589-17038832 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 103 11 1589 126 15 119 124 CUBN,TRDMT1
SE_02_061400230 chr10:16985612-17042050 Sample_02_0614 Liposarcoma MLPS_T2 230 20 1671 131 15 132 159 CUBN,TRDMT1
SE_02_142700174 chr10:16985619-17042103 Sample_02_1427 Shoulder fibroblast_343 174 16 1676 131 15 132 159 CUBN,TRDMT1
SE_02_017500143 chr10:16985634-17034360 Sample_02_0175 Lung IMR-90_Etoposide 143 19 1479 123 13 111 124 CUBN,TRDMT1
SE_02_090600704 chr10:16985645-17039386 Sample_02_0906 Heart left ventricle_DCM_LV1072 704 14 1606 127 15 125 124 CUBN,TRDMT1
SE_02_011100733 chr10:16985673-17042514 Sample_02_0111 Ovaries IOE4 733 6 1689 132 15 132 159 CUBN,TRDMT1
SE_02_126300061 chr10:16985730-17042868 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 61 11 1691 132 15 132 159 CUBN,TRDMT1
SE_02_040100011 chr10:16985787-17117115 Sample_02_0401 Mammary gland SUM159PT-T47D 11 17 3902 326 27 268 1055 CUBN,TRDMT1
SE_02_141500506 chr10:16985792-17042129 Sample_02_1415 Brain DIPGIV 506 14 1670 131 15 132 159 CUBN,TRDMT1
SE_02_086800285 chr10:16985796-17042606 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 285 34 1685 132 15 132 159 CUBN,TRDMT1
SE_02_137400165 chr10:16985806-17043927 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 165 24 1716 133 15 135 181 CUBN,TRDMT1
SE_02_091300695 chr10:16985816-17047378 Sample_02_0913 Heart left ventricle_DCM_LV1304 695 20 1804 135 15 148 296 CUBN,TRDMT1
SE_02_090800916 chr10:16985828-17039269 Sample_02_0908 Heart left ventricle_DCM_LV1262 916 16 1593 127 15 125 124 CUBN,TRDMT1
SE_02_088000307 chr10:16985829-17034555 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 307 9 1478 123 13 111 124 CUBN,TRDMT1
SE_02_145400205 chr10:16985838-17038982 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 205 9 1581 127 15 122 124 CUBN,TRDMT1
SE_02_089601047 chr10:16985876-17039527 Sample_02_0896 Heart left ventricle_LV1294 1047 20 1603 127 15 125 124 CUBN,TRDMT1
SE_02_142500100 chr10:16986060-17039698 Sample_02_1425 Shoulder fibroblast_384 100 11 1600 127 15 125 124 CUBN,TRDMT1
SE_02_046600840 chr10:16986093-17039545 Sample_02_0466 Adipose visceral adipocytes 840 27 1596 127 15 125 124 CUBN,TRDMT1
SE_02_155500033 chr10:16986121-17101830 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 33 43 3386 267 23 228 702 CUBN,TRDMT1
SE_02_061200459 chr10:16986267-17039274 Sample_02_0612 Liposarcoma DDLPS_T2 459 19 1579 127 15 124 124 CUBN,TRDMT1
SE_02_090701325 chr10:16986328-17039319 Sample_02_0907 Heart left ventricle_DCM_LV1223 1325 19 1580 127 15 124 124 CUBN,TRDMT1
SE_02_091500375 chr10:16986329-17039272 Sample_02_0915 Heart left ventricle_DCM_LV1371 375 23 1577 127 15 124 124 CUBN,TRDMT1
SE_02_090000854 chr10:16986334-17039374 Sample_02_0900 Heart left ventricle_LV1452 854 18 1582 127 15 124 124 CUBN,TRDMT1
SE_02_090501036 chr10:16986374-17039422 Sample_02_0905 Heart left ventricle_DCM_LV1033 1036 15 1584 127 15 124 124 CUBN,TRDMT1
SE_02_091200994 chr10:16986449-17039397 Sample_02_0912 Heart left ventricle_DCM_LV1300 994 15 1580 127 15 124 124 CUBN,TRDMT1
SE_02_091400421 chr10:16986483-17039262 Sample_02_0914 Heart left ventricle_DCM_LV1342 421 17 1573 127 15 124 124 CUBN,TRDMT1
SE_02_090301278 chr10:16986492-17038787 Sample_02_0903 Heart left ventricle_DCM_LV1009 1278 17 1556 126 15 118 124 CUBN,TRDMT1
SE_02_088800949 chr10:16986602-17039230 Sample_02_0888 Heart left ventricle_LV1160 949 16 1568 127 15 123 124 CUBN,TRDMT1
SE_02_046501498 chr10:16987166-17049348 Sample_02_0465 Adipose subcutaneous adipocytes 1498 20 1820 138 15 147 322 CUBN,TRDMT1
SE_02_111100831 chr10:16989795-17030922 Sample_02_1111 Other HGrC1_SMAD2/3KO 831 15 1237 115 11 91 124 CUBN,TRDMT1
SE_02_023200234 chr10:16993689-17034860 Sample_02_0232 Tonsil ILC3 234 8 1231 110 11 91 58 CUBN,TRDMT1
SE_02_023401114 chr10:16995261-17034744 Sample_02_0234 Tonsil Th17 1114 9 1191 109 10 90 58 CUBN,TRDMT1
SE_02_012700538 chr10:16995716-17033697 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 538 7 1150 109 10 87 58 CUBN,TRDMT1
SE_02_013100488 chr10:16995716-17033697 Sample_02_0131 Lung 1015_PT 488 7 1150 109 10 87 58 CUBN,TRDMT1
SE_02_013200650 chr10:16995721-17033660 Sample_02_0132 Lung 1015_CL 650 6 1149 109 10 87 58 CUBN,TRDMT1
SE_00_000300651 chr10:16995730-17030502 Sample_00_0003 Adrenal gland adrenal-gland_97d 651 6 1056 108 9 84 58 CUBN,TRDMT1
SE_02_040200051 chr10:16995858-17089388 Sample_02_0402 Mammary gland SUM159PT-ZR-75-1 51 17 2726 207 15 200 586 CUBN,TRDMT1
SE_02_155900801 chr10:16996338-17026930 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 801 13 959 104 9 73 58 CUBN,TRDMT1
SE_02_141900150 chr10:16996358-17030451 Sample_02_1419 Brain hNSC 150 7 1037 107 9 83 58 CUBN,TRDMT1
SE_02_075501213 chr10:17001787-17023722 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1213 4 693 82 4 52 58 CUBN,TRDMT1
SE_00_002400861 chr10:17001919-17030443 Sample_00_0024 Embryo mesendoderm 861 6 846 88 6 72 58 CUBN,TRDMT1
SE_02_093200154 chr10:17004607-17032023 Sample_02_0932 Embryo H9 WT_1 154 7 835 81 7 60 58 CUBN,TRDMT1
SE_02_065900560 chr10:17009383-17032029 Sample_02_0659 Lung H23 560 5 693 64 6 41 58 CUBN,TRDMT1
SE_02_023100490 chr10:17020742-17035079 Sample_02_0231 Tonsil ILC1 490 4 374 15 6 42 0 CUBN,TRDMT1
SE_02_111300285 chr10:17021457-17030166 Sample_02_1113 Bone U2OS 285 3 218 13 4 35 0 CUBN,TRDMT1
SE_02_010100689 chr10:17021478-17039971 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 689 3 475 18 7 55 0 CUBN,TRDMT1
SE_02_132700266 chr10:17021810-17030218 Sample_02_1327 Hindbrain Hindbrain derived neural stem cells_NS13_H3.3K27M_WT 266 7 215 12 4 35 0 CUBN,TRDMT1
SE_02_126700250 chr10:17022185-17030458 Sample_02_1267 Bone Im-GCT-4072_G34W 250 2 211 12 4 34 0 CUBN,TRDMT1
SE_00_004400562 chr10:17022217-17033992 Sample_00_0044 Cord blood T-cell 562 2 314 13 5 36 0 CUBN,TRDMT1
SE_00_000800668 chr10:17022228-17034065 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 668 2 315 13 5 38 0 CUBN,TRDMT1
SE_02_010800451 chr10:17022344-17030814 Sample_02_0108 Fallopian tube FT246 451 2 218 12 4 33 0 CUBN,TRDMT1
SE_02_143000755 chr10:17022463-17026127 Sample_02_1430 Blood Kasumi-3_mock-infected 755 3 106 8 2 17 0 CUBN,TRDMT1
SE_01_002600279 chr10:17022476-17031019 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 279 2 226 12 4 33 0 CUBN,TRDMT1
SE_02_014800380 chr10:17022537-17030552 Sample_02_0148 Blood CD8_T_cells 380 2 210 12 4 33 0 CUBN,TRDMT1
SE_02_070700758 chr10:17022581-17029586 Sample_02_0707 Pancreas BxPC3 WT 758 4 194 12 4 33 0 CUBN,TRDMT1
SE_02_137900513 chr10:17022626-17030184 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 513 5 200 11 4 33 0 CUBN,TRDMT1
SE_02_007600677 chr10:17022640-17030758 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 677 2 211 11 4 33 0 CUBN,TRDMT1
SE_02_059300559 chr10:17022696-17030468 Sample_02_0593 Fetal spleenocytes fetal naive T cells 559 4 203 11 4 33 0 CUBN,TRDMT1
SE_02_088301085 chr10:17022713-17030913 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1085 2 218 11 4 33 0 CUBN,TRDMT1
SE_02_138000796 chr10:17022791-17030179 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 796 8 198 11 4 29 0 CUBN,TRDMT1
SE_02_083100332 chr10:17022818-17085753 Sample_02_0831 Umblical vein HUVECs_TNF0min 332 32 1773 103 8 132 458 CUBN,TRDMT1,VIM
SE_02_126800501 chr10:17022831-17030248 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 501 3 198 11 4 28 0 CUBN,TRDMT1
SE_02_126100900 chr10:17022843-17042319 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 900 6 518 21 7 55 35 CUBN,TRDMT1
SE_02_126000668 chr10:17022844-17043274 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 668 6 539 22 7 55 35 CUBN,TRDMT1
SE_02_058500941 chr10:17022931-17031004 Sample_02_0585 Umbilical vein HUVEC 0hour 941 6 214 10 4 28 0 CUBN,TRDMT1
SE_02_102100045 chr10:17022957-17089055 Sample_02_1021 Mammary gland SUM159R 45 11 1860 107 9 144 528 CUBN,TRDMT1
SE_02_062000260 chr10:17022986-17030951 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 260 4 209 10 4 28 0 CUBN,VIM,RSU1,TRDMT1
SE_02_084800398 chr10:17024477-17030133 Sample_02_0848 iPSCs iPSC_DMSO 398 3 140 5 2 20 0 CUBN,TRDMT1
SE_02_021900251 chr10:17024726-17030133 Sample_02_0219 Mammary gland MDA-MB-231 251 6 137 5 2 20 0 CUBN,TRDMT1
SE_02_017200721 chr10:17055918-17089813 Sample_02_0172 Lung IMR-90_quiescent 721 6 984 73 3 65 330 CUBN,TRDMT1
SE_02_072701154 chr10:17056250-17089080 Sample_02_0727 Fetal lung IMR90_Etoposide 1154 8 948 67 3 65 330 CUBN,TRDMT1
SE_02_137601115 chr10:17056424-17089045 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1115 13 943 66 2 65 330 CUBN,TRDMT1
SE_02_113900274 chr10:17056424-17089618 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 274 8 962 70 3 65 330 CUBN,TRDMT1
SE_02_126300426 chr10:17056427-17089395 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 426 7 953 68 3 65 330 CUBN,TRDMT1
SE_02_045200545 chr10:17056434-17089111 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 545 10 944 67 3 65 330 CUBN,TRDMT1
SE_02_137700738 chr10:17056494-17089035 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 738 17 941 66 2 65 330 CUBN,TRDMT1
SE_02_049900769 chr10:17056530-17089371 Sample_02_0499 Fetal lung IMR90 IR Senescence 769 11 947 68 3 65 330 CUBN,TRDMT1
SE_02_030500699 chr10:17056579-17077153 Sample_02_0305 Neuroblastoma SH-EP 699 3 569 38 0 41 163 CUBN,TRDMT1
SE_02_145200298 chr10:17056595-17089211 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 298 9 938 65 3 65 330 CUBN,TRDMT1
SE_02_028100290 chr10:17056710-17078288 Sample_02_0281 Bone U2OS 290 2 617 40 0 42 163 CUBN,TRDMT1
SE_02_126100366 chr10:17056871-17089075 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 366 9 928 65 3 65 330 CUBN,TRDMT1
SE_02_126700523 chr10:17057026-17089255 Sample_02_1267 Bone Im-GCT-4072_G34W 523 9 928 64 3 65 330 CUBN,TRDMT1
SE_02_084000524 chr10:17057060-17093808 Sample_02_0840 Embryo hNPCs_R1159Q/+ 524 9 1084 84 5 65 330 CUBN,TRDMT1
SE_02_086701275 chr10:17057121-17087821 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1275 18 890 63 1 57 276 CUBN,TRDMT1
SE_01_011700558 chr10:17057143-17077735 Sample_01_0117 Lung fibroblast of lung 558 8 589 39 0 42 163 CUBN,TRDMT1
SE_02_113700537 chr10:17057224-17089424 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 537 8 931 65 3 65 330 CUBN,TRDMT1
SE_02_126800466 chr10:17057654-17087890 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 466 6 874 60 1 57 276 CUBN,TRDMT1
SE_02_011600307 chr10:17057697-17124589 Sample_02_0116 Mammary gland MDA-MB-231_untreat 307 9 2021 187 14 128 816 CUBN,TRDMT1
SE_02_099100615 chr10:17057736-17088428 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 615 7 887 60 1 65 324 CUBN,TRDMT1
SE_02_113800776 chr10:17057881-17089714 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 776 5 920 64 3 65 330 CUBN,TRDMT1
SE_02_113600316 chr10:17057973-17076642 Sample_02_1136 Bone U2OS-anaphase/telophase 316 4 513 33 0 40 163 CUBN,TRDMT1
SE_02_099000396 chr10:17058013-17089436 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 396 12 907 62 3 65 330 CUBN,TRDMT1
SE_02_076201349 chr10:17058061-17124281 Sample_02_0762 Podocyte podocyte_CTL 1349 12 1996 186 14 127 816 CUBN,TRDMT1
SE_02_015100485 chr10:17058159-17089615 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 485 4 906 64 3 65 330 CUBN,TRDMT1
SE_02_015000413 chr10:17058352-17076698 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 413 2 499 33 0 41 163 CUBN,TRDMT1
SE_01_001900189 chr10:17058380-17089219 Sample_01_0019 Brain and spinal cord astrocyte 189 5 885 61 3 65 330 CUBN,TRDMT1
SE_02_153800515 chr10:17058411-17076840 Sample_02_1538 Mammary gland MDA-MB-231 515 3 504 33 0 41 163 CUBN,TRDMT1
SE_02_126500882 chr10:17058460-17076963 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 882 3 509 34 0 41 163 CUBN,TRDMT1
SE_02_010800340 chr10:17058469-17077235 Sample_02_0108 Fallopian tube FT246 340 2 517 34 0 41 163 CUBN,TRDMT1
SE_01_005601129 chr10:17058501-17089504 Sample_01_0056 Bone osteoblast 1129 5 891 63 3 65 330 CUBN,TRDMT1
SE_02_135200647 chr10:17058535-17076672 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 647 8 494 33 0 41 163 CUBN,TRDMT1
SE_02_135400813 chr10:17058543-17076872 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 813 4 502 33 0 41 163 CUBN,TRDMT1
SE_01_006600246 chr10:17058560-17078234 Sample_01_0066 Smooth muscle smooth-muscle-cell 246 2 560 36 0 42 163 CUBN,TRDMT1
SE_02_111500334 chr10:17058590-17076853 Sample_02_1115 Liver HepG2 334 4 499 33 0 41 163 CUBN,TRDMT1
SE_02_126601039 chr10:17058636-17077034 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 1039 3 506 34 0 41 163 CUBN,TRDMT1
SE_02_125900410 chr10:17058640-17077376 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 410 5 521 34 0 41 163 CUBN,TRDMT1
SE_02_111300203 chr10:17058645-17088394 Sample_02_1113 Bone U2OS 203 5 857 60 1 65 322 CUBN,TRDMT1
SE_02_017500501 chr10:17058659-17089200 Sample_02_0175 Lung IMR-90_Etoposide 501 8 879 61 3 65 330 CUBN,TRDMT1
SE_02_132801279 chr10:17058680-17076706 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1279 7 492 33 0 41 163 CUBN,TRDMT1
SE_02_126000255 chr10:17058750-17089035 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 255 9 871 60 2 65 330 CUBN,TRDMT1
SE_02_087800956 chr10:17058752-17088432 Sample_02_0878 Ovary SVOG3e cells_noDox_control 956 5 854 60 1 65 324 CUBN,TRDMT1
SE_02_087900663 chr10:17058752-17089104 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 663 6 872 61 3 65 330 CUBN,TRDMT1
SE_02_041901104 chr10:17058754-17089040 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 1104 8 871 60 2 65 330 CUBN,TRDMT1
SE_02_055400276 chr10:17058769-17089410 Sample_02_0554 Other Aska shSSX 276 8 881 62 3 65 330 CUBN,TRDMT1
SE_02_150600432 chr10:17058769-17094210 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 432 14 1047 82 5 65 330 CUBN,TRDMT1
SE_02_113300890 chr10:17058773-17076958 Sample_02_1133 Liver Hepatic stellate cells 890 4 502 34 0 41 163 CUBN,TRDMT1
SE_02_049700235 chr10:17058841-17076307 Sample_02_0497 Fetal lung IMR90_#1 235 4 475 32 0 40 163 CUBN,TRDMT1
SE_02_047401458 chr10:17058854-17077896 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1458 7 541 36 0 42 163 CUBN,TRDMT1
SE_02_113400579 chr10:17058881-17075377 Sample_02_1134 Bone U2OS-interphase 579 4 455 32 0 37 163 CUBN,TRDMT1
SE_02_128001251 chr10:17058943-17077731 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1251 6 534 36 0 42 163 CUBN,TRDMT1
SE_02_076601251 chr10:17058967-17089307 Sample_02_0766 Ovary PEO1 1251 8 874 62 3 65 330 CUBN,TRDMT1
SE_02_076900517 chr10:17058985-17089780 Sample_02_0769 Ovary HEYA8 517 20 889 65 3 65 330 CUBN,TRDMT1
SE_02_153500370 chr10:17059186-17089085 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 370 7 862 61 3 65 330 CUBN,TRDMT1
SE_02_145400646 chr10:17059318-17089075 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 646 7 860 61 3 64 330 CUBN,TRDMT1
SE_02_088300763 chr10:17059470-17088520 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 763 5 843 60 1 64 330 CUBN,TRDMT1
SE_02_139900603 chr10:17059536-17088122 Sample_02_1399 Bone U2OS_siMLL3.1 603 8 830 60 1 57 287 CUBN,TRDMT1
SE_02_137900925 chr10:17059550-17076401 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 925 5 465 32 0 39 163 CUBN,TRDMT1
SE_02_088000985 chr10:17059838-17089131 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 985 6 856 61 3 62 330 CUBN,TRDMT1
SE_02_057200410 chr10:17060113-17077857 Sample_02_0572 Brain LN229_1_mM_glucose 410 10 516 35 0 38 163 CUBN,TRDMT1
SE_02_010100861 chr10:17061048-17094937 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 861 6 1008 81 5 61 330 CUBN,TRDMT1
SE_01_002600284 chr10:17061109-17077302 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 284 3 455 32 0 37 163 CUBN,TRDMT1
SE_02_018200868 chr10:17061260-17089239 Sample_02_0182 melanoma LOX-IMVI 868 5 816 59 3 61 330 CUBN,TRDMT1
SE_02_093800950 chr10:17061446-17076838 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 950 2 432 31 0 37 163 CUBN,TRDMT1
SE_02_064601339 chr10:17061591-17076387 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1339 3 414 30 0 36 163 CUBN,TRDMT1
SE_02_062000694 chr10:17061897-17085097 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 694 8 679 49 1 46 221 CUBN,RSU1,TRDMT1
SE_02_040100052 chr10:17151296-17239348 Sample_02_0401 Mammary gland SUM159PT-T47D 52 17 2565 370 14 227 1474 VIM,TRDMT1,CUBN
SE_02_008700156 chr10:17170520-17259609 Sample_02_0087 Pancreas MiaPaca2 156 6 2593 335 13 223 1022 VIM,TRDMT1,CUBN
SE_02_155500362 chr10:17171247-17215465 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 362 8 1279 234 9 62 243 VIM-AS1,TRDMT1,VIM,CUBN
SE_01_008700192 chr10:17174070-17239436 Sample_01_0087 Thyroid gland thyroid-gland 192 10 1875 267 12 190 1022 VIM,TRDMT1,CUBN
SE_02_067200414 chr10:17174552-17221284 Sample_02_0672 Endometrium endometrium cancer_DSG 414 9 1349 236 11 73 266 VIM-AS1,TRDMT1,VIM,CUBN
SE_02_067400451 chr10:17175242-17217271 Sample_02_0674 Endometrium E1_FA 451 8 1215 219 10 66 245 VIM-AS1,TRDMT1,VIM,CUBN
SE_02_154300253 chr10:17187657-17211247 Sample_02_1543 Gastrointestinal Stromal GIST-48 253 6 704 141 6 27 159 TRDMT1,VIM,VIM-AS1
SE_01_008800094 chr10:17189678-17240300 Sample_01_0088 Tibial nerve tibial-nerve 94 5 1469 184 7 170 989 VIM,TRDMT1
SE_02_118100766 chr10:17190970-17217145 Sample_02_1181 Brain GBM10 766 5 768 136 5 51 245 VIM-AS1,TRDMT1,VIM
SE_01_005700387 chr10:17195189-17220039 Sample_01_0057 Pancreas duct PANC-1 387 1 718 122 5 52 245 TRDMT1,VIM
SE_02_127200137 chr10:17195955-17218975 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 137 21 665 118 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_094901003 chr10:17196043-17218093 Sample_02_0949 Umbilical artery HUAEC_WT 1003 8 636 113 4 52 245 VIM-AS1,TRDMT1,VIM
SE_02_058000828 chr10:17196225-17217661 Sample_02_0580 Blood HEL_sgSIK3e4 828 5 616 109 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_072300186 chr10:17196396-17221586 Sample_02_0723 Pancreas MIAPaca2 WT 186 1 731 119 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_057600809 chr10:17196512-17218215 Sample_02_0576 Blood HEL_sgLKB1e2 809 5 626 111 4 52 245 VIM-AS1,TRDMT1,VIM
SE_02_057900783 chr10:17196561-17221209 Sample_02_0579 Blood HEL_sgNeg2 783 7 719 119 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_045300325 chr10:17196674-17219480 Sample_02_0453 Neuroblastoma SJNB3 325 1 658 116 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_098100094 chr10:17198064-17202632 Sample_02_0981 Brain H3.3K27M-KO_BT245-C4P6 94 1 134 28 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_097300110 chr10:17198243-17202639 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 110 1 127 25 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_103400742 chr10:17198497-17202713 Sample_02_1034 Blood AML cell 742 1 124 24 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_096500663 chr10:17198694-17202778 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 663 1 122 21 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_084600258 chr10:17198744-17219901 Sample_02_0846 Mammary gland MDA-MB-231_untreat 258 8 614 104 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_158401462 chr10:17198817-17202464 Sample_02_1584 Brain U87 GBM_Mock 1462 1 109 20 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_136800321 chr10:17198822-17203965 Sample_02_1368 Pancreas MIA PaCa-2-untreated 321 1 160 35 2 9 159 TRDMT1,VIM,VIM-AS1
SE_02_093100484 chr10:17198829-17202862 Sample_02_0931 Embryo H9 UTXKO 484 1 118 20 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_156601064 chr10:17198832-17202750 Sample_02_1566 Dermal Dermal fibroblast 1064 1 116 20 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_145200691 chr10:17198900-17202317 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 691 1 104 20 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_074500767 chr10:17198904-17212964 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 767 4 423 87 3 27 159 TRDMT1,VIM,VIM-AS1
SE_02_145100709 chr10:17198908-17202206 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 709 1 102 17 2 7 153 TRDMT1,VIM,VIM-AS1
SE_02_018000349 chr10:17198909-17230920 Sample_02_0180 melanoma CJM 349 8 946 122 5 112 697 VIM,TRDMT1
SE_01_009500825 chr10:17198925-17203558 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 825 1 150 31 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_044800256 chr10:17198936-17202810 Sample_02_0448 Bone MNNG 256 1 114 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_057100472 chr10:17198942-17218952 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 472 7 585 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_145500646 chr10:17198985-17202284 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 646 1 99 18 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_077101072 chr10:17198992-17218219 Sample_02_0771 Ovary OVCA429_shGRHL2 1072 10 559 97 4 52 245 VIM-AS1,TRDMT1,VIM
SE_02_018100357 chr10:17199008-17230817 Sample_02_0181 melanoma COLO679 357 6 939 121 5 111 688 VIM,TRDMT1
SE_02_126401572 chr10:17199020-17202380 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1572 1 102 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_145400723 chr10:17199030-17202269 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 723 1 98 18 2 7 159 TRDMT1,VIM,VIM-AS1
SE_00_001000708 chr10:17199048-17203141 Sample_00_0010 Embryo endodermal-cell 708 1 132 27 2 7 159 TRDMT1,VIM
SE_02_154800389 chr10:17199060-17217868 Sample_02_1548 Gastrointestinal Stromal GIST-226 389 11 551 97 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_093200656 chr10:17199064-17203433 Sample_02_0932 Embryo H9 WT_1 656 1 142 30 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_018500478 chr10:17199068-17230804 Sample_02_0185 Skin UACC257 478 7 938 121 5 111 687 VIM,TRDMT1
SE_02_086700837 chr10:17199090-17221359 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 837 17 654 105 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_150500194 chr10:17199096-17221319 Sample_02_1505 Brain SHEP with tetracycline inducible MYC_DOX_2HR 194 13 654 105 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_057000517 chr10:17199100-17218513 Sample_02_0570 Brain LN229_10_mM_glucose 517 6 567 99 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_153400245 chr10:17199102-17219263 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 245 6 589 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_130900620 chr10:17199130-17202608 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 620 1 107 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_124100693 chr10:17199141-17217250 Sample_02_1241 Skin MCC26_virus_negative 693 9 528 92 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_055600718 chr10:17199142-17217584 Sample_02_0556 iPSCs BOFS hiPSC cl1 718 2 539 93 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_074400315 chr10:17199148-17213240 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 315 7 426 87 3 27 159 TRDMT1,VIM,VIM-AS1
SE_02_072400251 chr10:17199153-17217741 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 251 3 541 94 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_083800424 chr10:17199163-17202656 Sample_02_0838 Embryo hNPCs_WT 424 1 107 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_093400538 chr10:17199165-17202822 Sample_02_0934 Embryo H7-WT 538 1 110 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_084700077 chr10:17199169-17219038 Sample_02_0847 Mammary gland LM2-4175 77 8 583 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_098200590 chr10:17199170-17202361 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 590 1 99 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_079900433 chr10:17199172-17218956 Sample_02_0799 Brain MESMN1 433 5 581 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_080100492 chr10:17199183-17217555 Sample_02_0801 Brain 2235 492 3 536 92 4 51 245 VIM-AS1,TRDMT1,VIM
SE_01_011700131 chr10:17199195-17219013 Sample_01_0117 Lung fibroblast of lung 131 4 582 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_098000264 chr10:17199203-17202244 Sample_02_0980 Brain BT245 264 1 94 16 2 7 158 TRDMT1,VIM,VIM-AS1
SE_02_130800774 chr10:17199205-17202640 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 774 1 106 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_137900799 chr10:17199213-17202481 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 799 1 102 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_132500601 chr10:17199216-17202062 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 601 1 88 15 2 7 135 TRDMT1,VIM,VIM-AS1
SE_02_053100199 chr10:17199216-17219071 Sample_02_0531 Mammary gland MDA-MB-231 199 8 582 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_072000333 chr10:17199218-17217603 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 333 3 537 93 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_143000213 chr10:17199221-17202558 Sample_02_1430 Blood Kasumi-3_mock-infected 213 1 105 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_126701181 chr10:17199225-17202534 Sample_02_1267 Bone Im-GCT-4072_G34W 1181 1 105 19 2 7 159 TRDMT1,VIM,VIM-AS1
SE_02_074100506 chr10:17199233-17219087 Sample_02_0741 Muscle RH30 506 7 582 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_043700419 chr10:17199245-17217499 Sample_02_0437 Bone 143B 419 6 534 92 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_158300853 chr10:17199247-17219008 Sample_02_1583 Fetal lung IMR90_empty_GM 853 11 581 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_062000213 chr10:17199249-17217609 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 213 4 538 93 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_063800754 chr10:17199252-17219502 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 754 9 592 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_027000166 chr10:17199254-17230895 Sample_02_0270 Kidney PCS-400 166 10 937 121 5 112 697 VIM,TRDMT1
SE_02_000800147 chr10:17199255-17230968 Sample_02_0008 Kidney 786-O_empty_vector 147 10 939 121 5 112 697 VIM,TRDMT1
SE_02_153600367 chr10:17199273-17218965 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 367 8 580 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_082400052 chr10:17199283-17219104 Sample_02_0824 Stomach LMSU 52 5 582 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_049800530 chr10:17199285-17219672 Sample_02_0498 Fetal lung IMR90 Senescent_1 530 8 593 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_084900161 chr10:17199287-17218995 Sample_02_0849 iPSCs iPSC_CBP-30 161 6 581 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_136400200 chr10:17199308-17219012 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 200 9 579 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_058800581 chr10:17199310-17221006 Sample_02_0588 Cervix HeLa Kyoto_untreated 581 8 640 103 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_084800078 chr10:17199313-17218992 Sample_02_0848 iPSCs iPSC_DMSO 78 8 579 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_153500324 chr10:17199314-17217829 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 324 6 544 96 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_153700667 chr10:17199334-17218697 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 667 6 569 101 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_114900477 chr10:17199339-17219012 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 477 6 579 102 5 52 245 VIM-AS1,TRDMT1,VIM
SE_02_000900303 chr10:17199349-17230883 Sample_02_0009 Kidney 786-O_wtVHL 303 8 935 121 5 112 697 VIM,TRDMT1
SE_02_131800315 chr10:17199351-17217594 Sample_02_1318 Brain hMGLs_SORL1-A528T 315 8 534 93 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_112900909 chr10:17199353-17217225 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 909 4 520 92 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_062200606 chr10:17199375-17221371 Sample_02_0622 Blood EOL1_Naive 606 10 647 105 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_046900131 chr10:17199401-17216970 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 131 10 512 91 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_131400358 chr10:17199480-17217664 Sample_02_1314 Brain hMGLs_TREM2-KO 358 7 535 94 4 51 245 VIM-AS1,TRDMT1,VIM
SE_02_023000047 chr10:17199488-17230621 Sample_02_0230 Umbilical cord ID60 47 9 922 121 5 108 661 VIM,TRDMT1
SE_02_082600966 chr10:17199502-17223971 Sample_02_0826 Stomach gastric tumor 966 12 721 110 5 56 245 VIM-AS1,TRDMT1,VIM
SE_02_048700206 chr10:17199678-17202219 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 206 1 83 16 2 7 155 TRDMT1,VIM,VIM-AS1
SE_02_048400256 chr10:17199714-17202003 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 256 1 71 12 0 7 134 TRDMT1,VIM,VIM-AS1
SE_02_131700422 chr10:17199828-17217520 Sample_02_1317 Brain hMGLs_SORL1-KO 422 9 517 90 3 51 245 VIM-AS1,TRDMT1,VIM
SE_02_071200665 chr10:17199828-17220797 Sample_02_0712 Pancreas BxPC3_sgNEG 665 5 617 101 4 53 245 VIM-AS1,TRDMT1,VIM
SE_02_048900164 chr10:17199889-17202258 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 164 1 77 16 1 7 159 TRDMT1,VIM,VIM-AS1
SE_02_048200165 chr10:17199895-17202089 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 165 1 70 13 1 7 137 TRDMT1,VIM,VIM-AS1
SE_02_131200407 chr10:17199921-17217573 Sample_02_1312 Brain hMGLs_WT 407 9 518 91 3 51 245 VIM-AS1,TRDMT1,VIM
SE_02_048500139 chr10:17199947-17202185 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 139 1 74 14 1 7 151 TRDMT1,VIM,VIM-AS1
SE_02_048300194 chr10:17199981-17202246 Sample_02_0483 Bone marrow HSCe_22y_CD34+,CD38-,Lineage- 194 1 74 14 1 7 158 TRDMT1,VIM,VIM-AS1
SE_02_151400787 chr10:17199984-17220836 Sample_02_1514 Lung Differentiated AT1-like cells 787 5 616 101 4 54 245 VIM-AS1,TRDMT1,VIM
SE_02_136600706 chr10:17200001-17220749 Sample_02_1366 Pancreas BxPC3-untreated 706 4 614 101 4 52 245 VIM-AS1,TRDMT1,VIM
SE_02_049000056 chr10:17200013-17202004 Sample_02_0490 Bone marrow HSCe_68y_CD34+,CD38-,Lineage- 56 1 64 11 0 7 134 TRDMT1,VIM,VIM-AS1
SE_02_021900061 chr10:17200040-17217303 Sample_02_0219 Mammary gland MDA-MB-231 61 4 504 89 3 51 245 TRDMT1,VIM
SE_02_127900373 chr10:17204989-17221614 Sample_02_1279 Bone Mesenchymal stem cells 373 1 479 64 3 43 86 VIM-AS1,VIM,TRDMT1
SE_02_143700964 chr10:17205369-17220557 Sample_02_1437 Liver LSEC-TNF 964 1 444 58 3 39 86 VIM-AS1,VIM,TRDMT1
SE_02_111300762 chr10:17205664-17221455 Sample_02_1113 Bone U2OS 762 6 460 58 3 41 86 VIM-AS1,VIM,TRDMT1
SE_02_046800081 chr10:17206329-17216962 Sample_02_0468 Kidney 786-O PBRM1 shRNA#1 81 5 296 36 2 38 86 VIM-AS1,VIM,TRDMT1
SE_02_157101009 chr10:17208019-17211382 Sample_02_1571 Fibroblast Fibroblast cells 1009 1 93 18 1 6 0 VIM,VIM-AS1,TRDMT1
Genomic distribution of SEs associated with TRDMT1
Genome Browser

The strength of the tissue affected by the gene

Expression of TRDMT1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)