Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_150500290 chr1:109808884-109839624 30740 290 7 920 66 5 63 0 EPS8L3
SE_02_150500010 chr1:125166840-125183858 17018 10 8 0 0 0 0 0
SE_02_150500001 chr1:143184661-143270857 86196 1 55 0 24 0 0 0 LOC645166
SE_02_150500070 chr1:156102744-156130352 27608 70 9 673 66 4 210 594 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_150500282 chr1:158002335-158021375 19040 282 7 500 16 3 106 0 KIRREL
SE_02_150500091 chr1:162661913-162697995 36082 91 17 1008 70 5 101 0 DDR2
SE_02_150500273 chr1:163163780-163175431 11651 273 5 333 11 1 45 45 LOC101928404,RGS5
SE_02_150500136 chr1:164630924-164654657 23733 136 11 661 6 5 247 240 PBX1
SE_02_150500202 chr1:164695757-164719364 23607 202 7 655 49 3 224 0 PBX1,LOC100505795
SE_02_150500013 chr1:164732605-164795225 62620 13 20 1644 36 3 362 475 LOC100505795,PBX1
SE_02_150500029 chr1:168427852-168512012 84160 29 25 2438 102 3 113 0 LOC101928565,LOC100505918,XCL2
SE_02_150500345 chr1:16894993-16906077 11084 345 6 491 43 0 0 64 RNVU1-18,CROCC
SE_02_150500139 chr1:170661918-170675452 13534 139 5 370 25 1 99 161 PRRX1
SE_02_150500236 chr1:170689177-170714779 25602 236 19 684 36 1 144 0 PRRX1
SE_02_150500244 chr1:172140030-172146965 6935 244 1 150 3 0 75 396 DNM3OS,DNM3,MIR199A2,MIR3120,MIR214
SE_02_150500235 chr1:172342443-172361325 18882 235 6 429 28 1 107 0 DNM3,C1ORF105
SE_02_150500266 chr1:172637213-172663237 26024 266 6 710 49 1 67 178 FASLG
SE_02_150500051 chr1:172894605-172971062 76457 51 28 1830 79 8 73 0 TNFSF18
SE_02_150500258 chr1:181077528-181112366 34838 258 10 928 51 4 268 542 IER5,MR1
SE_02_150500111 chr1:183267815-183281232 13417 111 10 365 14 1 52 161 NMNAT2
SE_02_150500281 chr1:184790347-184806098 15751 281 6 452 43 4 47 824 FAM129A,EDEM3
SE_02_150500014 chr1:192507043-192562873 55830 14 24 1409 55 6 90 0 RGS1
SE_02_150500232 chr1:200336054-200380750 44696 232 11 1075 99 5 113 273 LINC00862,ZNF281
SE_02_150500107 chr1:201436031-201462864 26833 107 9 780 84 10 45 0 TNNI1,PHLDA3,LAD1,CSRP1
SE_02_150500080 chr1:201535333-201563946 28613 80 13 800 44 0 117 0 CSRP1,RPS10P7
SE_02_150500038 chr1:201695636-201766778 71142 38 28 1921 109 3 335 571 NAV1,MIR5191,IPO9-AS1,MIR1231
SE_02_150500017 chr1:203504933-203570994 66061 17 17 2046 97 3 152 142 OPTC,PRELP
SE_02_150500274 chr1:204409493-204439765 30272 274 7 756 53 3 133 1718 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628
SE_02_150500155 chr1:214399529-214431338 31809 155 18 975 29 2 67 176 PTPN14,SMYD2
SE_02_150500223 chr1:214557134-214588293 31159 223 11 878 41 3 41 0 CENPF,PTPN14
SE_02_150500130 chr1:218459466-218499845 40379 130 15 1025 27 21 189 0 MIR548F3,TGFB2-OT1
SE_02_150500122 chr1:221856547-221897976 41429 122 15 1125 53 8 151 0 LOC101929771
SE_02_150500309 chr1:221979523-222008188 28665 309 13 700 46 3 38 0 LOC101929771
SE_02_150500344 chr1:231393904-231421285 27381 344 9 773 160 0 18 120 EGLN1
SE_02_150500077 chr1:234584629-234632451 47822 77 19 1315 83 5 0 855 IRF2BP2,LINC00184,LOC101927787
SE_02_150500044 chr1:234956866-234999190 42324 44 17 1304 62 4 179 308 LOC101927851
SE_02_150500333 chr1:50973542-50981566 8024 333 6 166 6 1 61 124 CDKN2C,FAF1
SE_02_150500165 chr1:55700148-55727219 27071 165 10 775 27 2 108 0 MIR4422,LOC100507634
SE_02_150500283 chr1:59007479-59027818 20339 283 8 606 40 11 46 0 LINC01358
SE_02_150500116 chr1:59117155-59165794 48639 116 12 1373 86 5 126 263 HSD52
SE_02_150500141 chr1:59352251-59395545 43294 141 13 1391 62 7 129 40 FGGY
SE_02_150500049 chr1:59408573-59455873 47300 49 21 1257 35 1 93 0 FGGY
SE_02_150500149 chr1:59595584-59646114 50530 149 15 1510 29 2 129 297 FGGY
SE_02_150500252 chr1:66242042-66274967 32925 252 10 849 15 3 200 156 PDE4B
SE_02_150500174 chr1:66333401-66374881 41480 174 12 1011 12 8 247 642 PDE4B
SE_02_150500074 chr1:7281873-7304144 22271 74 8 644 8 2 59 0 CAMTA1,VAMP3
SE_02_150500106 chr1:76005196-76068994 63798 106 20 1674 240 15 21 0 LOC101927342,ST6GALNAC3
SE_02_150500250 chr1:8077099-8098695 21596 250 11 537 25 1 81 0 ERRFI1
SE_02_150500123 chr1:84345372-84380681 35309 123 13 855 32 3 76 361 SAMD13,UOX,DNASE2B
SE_02_150500129 chr1:84692850-84750789 57939 129 15 1439 95 1 46 0 SSX2IP
SE_02_150500071 chr1:93661779-93709135 47356 71 11 1130 74 3 205 455 BCAR3
SE_02_150500279 chr1:93798613-93828641 30028 279 12 724 99 1 21 0 BCAR3,MIR760
SE_02_150500050 chr1_KI270709v1_random:13-17478 17465 50 16 0 0 0 0 0
SE_02_150500207 chr10:108773163-108818466 45303 207 16 1535 0 0 33 0 LINC01435
SE_02_150500194 chr10:17199096-17221319 22223 194 13 654 105 5 54 245 VIM-AS1,TRDMT1,VIM
SE_02_150500119 chr10:42066500-42102260 35760 119 13 0 29 0 0 0 LOC441666
SE_02_150500095 chr10:43856594-43892624 36030 95 12 1066 100 2 120 338 LINC00840,LINC00619,LINC00841
SE_02_150500087 chr10:4661906-4706164 44258 87 15 1293 32 4 58 91 LINC00705,LINC00704
SE_02_150500343 chr10:4762384-4778887 16503 343 8 483 16 2 35 0 AKR1E2
SE_02_150500147 chr10:68072995-68104023 31028 147 11 788 78 1 73 214 HERC4,MYPN
SE_02_150500261 chr10:76303412-76332144 28732 261 13 746 47 2 191 54 C10ORF11,KCNMA1-AS1
SE_02_150500240 chr10:76381539-76409369 27830 240 9 740 22 4 166 0 C10ORF11,KCNMA1-AS1
SE_02_150500043 chr10:77155411-77195295 39884 43 20 1011 32 4 136 116 KCNMA1,KCNMA1-AS2
SE_02_150500197 chr10:77347995-77359197 11202 197 5 325 13 2 23 118 KCNMA1,KCNMA1-AS3
SE_02_150500046 chr10:77500466-77534273 33807 46 13 891 58 0 75 0 KCNMA1
SE_02_150500269 chr10:79112866-79159386 46520 269 8 1379 14 10 187 194 ZMIZ1,ZMIZ1-AS1
SE_02_150500114 chr10:89938831-89983198 44367 114 19 1127 40 3 108 118 LINC01375
SE_02_150500004 chr10:90167272-90233815 66543 4 25 1922 31 10 112 0 LINC01375
SE_02_150500196 chr10:90304050-90327931 23881 196 9 632 5 3 45 0 LOC101926942
SE_02_150500332 chr10:90579464-90593870 14406 332 10 364 18 3 46 0 LOC101926942
SE_02_150500304 chr10:90855068-90863675 8607 304 4 190 13 0 101 269 HTR7,RPP30
SE_02_150500060 chr10:91567718-91617933 50215 60 13 1424 193 4 136 107 HECTD2-AS1,PPP1R3C
SE_02_150500034 chr10:93435863-93479779 43916 34 20 1273 167 6 104 149 MYOF,CEP55
SE_02_150500118 chr10:99775454-99789531 14077 118 4 342 54 2 3 122 ABCC2,CUTC,COX15
SE_02_150500033 chr10:99962837-100009835 46998 33 21 1219 166 0 52 158 DNMBP,DNMBP-AS1
SE_02_150500166 chr11:11976266-11999300 23034 166 10 757 81 5 65 48 DKK3
SE_02_150500221 chr11:12065951-12090650 24699 221 8 798 77 3 74 0 MICAL2
SE_02_150500045 chr11:12149281-12205322 56041 45 16 1761 111 7 156 213 MICAL2,MIR6124
SE_02_150500199 chr11:122137481-122160523 23042 199 8 627 7 2 123 125 MIR100,MIRLET7A2,MIR100HG,MIR125B1,BLID
SE_02_150500226 chr11:122177258-122201848 24590 226 15 644 17 3 127 31 MIR100HG,MIR100,MIRLET7A2
SE_02_150500151 chr11:12675904-12695887 19983 151 12 526 3 1 105 0 TEAD1
SE_02_150500125 chr11:13110712-13141575 30863 125 13 1038 131 6 62 0 RASSF10,LINC00958
SE_02_150500008 chr11:13205270-13269937 64667 8 23 1824 139 17 186 0 ARNTL
SE_02_150500124 chr11:13315301-13341780 26479 124 10 691 25 6 93 133 ARNTL
SE_02_150500089 chr11:34970565-35014883 44318 89 16 1227 175 3 80 170 PDHX,MIR1343
SE_02_150500081 chr11:35063663-35116312 52649 81 13 1569 115 6 106 0 LOC100507144,CD44
SE_02_150500066 chr11:35139283-35184172 44889 66 18 1371 86 15 259 205 CD44,LOC100507144
SE_02_150500322 chr11:46272444-46299600 27156 322 9 664 27 2 171 247 CREB3L1,DGKZ
SE_02_150500182 chr11:59536951-59560959 24008 182 12 669 39 0 2 423 OR4D9,MIR3162,OR4D11
SE_02_150500159 chr11:62426243-62445061 18818 159 7 543 89 5 56 96 AHNAK,SCGB1A1
SE_02_150500117 chr11:62539672-62557497 17825 117 8 413 30 1 177 185 AHNAK,EEF1G,TUT1,MTA2,MIR6747
SE_02_150500213 chr11:65419238-65430872 11634 213 7 319 13 1 32 1124 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_150500018 chr11:65471615-65506860 35245 18 21 1020 108 4 50 963 MALAT1,SCYL1,NEAT1,MIR612
SE_02_150500276 chr11:75554874-75564122 9248 276 4 252 25 2 38 487 SERPINH1,GDPD5
SE_02_150500297 chr12:114903310-114937222 33912 297 14 985 13 28 93 0 TBX3
SE_02_150500219 chr12:121924446-121950984 26538 219 13 678 114 25 35 265 WDR66,PSMD9,HPD
SE_02_150500217 chr12:126481806-126518838 37032 217 8 1206 42 2 16 0 LOC100128554
SE_02_150500335 chr12:13194327-13212158 17831 335 7 506 30 1 69 103 EMP1
SE_02_150500248 chr12:18995718-19031926 36208 248 7 1074 15 10 73 0 PLEKHA5
SE_02_150500113 chr12:19833584-19870039 36455 113 16 1082 14 3 84 0 LOC100506393
SE_02_150500320 chr12:20474437-20505108 30671 320 13 843 5 1 24 0 PDE3A
SE_02_150500150 chr12:27609472-27644934 35462 150 20 1020 141 2 55 177 PPFIBP1,REP15
SE_02_150500257 chr12:31731632-31751754 20122 257 14 555 51 0 0 0 H3F3C,AMN1
SE_02_150500224 chr12:46384052-46405207 21155 224 9 598 55 0 42 0 LOC100288798,SLC38A2
SE_02_150500133 chr12:46430263-46475216 44953 133 16 1103 88 1 103 0 LOC100288798
SE_02_150500179 chr12:52175681-52203280 27599 179 8 885 84 1 93 516 KRT80,LINC00592,KRT7,C12ORF80
SE_02_150500170 chr12:6323598-6346316 22718 170 10 668 53 14 118 1468 TNFRSF1A,PLEKHG6,LTBR,SCNN1A
SE_02_150500249 chr12:65490158-65504769 14611 249 6 397 15 0 21 0 LOC100507065
SE_02_150500108 chr12:65519132-65538417 19285 108 9 552 13 3 77 0 LOC100507065
SE_02_150500102 chr12:65602186-65635200 33014 102 15 877 44 2 149 0 LOC100507065
SE_02_150500188 chr12:65648387-65675522 27135 188 12 747 27 0 124 0 LOC100507065
SE_02_150500156 chr12:65818467-65842904 24437 156 7 555 10 4 139 715 RPSAP52,HMGA2,LOC100129940
SE_02_150500084 chr12:72267786-72297573 29787 84 10 750 34 1 224 516 TRHDE-AS1,TRHDE
SE_02_150500006 chr12:75657810-75793137 135327 6 48 3809 139 9 323 68 KRR1
SE_02_150500178 chr12:75812041-75836512 24471 178 13 662 13 3 71 0 PHLDA1
SE_02_150500265 chr12:76015401-76029352 13951 265 9 378 5 1 36 348 PHLDA1
SE_02_150500256 chr12:80033217-80054245 21028 256 8 513 21 4 45 0 PPP1R12A
SE_02_150500030 chr13:40101495-40169672 68177 30 31 1892 22 8 275 0 LINC00332
SE_02_150500310 chr13:97249989-97277056 27067 310 13 673 17 5 97 73 MBNL2
SE_02_150500047 chr14:49971614-50024856 53242 47 15 1479 126 6 83 955 LINC01588,LINC01599,MIR6076
SE_02_150500298 chr14:51283615-51310479 26864 298 9 761 74 3 70 0 LINC00640,TMX1
SE_02_150500184 chr14:51393166-51410391 17225 184 4 477 23 7 50 0 LINC00640
SE_02_150500069 chr14:51424145-51474569 50424 69 22 1482 46 11 97 66 FRMD6-AS2,FRMD6
SE_02_150500012 chr14:51505927-51564811 58884 12 27 1644 84 8 134 138 FRMD6-AS2,FRMD6
SE_02_150500192 chr14:52024139-52062079 37940 192 11 1269 214 6 93 704 NID2,C14ORF166
SE_02_150500319 chr14:52074944-52083080 8136 319 3 215 28 1 16 0 NID2
SE_02_150500187 chr14:59253677-59309953 56276 187 19 1482 200 2 180 367 DAAM1
SE_02_150500016 chr14:61493134-61620934 127800 16 27 3549 165 39 363 1489 LOC101927780,FLJ22447,PRKCH
SE_02_150500079 chr14:65229303-65262314 33011 79 11 1013 100 6 40 0 LOC100128233
SE_02_150500115 chr14:68124917-68148846 23929 115 12 596 28 1 164 0 RAD51B
SE_02_150500019 chr14:68164012-68213417 49405 19 25 1144 33 39 259 0 RAD51B
SE_02_150500053 chr14:68228661-68290129 61468 53 19 1492 41 16 283 82 RAD51B
SE_02_150500134 chr14:68458826-68488943 30117 134 14 650 29 0 0 166 RAD51B,ZFP36L1
SE_02_150500242 chr14:68508862-68521434 12572 242 6 302 12 2 88 0 RAD51B,ZFP36L1
SE_02_150500143 chr14:68535649-68555067 19418 143 11 435 26 2 143 0 RAD51B,ZFP36L1
SE_02_150500100 chr14:68663103-68703581 40478 100 16 1139 41 9 200 0 ZFP36L1
SE_02_150500189 chr14:76947463-76962712 15249 189 7 406 29 0 81 0 IRF2BPL
SE_02_150500241 chr14:77025418-77040156 14738 241 7 415 20 6 293 847 IRF2BPL,LOC283575,LOC102724190
SE_02_150500132 chr15:36356381-36375632 19251 132 12 552 1 4 257 0 C15ORF41
SE_02_150500023 chr15:37090609-37134683 44074 23 11 1071 7 3 514 790 MEIS2
SE_02_150500215 chr15:48855645-48898439 42794 215 10 1039 69 8 80 556 EID1,SHC4,CEP152
SE_02_150500109 chr15:60359451-60403003 43552 109 14 1169 86 6 144 465 ANXA2
SE_02_150500121 chr15:62758182-62783566 25384 121 11 810 10 0 105 546 TLN2,MIR190A
SE_02_150500331 chr15:62875150-62899953 24803 331 9 810 57 6 51 0 MIR190A
SE_02_150500205 chr15:62920631-62942269 21638 205 7 737 50 3 26 0 MIR190A
SE_02_150500037 chr15:63040605-63114545 73940 37 17 2334 305 10 308 1671 TPM1,RPS27L,LACTB
SE_02_150500200 chr15:70775857-70812196 36339 200 15 1111 108 0 53 0 LRRC49,LARP6,UACA
SE_02_150500005 chr16:34571551-34596145 24594 5 17 0 2 0 0 0 LINC00273
SE_02_150500002 chr16:46380677-46401651 20974 2 8 543 0 0 0 0 ANKRD26P1,SHCBP1
SE_02_150500212 chr16:86661015-86681649 20634 212 8 821 69 8 28 0 FOXL1
SE_02_150500065 chr17:13336764-13367377 30613 65 14 886 20 3 77 0 MIR548H3
SE_02_150500135 chr17:13581869-13600529 18660 135 10 510 13 2 86 50 HS3ST3A1,MIR548H3
SE_02_150500315 chr17:2067270-2091242 23972 315 9 695 52 3 367 600 SMG6,DPH1,RTN4RL1,HIC1,MIR132,MIR212,OVCA2
SE_02_150500334 chr17:48959416-48974594 15178 334 6 447 48 1 30 405 GIP,SNF8,IGF2BP1
SE_02_150500284 chr17:48990831-48999649 8818 284 3 184 10 1 151 305 IGF2BP1,SNF8,GIP
SE_02_150500027 chr17:50026549-50065873 39324 27 24 1145 74 7 204 1094 ITGA3,LOC284080,PDK2,DLX3
SE_02_150500099 chr17:50205701-50220637 14936 99 8 418 24 1 34 0 LOC101927230,SGCA,HILS1,COL1A1
SE_02_150500198 chr17:57867835-57893849 26014 198 11 745 55 6 160 818 CUEDC1,MRPS23
SE_02_150500057 chr17:59825440-59853294 27854 57 9 607 54 1 114 260 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_150500075 chr17:61138653-61168319 29666 75 10 707 18 2 251 45 BCAS3,TBX2-AS1
SE_02_150500245 chr17:61247088-61255944 8856 245 4 201 8 1 105 0 BCAS3,TBX2-AS1
SE_02_150500028 chr17:61284393-61339581 55188 28 15 1460 21 7 351 0 BCAS3,TBX2-AS1
SE_02_150500096 chr17:61397371-61408792 11421 96 7 319 23 2 250 1563 TBX2,TBX2-AS1,C17ORF82,TBX4
SE_02_150500316 chr17:71176360-71190905 14545 316 9 468 0 4 104 38 CASC17
SE_02_150500254 chr17:75680357-75701014 20657 254 14 549 24 4 44 355 SAP30BP,SMIM5,ITGB4,SMIM6,RECQL5
SE_02_150500259 chr17:78315840-78353927 38087 259 9 1185 10 2 168 0 LOC100996291,LOC101928674,PGS1,SOCS3
SE_02_150500278 chr17_KI270729v1_random:880-6012 5132 278 2 0 0 0 0 0
SE_02_150500120 chr18:48924000-48960256 36256 120 10 1047 17 8 431 596 SMAD7
SE_02_150500085 chr18:68417806-68495609 77803 85 23 2225 7 15 0 0 TMX3
SE_02_150500222 chr19:13152158-13173393 21235 222 10 568 40 2 94 519 IER2,STX10,LYL1,TRMT1,NACC1
SE_02_150500330 chr19:38682996-38694246 11250 330 7 306 46 2 53 0 ACTN4
SE_02_150500307 chr2:100280986-100293467 12481 307 10 344 54 0 17 412 LONRF2
SE_02_150500253 chr2:101432890-101464840 31950 253 11 933 226 5 40 81 RFX8,CREG2
SE_02_150500325 chr2:102034015-102065309 31294 325 9 979 102 4 54 0 IL1R2,IL1R1
SE_02_150500342 chr2:112625475-112641874 16399 342 7 464 63 0 50 23 FLJ42351,CHCHD5,SLC20A1
SE_02_150500164 chr2:142036760-142071926 35166 164 15 936 70 0 106 0 LRP1B
SE_02_150500076 chr2:142099919-142140297 40378 76 14 1119 93 4 126 219 LRP1B
SE_02_150500328 chr2:142863483-142880839 17356 328 8 414 26 0 25 52 KYNU
SE_02_150500068 chr2:160204575-160252320 47745 68 17 1323 94 5 142 83 ITGB6,LOC100505984
SE_02_150500105 chr2:160372402-160434831 62429 105 19 1435 92 3 225 177 MIR4785,RBMS1
SE_02_150500295 chr2:162240357-162262261 21904 295 9 616 53 1 99 81 FAP
SE_02_150500138 chr2:172231502-172257156 25654 138 10 618 38 1 116 0 DLX2-AS1
SE_02_150500022 chr2:181774996-181819586 44590 22 14 1211 24 0 127 0 SSFA2
SE_02_150500007 chr2:181886159-181960296 74137 7 27 1796 7 3 287 1208 SSFA2,PPP1R1C
SE_02_150500340 chr2:189253401-189298869 45468 340 14 1153 114 1 46 0 COL5A2
SE_02_150500158 chr2:189373634-189413034 39400 158 9 992 89 1 37 0 WDR75
SE_02_150500148 chr2:205691180-205714624 23444 148 18 626 17 1 218 99 NRP2
SE_02_150500168 chr2:226113453-226137837 24384 168 8 671 15 3 72 0 LOC646736,MIR5702
SE_02_150500042 chr2:226601490-226683720 82230 42 24 2422 20 1 295 48 MIR5702
SE_02_150500011 chr2:237171153-237237679 66526 11 21 1932 114 2 101 0 COPS8
SE_02_150500036 chr2:237278619-237326812 48193 36 22 1543 22 5 59 192 COL6A3
SE_02_150500293 chr2:237410307-237441956 31649 293 7 927 60 2 53 98 COL6A3,MLPH
SE_02_150500303 chr2:29108395-29131122 22727 303 8 593 19 0 34 367 CLIP4,C2ORF71
SE_02_150500128 chr2:33412108-33440143 28035 128 13 1012 22 1 42 46 MIR4430,RASGRP3
SE_02_150500338 chr2:43074101-43087219 13118 338 7 479 11 2 66 0 LOC102723854
SE_02_150500301 chr2:43423752-43469294 45542 301 14 1299 112 13 148 92 THADA
SE_02_150500272 chr2:46846450-46859090 12640 272 7 459 33 0 35 347 LINC01119,LINC01118
SE_02_150500112 chr2:71813380-71849288 35908 112 14 1008 2 2 148 0 CYP26B1
SE_02_150500146 chr2:74560013-74594216 34203 146 20 725 41 2 62 772 M1AP,DOK1,TLX2,DQX1,HTRA2,AUP1,LOXL3
SE_02_150500260 chr2:80459703-80499198 39495 260 9 1115 5 2 107 0 CTNNA2
SE_02_150500208 chr20:10350402-10388878 38476 208 17 1114 112 1 39 0 MKKS,SLX4IP
SE_02_150500048 chr20:1375759-1434775 59016 48 19 1519 237 8 35 488 FKBP1A,FKBP1A-SDCBP2,MIR6869,SDCBP2-AS1,NSFL1C,SDCBP2
SE_02_150500204 chr20:22374527-22414287 39760 204 13 1219 67 3 123 192 LOC284788
SE_02_150500160 chr20:23142430-23161743 19313 160 15 629 38 6 41 0 LINC00656
SE_02_150500296 chr20:38163044-38187704 24660 296 13 791 95 3 32 143 TGM2
SE_02_150500231 chr20:4063392-4085724 22332 231 12 693 111 29 37 0 RNF24
SE_02_150500088 chr20:47349794-47372934 23140 88 7 629 8 4 134 726 ZMYND8,LOC100131496
SE_02_150500220 chr20:7836822-7859784 22962 220 10 632 7 5 143 0 HAO1
SE_02_150500300 chr21:24679895-24695250 15355 300 11 457 2 2 21 0 LOC339622,MIR155
SE_02_150500176 chr21:25171573-25198654 27081 176 8 745 54 1 37 0 LINC00158,MIR155
SE_02_150500302 chr22:36350353-36371453 21100 302 12 634 35 2 39 81 MYH9
SE_02_150500031 chr22:46055692-46084704 29012 31 18 816 38 3 206 402 PRR34-AS1,PRR34,MIR3619,LINC00899,LOC730668,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_150500086 chr3:10191540-10225372 33832 86 16 1113 122 2 28 561 IRAK2,TATDN2,VHL
SE_02_150500218 chr3:112671194-112699742 28548 218 14 772 46 4 39 0 CCDC80,LOC101929694
SE_02_150500314 chr3:114399973-114418804 18831 314 11 466 11 1 255 0 ZBTB20,LOC101929754,ZBTB20-AS1
SE_02_150500271 chr3:124247641-124284608 36967 271 9 998 58 15 127 218 KALRN,MIR6083,MIR5002
SE_02_150500063 chr3:139298510-139317677 19167 63 6 529 15 3 0 0 MRPS22
SE_02_150500267 chr3:141361068-141387054 25986 267 8 609 30 7 121 228 ZBTB38
SE_02_150500318 chr3:149374070-149391437 17367 318 9 488 28 1 40 181 TM4SF1-AS1,TM4SF1,TM4SF18
SE_02_150500104 chr3:151894792-151934093 39301 104 11 1079 118 1 71 0 AADACL2-AS1,SUCNR1
SE_02_150500055 chr3:157070833-157132436 61603 55 12 1650 104 10 246 675 LINC00880,LINC00881,CCNL1
SE_02_150500287 chr3:15782713-15817090 34377 287 8 877 79 11 95 104 ANKRD28
SE_02_150500324 chr3:160661193-160679719 18526 324 5 462 61 0 4 155 ARL14
SE_02_150500214 chr3:169085494-169120016 34522 214 11 907 16 4 325 484 MECOM
SE_02_150500270 chr3:169143336-169153094 9758 270 3 226 1 1 151 489 MECOM
SE_02_150500152 chr3:169218128-169245182 27054 152 8 622 12 1 311 0 MECOM
SE_02_150500024 chr3:170689261-170768743 79482 24 19 1943 104 9 84 267 RPL22L1
SE_02_150500154 chr3:172126246-172154224 27978 154 15 722 5 3 95 33 FNDC3B
SE_02_150500246 chr3:190031593-190078216 46623 246 12 1464 163 14 128 0 P3H2,P3H2-AS1
SE_02_150500239 chr3:55159297-55204141 44844 239 13 1342 30 10 174 0 LRTM1
SE_02_150500206 chr3:59100550-59142288 41738 206 12 1100 28 2 56 0 C3ORF67
SE_02_150500190 chr3:59234718-59268844 34126 190 16 911 6 0 151 0 C3ORF67
SE_02_150500097 chr3:59423826-59454305 30479 97 12 1028 6 11 83 0 C3ORF67
SE_02_150500032 chr3:59502327-59574752 72425 32 32 2216 23 10 194 0 C3ORF67
SE_02_150500180 chr3:64340165-64356183 16018 180 5 482 9 3 82 0 PRICKLE2
SE_02_150500336 chr3:98960674-98982643 21969 336 11 539 78 0 50 0 DCBLD2
SE_02_150500093 chr4:124930465-124953958 23493 93 13 647 23 1 17 0 ANKRD50
SE_02_150500191 chr4:128513629-128554334 40705 191 14 1029 96 1 127 139 LOC100507487
SE_02_150500234 chr4:138227071-138255563 28492 234 9 710 31 2 93 189 SLC7A11
SE_02_150500255 chr4:140078675-140117340 38665 255 9 1002 31 5 164 0 MAML3
SE_02_150500061 chr4:156941303-156977909 36606 61 13 949 10 3 251 214 PDGFC
SE_02_150500101 chr4:157992300-158052433 60133 101 20 1415 102 2 97 0 FAM198B
SE_02_150500056 chr4:173508534-173533264 24730 56 16 663 16 2 269 773 HAND2-AS1,HAND2
SE_02_150500311 chr4:174152551-174175278 22727 311 8 635 23 2 76 0 LOC101928509
SE_02_150500059 chr4:174193658-174221050 27392 59 13 717 29 6 175 31 LOC101928509
SE_02_150500094 chr4:174256142-174287176 31034 94 11 686 39 1 71 258 CEP44,FBXO8,LOC101928509
SE_02_150500243 chr4:176768771-176794768 25997 243 13 671 54 0 96 261 VEGFC
SE_02_150500306 chr4:38131954-38163983 32029 306 10 877 22 4 91 314 TBC1D1
SE_02_150500153 chr4:47208499-47223050 14551 153 4 407 20 1 38 0 GABRB1
SE_02_150500090 chr4:47333920-47387485 53565 90 23 1578 47 2 108 0 GABRB1,COMMD8
SE_02_150500067 chr4:49709244-49712000 2756 67 3 0 0 0 0 0 CWH43,OCIAD2
SE_02_150500054 chr4:80219101-80257090 37989 54 11 1029 99 6 76 0 FGF5,PRDM8
SE_02_150500183 chr5:119386558-119418804 32246 183 13 926 84 4 80 162 TNFAIP8,HSD17B4
SE_02_150500003 chr5:135992424-136060434 68010 3 22 1947 105 28 258 1257 TGFBI,VTRNA2-1,LECT2
SE_02_150500339 chr5:139653054-139668954 15900 339 6 363 12 0 213 0 CXXC5
SE_02_150500142 chr5:145553621-145592002 38381 142 14 1078 3 0 123 0 PRELID2
SE_02_150500163 chr5:149125541-149174961 49420 163 12 1264 91 4 192 232 ABLIM3
SE_02_150500186 chr5:150137695-150160909 23214 186 8 646 68 0 123 184 PDGFRB,CDX1,SLC6A7,CSF1R
SE_02_150500126 chr5:150762911-150791514 28603 126 14 723 85 5 60 273 SMIM3,DCTN4
SE_02_150500337 chr5:169647619-169669907 22288 337 6 588 34 1 46 108 DOCK2
SE_02_150500285 chr5:169685240-169707209 21969 285 13 633 28 2 117 496 DOCK2
SE_02_150500021 chr5:33298573-33376326 77753 21 26 2142 179 3 142 0 TARS
SE_02_150500039 chr5:49615491-49666632 51141 39 10 0 3 0 0 0 EMB,PARP8
SE_02_150500181 chr5:53004355-53042006 37651 181 14 904 126 3 69 38 ITGA2
SE_02_150500291 chr5:57432761-57444088 11327 291 7 313 10 0 41 0 ACTBL2
SE_02_150500167 chr5:57486978-57506045 19067 167 12 550 24 2 80 0 ACTBL2
SE_02_150500228 chr5:60482299-60504184 21885 228 13 481 30 1 99 287 PART1,PDE4D
SE_02_150500327 chr5:61275709-61324055 48346 327 13 1190 100 1 350 0 ZSWIM6
SE_02_150500137 chr5:73310709-73339186 28477 137 15 791 51 0 94 0 FOXD1
SE_02_150500078 chr5:78586125-78641261 55136 78 17 1505 70 1 142 347 LHFPL2
SE_02_150500308 chr5:81166497-81186443 19946 308 10 500 22 5 17 43 RASGRF2,CKMT2,CKMT2-AS1
SE_02_150500238 chr5:82386727-82414826 28099 238 9 707 52 5 96 0 ATP6AP1L
SE_02_150500169 chr5:87112388-87136598 24210 169 9 606 35 9 56 104 MIR4280,LOC101929380
SE_02_150500195 chr5:9431551-9469663 38112 195 12 1139 48 11 99 51 SEMA5A,CTD-2201E9.1
SE_02_150500262 chr5:95698053-95734003 35950 262 7 837 83 1 52 415 RHOBTB3,SPATA9
SE_02_150500230 chr6:106512562-106529108 16546 230 11 466 66 1 79 519 AIM1
SE_02_150500210 chr6:110324385-110339443 15058 210 7 431 28 3 39 0 METTL24,DDO
SE_02_150500216 chr6:113350350-113385715 35365 216 14 932 45 1 100 0 LOC101927686
SE_02_150500326 chr6:140040865-140083431 42566 326 12 987 24 1 361 74 LOC100507477,LOC103352541
SE_02_150500341 chr6:142372619-142388929 16310 341 11 429 17 10 47 69 ADGRG6,VTA1
SE_02_150500185 chr6:158025682-158062186 36504 185 13 1166 72 2 68 863 SYNJ2,SYNJ2-IT1
SE_02_150500323 chr6:158631642-158656000 24358 323 7 673 61 1 38 776 SYTL3,DYNLT1,TMEM181,MIR7161
SE_02_150500299 chr6:25034118-25056597 22479 299 6 651 107 1 39 105 FAM65B
SE_02_150500177 chr6:45424013-45454441 30428 177 13 781 49 1 224 89 RUNX2,SUPT3H
SE_02_150500225 chr6:56328741-56372470 43729 225 20 1166 93 9 49 0 COL21A1
SE_02_150500233 chr6:84616848-84653242 36394 233 10 1130 109 11 125 0 LOC102724201,TBX18
SE_02_150500264 chr7:116674538-116725159 50621 264 15 1214 69 6 266 324 MET
SE_02_150500203 chr7:129831050-129865770 34720 203 13 812 72 1 87 702 UBE2H,MIR183
SE_02_150500025 chr7:130884981-130921183 36202 25 19 1112 63 5 113 118 LOC100506860,LINC-PINT,MIR29A,MIR29B1
SE_02_150500289 chr7:130937265-130962777 25512 289 11 589 45 0 79 159 LINC-PINT,LOC100506860
SE_02_150500173 chr7:130994376-131013577 19201 173 7 484 20 3 59 62 LINC-PINT,LOC100506860
SE_02_150500247 chr7:136998397-137025882 27485 247 10 691 36 4 133 285 CHRM2,LOC349160,MIR490
SE_02_150500073 chr7:137129003-137161503 32500 73 15 939 32 0 46 0 LOC349160
SE_02_150500294 chr7:137536150-137545452 9302 294 3 280 11 1 9 0 DGKI,PTN
SE_02_150500083 chr7:137954044-138000466 46422 83 16 1235 24 2 96 176 LOC100130880,CREB3L2
SE_02_150500321 chr7:143487463-143522960 35497 321 12 1030 170 4 139 624 EPHA1-AS1,TAS2R60,TAS2R41,CTAGE15
SE_02_150500131 chr7:16963073-16993092 30019 131 10 956 37 5 72 0 AGR3,AGR2
SE_02_150500052 chr7:17007662-17059491 51829 52 13 1669 30 7 117 0 AGR3,AGR2
SE_02_150500171 chr7:17520761-17546835 26074 171 11 977 27 7 60 0 LOC101927630
SE_02_150500209 chr7:17600644-17652592 51948 209 13 1806 93 2 64 0 LOC101927630
SE_02_150500172 chr7:18748205-18779315 31110 172 11 1023 28 6 186 116 HDAC9
SE_02_150500082 chr7:18958133-19024774 66641 82 18 2154 52 15 198 184 HDAC9,TWIST1
SE_02_150500110 chr7:19095049-19113089 18040 110 12 585 0 1 233 0 TWIST1,FERD3L
SE_02_150500058 chr7:27097829-27116429 18600 58 11 422 43 9 464 1272 HOXA2,HOXA3,HOTAIRM1,HOXA-AS3,HOXA5,HOXA-AS2,HOXA7,HOXA1,HOXA4,HOXA9,HOXA6
SE_02_150500064 chr7:43625599-43675321 49722 64 19 1228 196 1 0 824 COA1,STK17A
SE_02_150500092 chr7:47757573-47792389 34816 92 15 1074 104 4 55 300 PKD1L1,LINC00525,C7ORF69
SE_02_150500103 chr8:107421384-107462862 41478 103 21 1064 50 10 175 0 ANGPT1
SE_02_150500263 chr8:121317610-121357741 40131 263 12 1046 0 3 57 0 HAS2-AS1
SE_02_150500288 chr8:29846194-29861942 15748 288 9 422 14 3 24 0 LOC101929470
SE_02_150500251 chr8:32318679-32345397 26718 251 11 733 106 2 105 0 NRG1,NRG1-IT3
SE_02_150500157 chr8:38830547-38875098 44551 157 11 1096 91 5 47 919 TACC1,PLEKHA2
SE_02_150500062 chr8:38888107-38939543 51436 62 15 1337 89 4 0 336 PLEKHA2,HTRA4
SE_02_150500175 chr8:42195847-42215660 19813 175 11 576 46 0 34 107 PLAT,AP3M2
SE_02_150500211 chr8:42232855-42268536 35681 211 11 1035 96 0 1 0 LOC101929897,PLAT,IKBKB
SE_02_150500144 chr8:61707460-61734455 26995 144 10 735 38 1 36 238 ASPH,MIR4470
SE_02_150500201 chr8:61756564-61790050 33486 201 8 1026 44 1 9 373 ASPH,MIR4470
SE_02_150500072 chr8:66506889-66551546 44657 72 21 1264 45 1 132 476 C8ORF46
SE_02_150500015 chr8:94011382-94083867 72485 15 29 2025 137 4 117 0 PDP1
SE_02_150500229 chr8:94241072-94262225 21153 229 14 630 33 3 102 430 GEM,CDH17
SE_02_150500162 chr8:98147047-98179257 32210 162 13 931 60 2 51 474 POP1,HRSP12
SE_02_150500140 chr8:98357811-98382411 24600 140 10 637 13 6 58 0 KCNS2,NIPAL2
SE_02_150500305 chr9:108034189-108058747 24558 305 12 692 15 4 92 0 KLF4
SE_02_150500317 chr9:110742715-110778035 35320 317 12 841 37 3 49 227 MUSK,SVEP1
SE_02_150500040 chr9:125509662-125567545 57883 40 26 1454 66 5 503 175 MAPKAP1
SE_02_150500313 chr9:12695431-12723768 28337 313 7 870 80 6 133 337 TYRP1,LURAP1L-AS1
SE_02_150500280 chr9:127555783-127575091 19308 280 8 522 83 2 99 220 FAM129B,STXBP1
SE_02_150500026 chr9:129458560-129507287 48727 26 18 1447 87 0 143 874 LINC00963
SE_02_150500277 chr9:130824094-130860705 36611 277 7 1011 68 5 82 274 ABL1,QRFP
SE_02_150500237 chr9:18476150-18495054 18904 237 7 659 34 1 125 0 ADAMTSL1
SE_02_150500020 chr9:21542852-21616904 74052 20 27 2256 32 11 210 166 MIR31HG,MIR31
SE_02_150500098 chr9:21670384-21690947 20563 98 6 800 45 10 69 0 MIR31HG
SE_02_150500286 chr9:37998871-38048654 49783 286 14 1531 125 12 157 93 SHB
SE_02_150500161 chr9:73115168-73156852 41684 161 14 1142 56 4 90 28 ANXA1
SE_02_150500227 chr9:76650703-76701360 50657 227 17 1302 107 11 69 214 PRUNE2
SE_02_150500035 chr9:88731791-88791558 59767 35 15 1864 58 3 50 52 MIR4289
SE_02_150500312 chr9:88809094-88829773 20679 312 7 665 19 0 30 0 MIR4289
SE_02_150500127 chr9:94860125-94885882 25757 127 13 630 26 2 82 0 C9ORF3,MIR2278
SE_02_150500193 chr9:95003806-95025745 21939 193 8 556 31 0 68 569 C9ORF3,MIR6081
SE_02_150500292 chrUn_KI270333v1:9-2633 2624 292 3 0 0 0 0 0
SE_02_150500009 chrUn_KI270438v1:101411-112398 10987 9 5 0 0 0 0 0
SE_02_150500041 chrUn_KI270467v1:1095-3920 2825 41 2 0 0 0 0 0
SE_02_150500268 chrX:10614268-10636404 22136 268 12 349 17 0 155 111 MID1
SE_02_150500275 chrX:10675413-10699698 24285 275 9 390 26 0 55 73 MID1
SE_02_150500329 chrX:134664057-134693339 29282 329 16 455 9 0 118 0 PLAC1
SE_02_150500145 chrX:45741911-45782568 40657 145 24 739 16 1 184 83 MIR222,MIR221,LOC392452

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2572344
Input ID: Name:GSM2572345
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb