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Function introduction:
Based on the tissue query, users can query the super-enhancer for all samples of a particular type of tissue.

Parameter explanation:
1) Biosample type: Cell type classification of samples.
2) Tissue name: Select the tissue of interest.

For example

Function introduction:
Users submit a gene and analyze super-enhancers associated with it via relationships between the super-enhancer and associated genes identified under different strategies are obtained from indeterminate samples.

Parameter explanation:
1) Strategies/Algorithm: The closest active, ROSE overlap, ROSE proximal, ROSE closest, Lasso and PreSTIGE.
2) Gene symbol: Only gene symbol can be supported.

Please click here to start the selection

Function introduction:
In the sample-based advanced query, users determine the scope of the super-enhancer query by determining the sample and genome location for the results of interest.

Parameter explanation:
1) Biosample type: Cell type classification of samples.
2) Tissue type: Samples tissue type.
3) Data sources: Sources of sample, including ENCODE, Roadmap, NCBI GEO/SRA and GGR.
4) Biosample name: Biosample name is made of cell/tissue/cell line name, treatment condition, processing time, etc.
5) Chromosome: Chromosome.
6) Start position: The super-enhancer is at the start of the chromosome.
7) End position: The super-enhancer is at the end of the chromosome.


Features: