Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_049700262 chr1:109369960-109377103 7143 262 4 186 15 1 18 0 SORT1,PSMA5
SE_02_049700294 chr1:120143375-120162364 18989 294 8 230 22 0 11 0 SEC22B
SE_02_049700215 chr1:12447664-12462078 14414 215 4 337 2 0 65 134 VPS13D,SNORA59A
SE_02_049700100 chr1:158006677-158023956 17279 100 6 443 11 4 96 0 KIRREL
SE_02_049700217 chr1:169110059-169121049 10990 217 10 323 23 1 26 58 ATP1B1,LINC00970
SE_02_049700002 chr1:172898479-172969876 71397 2 32 1716 75 6 64 0 TNFSF18,TNFSF4
SE_02_049700198 chr1:193322582-193338664 16082 198 4 400 12 0 11 0 LINC01031
SE_02_049700181 chr1:198258066-198273090 15024 181 4 344 17 1 47 32 NEK7
SE_02_049700265 chr1:201903466-201918140 14674 265 4 436 43 4 33 0 LMOD1,MIR6739,SHISA4,TIMM17A
SE_02_049700111 chr1:202578307-202590185 11878 111 9 294 12 0 47 1080 PPP1R12B
SE_02_049700195 chr1:205285927-205302749 16822 195 10 473 41 6 46 132 NUAK2,TMCC2
SE_02_049700184 chr1:214427536-214448263 20727 184 4 542 32 2 11 0 PTPN14
SE_02_049700076 chr1:223699506-223722993 23487 76 6 632 99 2 58 419 CAPN2,CAPN8
SE_02_049700095 chr1:234603514-234620478 16964 95 5 485 32 1 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_049700245 chr1:238647554-238658728 11174 245 5 321 0 2 0 0 LINC01139,ZP4
SE_02_049700257 chr1:39388406-39407223 18817 257 3 413 30 0 85 41 MACF1,KIAA0754
SE_02_049700163 chr1:43468056-43482452 14396 163 9 312 15 1 0 0 HYI,MIR6735,PTPRF
SE_02_049700054 chr1:55696678-55724352 27674 54 9 801 35 2 114 0 MIR4422,LOC100507634
SE_02_049700208 chr1:58746274-58764124 17850 208 5 485 34 0 46 0 JUN,LINC01135,MYSM1
SE_02_049700287 chr1:77510025-77515290 5265 287 6 132 10 2 10 0 AK5,ZZZ3
SE_02_049700073 chr1:8078700-8098537 19837 73 8 494 24 1 75 0 ERRFI1
SE_02_049700153 chr1:8116268-8137247 20979 153 5 696 103 1 41 0 LOC102724539
SE_02_049700090 chr1:8201407-8232771 31364 90 9 1076 56 5 23 0 LOC102724539,SLC45A1
SE_02_049700052 chr1:85314599-85332726 18127 52 10 441 63 43 58 365 DDAH1,BCL10,LOC646626
SE_02_049700218 chr1:89893839-89912170 18331 218 4 488 19 0 39 0 LRRC8D
SE_02_049700011 chr1:94624011-94677971 53960 11 19 1538 89 3 84 123 LINC01057,MIR378G,F3,ABCD3
SE_02_049700019 chr1:94690525-94740566 50041 19 14 1498 166 1 105 134 LINC01057,MIR378G
SE_02_049700322 chr10:103038384-103045900 7516 322 7 164 18 0 45 0 CNNM2
SE_02_049700284 chr10:110057527-110078087 20560 284 4 543 19 0 62 0 ADD3,ADD3-AS1
SE_02_049700172 chr10:14395625-14407961 12336 172 7 429 14 0 27 0 MIR4293,MIR1265
SE_02_049700235 chr10:17058841-17076307 17466 235 4 475 32 0 40 163 CUBN,TRDMT1
SE_02_049700222 chr10:17664608-17674981 10373 222 4 327 29 0 3 0 STAM,HACD1,STAM-AS1
SE_02_049700324 chr10:30055740-30063693 7953 324 5 193 5 0 23 133 KIAA1462
SE_02_049700096 chr10:33113869-33131279 17410 96 5 482 26 3 88 0 ITGB1
SE_02_049700156 chr10:3451571-3478600 27029 156 9 884 4 3 61 0 LOC105376360,PITRM1
SE_02_049700256 chr10:4662786-4685543 22757 256 4 658 16 2 24 27 LINC00704,LINC00705
SE_02_049700320 chr10:4767678-4772572 4894 320 4 141 6 1 24 0 AKR1E2
SE_02_049700326 chr10:62038125-62046691 8566 326 5 206 7 3 48 0 ARID5B
SE_02_049700022 chr10:62224444-62246134 21690 22 11 485 47 2 51 165 RTKN2
SE_02_049700091 chr10:93460088-93476833 16745 91 9 500 80 5 43 0 MYOF,CEP55
SE_02_049700269 chr11:100875614-100882695 7081 269 5 209 9 0 6 0 ARHGAP42,TMEM133
SE_02_049700191 chr11:10591170-10605200 14030 191 5 380 39 0 72 520 MRVI1,MRVI1-AS1,LYVE1,RNF141
SE_02_049700248 chr11:10655545-10666925 11380 248 6 336 32 0 33 0 MRVI1
SE_02_049700226 chr11:10894116-10909377 15261 226 5 376 34 1 46 101 ZBED5-AS1,ZBED5
SE_02_049700135 chr11:111554269-111563302 9033 135 9 263 17 3 26 359 LAYN,C11ORF88,BTG4,SIK2,MIR34B,MIR34C
SE_02_049700089 chr11:12067659-12088089 20430 89 6 664 68 2 62 0 MICAL2,DKK3
SE_02_049700212 chr11:122035396-122044553 9157 212 7 252 9 1 48 0 MIR125B1
SE_02_049700012 chr11:122178996-122212917 33921 12 15 855 17 2 168 146 MIR100HG,MIR100,MIRLET7A2
SE_02_049700082 chr11:123165812-123189870 24058 82 6 714 23 1 76 0 CLMP
SE_02_049700304 chr11:128487579-128508195 20616 304 3 558 4 0 186 133 ETS1,MIR6090,LOC101929517
SE_02_049700072 chr11:132052385-132074508 22123 72 9 744 32 8 120 0 NTM
SE_02_049700171 chr11:23896484-23904195 7711 171 6 230 0 0 0 0 MIR8054
SE_02_049700142 chr11:28833185-28838570 5385 142 7 165 1 1 14 0 MIR8068
SE_02_049700005 chr11:29287163-29329989 42826 5 14 1095 1 0 157 0 KCNA4,MIR8068
SE_02_049700238 chr11:34973412-34979213 5801 238 6 155 29 0 4 19 PDHX,MIR1343
SE_02_049700199 chr11:35540216-35554810 14594 199 7 446 63 0 31 0 PAMR1
SE_02_049700337 chr11:46289763-46300196 10433 337 4 260 7 1 68 86 CREB3L1,DGKZ
SE_02_049700329 chr11:5279939-5291270 11331 329 5 344 27 3 27 35 OR51B2,HBG1,HBD,HBBP1,BGLT3,OR51B4,HBG2,HBE1
SE_02_049700192 chr11:5334211-5345397 11186 192 5 396 20 1 4 217 OR51B5,OR51M1,OR51B2,OR51B4,OR51B6
SE_02_049700173 chr11:5362416-5369262 6846 173 7 305 89 1 0 0 OR51B5,OR51M1,OR51B2,OR51B6
SE_02_049700193 chr11:65419317-65426814 7497 193 8 205 7 1 31 645 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_049700048 chr11:65491235-65505965 14730 48 10 471 22 3 34 893 MALAT1,SCYL1,MIR612
SE_02_049700162 chr11:74132677-74141840 9163 162 8 202 15 0 24 193 C2CD3,PPME1
SE_02_049700286 chr11:7966233-7983609 17376 286 5 468 34 2 3 0 OR10A3,NLRP10,CASC23,OR10A6,EIF3F
SE_02_049700109 chr11:85704991-85725726 20735 109 4 597 50 0 157 621 SYTL2,CREBZF,CCDC89,CCDC83,AP000974.1
SE_02_049700296 chr11:8825363-8838037 12674 296 6 354 39 3 41 78 ST5
SE_02_049700243 chr11:96149640-96164296 14656 243 4 402 13 2 55 0 MAML2,MIR1260B
SE_02_049700242 chr11:9903806-9908847 5041 242 6 138 29 6 32 0 SBF2,LOC101928008
SE_02_049700188 chr12:108681603-108694019 12416 188 6 300 25 2 48 0 CORO1C,MIR4496,SELPLG
SE_02_049700200 chr12:108825226-108839472 14246 200 3 406 18 1 19 97 SSH1,MIR619,DAO
SE_02_049700292 chr12:109945155-109952897 7742 292 4 159 9 0 28 343 GIT2,TCHP,ANKRD13A
SE_02_049700333 chr12:114401348-114412232 10884 333 4 332 3 3 85 1078 TBX5-AS1,TBX5
SE_02_049700224 chr12:114677580-114686864 9284 224 5 246 2 3 138 572 TBX3
SE_02_049700305 chr12:46548681-46556171 7490 305 4 172 11 2 13 0 LOC100288798
SE_02_049700201 chr12:49222993-49245603 22610 201 5 586 40 0 42 62 TUBA1C,TUBA1A,PRPH
SE_02_049700266 chr12:64178803-64188119 9316 266 4 257 10 0 8 0 C12ORF66,C12orf66
SE_02_049700018 chr12:65526288-65567568 41280 18 16 1106 40 1 191 177 LOC100507065
SE_02_049700325 chr12:76019689-76029951 10262 325 3 269 4 1 28 382 PHLDA1
SE_02_049700231 chr12:76259234-76278577 19343 231 7 528 41 0 31 0 BBS10
SE_02_049700259 chr12:79408771-79421547 12776 259 5 289 30 4 51 35 SYT1,MIR1252
SE_02_049700065 chr12:80578841-80595357 16516 65 9 424 8 0 53 48 PTPRQ,MYF6
SE_02_049700308 chr12:88299961-88310104 10143 308 4 266 22 1 4 0 TMTC3
SE_02_049700185 chr12:91317223-91328660 11437 185 7 256 21 0 21 0 DCN
SE_02_049700079 chr12:93777259-93788571 11312 79 9 305 17 2 17 0 CRADD,LOC101928731
SE_02_049700071 chr12:95633114-95654720 21606 71 9 632 23 1 72 53 PGAM1P5,NTN4,RP11-536G4.1
SE_02_049700204 chr13:109244031-109258698 14667 204 5 419 35 1 27 0 MYO16-AS1
SE_02_049700317 chr13:110247221-110257037 9816 317 6 290 7 2 18 0 COL4A1
SE_02_049700047 chr13:110320753-110360670 39917 47 8 1254 19 6 106 44 MIR8073,COL4A2,COL4A1
SE_02_049700017 chr13:110380632-110404729 24097 17 21 762 40 6 68 0 COL4A2,MIR8073,COL4A1
SE_02_049700239 chr13:113177002-113189017 12015 239 6 341 13 0 22 423 PCID2,CUL4A,PROZ,F10-AS1
SE_02_049700174 chr13:113896779-113909291 12512 174 5 330 28 1 0 215 LINC00452,GAS6-AS2,GAS6,LINC00565
SE_02_049700160 chr13:114109657-114130789 21132 160 8 683 70 2 32 0 RASA3
SE_02_049700288 chr13:23672935-23681669 8734 288 7 321 21 1 14 261 TNFRSF19
SE_02_049700121 chr13:32211326-32226352 15026 121 8 369 10 1 21 237 FRY,ZAR1L
SE_02_049700132 chr13:41611046-41631046 20000 132 8 497 15 1 61 143 VWA8,MIR5006
SE_02_049700158 chr13:44711440-44727011 15571 158 6 419 11 0 17 0 LINC00330
SE_02_049700246 chr13:87086450-87094080 7630 246 5 224 13 13 0 0 LINC00430
SE_02_049700077 chr13:95258617-95281121 22504 77 10 641 68 6 20 143 ABCC4
SE_02_049700159 chr14:49974877-50000074 25197 159 5 678 48 1 36 257 LINC01588,MIR6076
SE_02_049700127 chr14:51539129-51563346 24217 127 7 669 27 1 47 104 FRMD6-AS2,FRMD6
SE_02_049700029 chr14:52044889-52080244 35355 29 10 1019 131 5 116 599 NID2
SE_02_049700254 chr14:52109686-52125126 15440 254 4 430 33 1 6 0 NID2
SE_02_049700274 chr14:56324132-56338986 14854 274 6 447 34 0 0 0 PELI2
SE_02_049700118 chr14:61552142-61567084 14942 118 10 435 24 4 35 740 LOC101927780,FLJ22447
SE_02_049700323 chr14:69069830-69080668 10838 323 4 238 13 0 25 35 DCAF5
SE_02_049700124 chr14:80619966-80639450 19484 124 7 526 33 3 17 0 CEP128,DIO2
SE_02_049700020 chr15:32824606-32873592 48986 20 20 1608 48 12 163 66 FMN1,LOC100131315
SE_02_049700064 chr15:33093945-33115279 21334 64 9 830 85 1 40 0 FMN1
SE_02_049700046 chr15:39124647-39141675 17028 46 12 516 2 0 48 0 C15ORF54,C15orf54
SE_02_049700027 chr15:39165436-39199896 34460 27 10 993 28 1 96 0 C15ORF54,C15orf54
SE_02_049700272 chr15:39299559-39304151 4592 272 4 154 11 0 43 0 C15ORF54
SE_02_049700034 chr15:40981902-41017347 35445 34 12 946 59 0 102 530 INO80,CHAC1
SE_02_049700283 chr15:63045293-63052761 7468 283 5 211 23 1 57 616 TPM1
SE_02_049700128 chr15:67091662-67117408 25746 128 7 738 41 4 85 0 SMAD3
SE_02_049700303 chr15:71047449-71054266 6817 303 4 168 10 0 18 89 LRRC49,CT62
SE_02_049700049 chr15:71280621-71301250 20629 49 9 554 29 5 53 0 THSD4,THSD4-AS1
SE_02_049700028 chr15:71315855-71333838 17983 28 11 572 32 7 45 0 THSD4,THSD4-AS1
SE_02_049700026 chr15:80477931-80496003 18072 26 13 498 5 2 99 0 ARNT2,LOC101929586
SE_02_049700179 chr15:92802291-92820350 18059 179 6 579 18 0 21 0 ASB9P1
SE_02_049700058 chr15:98877862-98903522 25660 58 7 865 14 3 112 391 IGF1R,MIR4714
SE_02_049700023 chr15_KI270905v1_alt:5038620-5086352 47732 23 19 0 0 0 0 0 FMN1
SE_02_049700169 chr16:10993540-11016497 22957 169 6 775 61 12 38 93 CLEC16A
SE_02_049700313 chr16:11078416-11090789 12373 313 4 396 30 12 42 0 CLEC16A
SE_02_049700115 chr16:24975610-24995724 20114 115 7 567 61 3 43 90 ARHGAP17,LOC554206
SE_02_049700119 chr16:27235505-27258351 22846 119 6 588 65 7 21 198 NSMCE1,FLJ21408,KDM8
SE_02_049700220 chr16:29262697-29277535 14838 220 7 529 75 0 0 0 SNX29P2,NPIPB11
SE_02_049700045 chr16:84972322-85005513 33191 45 10 1278 159 4 49 820 ZDHHC7,KIAA0513
SE_02_049700253 chr16:86506416-86514807 8391 253 3 286 18 2 0 758 FENDRR,FOXF1,MTHFSD,FLJ30679
SE_02_049700094 chr16:88234991-88265525 30534 94 9 1218 46 2 14 0 LOC101928880
SE_02_049700078 chr17:12593076-12629292 36216 78 7 975 1 1 86 0 LINC00670,MYOCD
SE_02_049700297 chr17:13583110-13594888 11778 297 5 344 12 1 31 0 HS3ST3A1,MIR548H3
SE_02_049700228 chr17:48481830-48497118 15288 228 6 409 64 1 90 0 LOC101927166,HOXB-AS1,HOXB1,HOXB2
SE_02_049700097 chr17:50196478-50211855 15377 97 12 462 17 3 123 785 COL1A1,SGCA,HILS1,LOC101927230,PPP1R9B
SE_02_049700107 chr17:57867874-57893034 25160 107 6 724 52 6 129 818 CUEDC1,MRPS23
SE_02_049700087 chr17:59753878-59764703 10825 87 7 220 27 2 25 0 VMP1,PTRH2
SE_02_049700214 chr17:59782717-59788336 5619 214 8 109 14 0 33 0 VMP1,MIR21
SE_02_049700013 chr17:59828486-59856885 28399 13 10 656 58 2 106 260 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_049700103 chr17:64658385-64684016 25631 103 9 632 52 1 91 265 SMURF2
SE_02_049700203 chr17:66459043-66470648 11605 203 6 336 17 0 4 0 PRKCA,PRKCA-AS1
SE_02_049700285 chr17:66542455-66551252 8797 285 5 281 7 1 20 0 PRKCA,PRKCA-AS1,MIR634
SE_02_049700189 chr17:69757182-69764168 6986 189 9 167 3 0 53 0 LINC01483
SE_02_049700244 chr17:80780956-80794833 13877 244 5 454 33 0 12 42 RPTOR,LOC101928855
SE_02_049700062 chr18:29154526-29166168 11642 62 9 304 0 0 39 0 CDH2
SE_02_049700268 chr18:29179926-29184110 4184 268 7 124 0 0 0 0
SE_02_049700068 chr18:45941854-45962560 20706 68 6 616 63 0 28 420 EPG5
SE_02_049700291 chr18:57778845-57788751 9906 291 5 279 10 1 16 0 ATP8B1
SE_02_049700230 chr18:58563791-58581170 17379 230 5 496 70 1 56 260 ALPK2
SE_02_049700332 chr18:9632909-9647293 14384 332 4 483 42 5 0 0 PPP4R1-AS1,PPP4R1,RAB31
SE_02_049700331 chr19:37996634-38003142 6508 331 9 186 10 0 24 0 SIPA1L3
SE_02_049700233 chr19:38651881-38666890 15009 233 5 425 45 0 92 0 ACTN4,EIF3K,MAP4K1
SE_02_049700101 chr2:102094553-102129042 34489 101 6 1116 121 25 79 0 IL1R1
SE_02_049700031 chr2:105374674-105406017 31343 31 10 903 77 1 81 510 FHL2,TGFBRAP1,C2ORF49
SE_02_049700330 chr2:140879930-140893238 13308 330 5 355 0 4 31 103 LRP1B,MIR7157
SE_02_049700232 chr2:157174206-157182797 8591 232 4 192 6 0 40 0 GALNT5
SE_02_049700164 chr2:160376087-160393259 17172 164 4 436 20 2 22 0 RBMS1,MIR4785
SE_02_049700251 chr2:166233910-166241242 7332 251 4 204 14 0 6 31 LOC101929680,SCN9A,SCN1A
SE_02_049700306 chr2:172641187-172648383 7196 306 6 222 23 0 6 0 PDK1
SE_02_049700016 chr2:174762222-174808483 46261 16 9 1227 63 3 127 420 CHRNA1,CHN1
SE_02_049700280 chr2:187544446-187550424 5978 280 3 110 13 0 0 0 TFPI
SE_02_049700137 chr2:189268129-189287566 19437 137 4 498 54 1 20 0 COL5A2
SE_02_049700281 chr2:191351972-191368129 16157 281 4 447 25 1 40 145 MYO1B
SE_02_049700134 chr2:191619605-191637840 18235 134 8 504 48 2 50 0 NABP1
SE_02_049700150 chr2:196323226-196336028 12802 150 6 331 9 2 31 175 HECW2
SE_02_049700267 chr2:201853269-201865669 12400 267 6 309 19 0 85 179 CDK15
SE_02_049700059 chr2:207236175-207259694 23519 59 6 558 39 2 131 5 LOC101927865,MIR1302-4
SE_02_049700335 chr2:215429992-215438599 8607 335 3 225 36 10 79 412 FN1,LOC102724849
SE_02_049700033 chr2:217216727-217232792 16065 33 12 414 17 3 28 0 LOC101928327
SE_02_049700112 chr2:217274914-217288339 13425 112 9 387 22 6 70 190 DIRC3,LOC101928327
SE_02_049700140 chr2:225091084-225104474 13390 140 6 376 31 0 20 0 DOCK10
SE_02_049700299 chr2:226183161-226188391 5230 299 4 139 10 0 22 0 LOC646736
SE_02_049700300 chr2:226424896-226432099 7203 300 6 212 8 2 10 0 MIR5702
SE_02_049700152 chr2:226476790-226490991 14201 152 5 384 8 4 71 0 MIR5702
SE_02_049700060 chr2:226747304-226772161 24857 60 9 633 28 4 69 0 IRS1
SE_02_049700141 chr2:231158957-231174317 15360 141 6 354 24 1 45 280 PSMD1,ARMC9,HTR2B
SE_02_049700229 chr2:23412512-23431148 18636 229 6 580 27 2 0 0 KLHL29
SE_02_049700003 chr2:237165196-237227782 62586 3 29 1768 109 2 86 0 COPS8,AC112721.1,AC112715.2
SE_02_049700009 chr2:237253915-237295008 41093 9 12 1237 28 2 69 0 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_049700271 chr2:27795214-27804162 8948 271 6 222 26 2 37 0 RBKS,MRPL33
SE_02_049700130 chr2:28275258-28301980 26722 130 4 677 34 2 144 49 BRE,LOC100505716
SE_02_049700161 chr2:30225850-30244126 18276 161 5 537 9 6 35 521 LBH
SE_02_049700063 chr2:30288788-30302636 13848 63 8 410 19 0 57 0 LOC285043,LBH
SE_02_049700221 chr2:30407647-30421542 13895 221 6 399 34 3 63 97 LCLAT1
SE_02_049700260 chr2:30655337-30667431 12094 260 5 403 28 3 31 0 CAPN13,LCLAT1
SE_02_049700007 chr2:36456964-36493299 36335 7 22 1322 68 4 149 174 CRIM1
SE_02_049700206 chr2:36560823-36570038 9215 206 3 310 23 1 18 19 FEZ2
SE_02_049700032 chr2:37683958-37713360 29402 32 9 919 30 1 47 0 CDC42EP3
SE_02_049700120 chr2:37766033-37781791 15758 120 7 571 18 7 88 0 LINC00211
SE_02_049700069 chr2:39491562-39524392 32830 69 7 877 45 1 121 292 LOC728730
SE_02_049700102 chr2:40096841-40105395 8554 102 10 231 14 2 42 26 SLC8A1-AS1
SE_02_049700116 chr2:45999146-46010594 11448 116 7 376 8 0 44 229 PRKCE,EPAS1
SE_02_049700147 chr2:46064627-46077567 12940 147 6 372 6 2 26 0 PRKCE,EPAS1
SE_02_049700264 chr2:46847526-46859993 12467 264 7 465 41 0 28 217 LINC01119,LINC01118
SE_02_049700183 chr2:47183110-47199821 16711 183 3 461 6 0 71 0 LOC101927043,CALM2,C2ORF61
SE_02_049700186 chr2:66436962-66446983 10021 186 6 224 9 1 206 503 MEIS1-AS2,MEIS1,MEIS1-AS3
SE_02_049700084 chr2:66863423-66875138 11715 84 6 313 20 1 62 0 LOC102724321,LOC101060019
SE_02_049700219 chr2:69237095-69253546 16451 219 5 419 13 0 53 503 ANTXR1,MIR3126
SE_02_049700144 chr2:75588425-75605499 17074 144 4 475 48 0 9 0 EVA1A,MRPL19
SE_02_049700151 chr2:87449336-87457818 8482 151 6 171 15 0 27 82 LINC00152
SE_02_049700307 chr20:11809855-11822656 12801 307 3 379 19 1 48 0 LINC00687,BTBD3
SE_02_049700282 chr20:4505765-4513620 7855 282 5 219 12 2 25 0 PRNP
SE_02_049700314 chr20:53581071-53593366 12295 314 4 305 3 0 60 275 ZNF217,LOC101927770
SE_02_049700240 chr20:56433060-56443407 10347 240 6 271 22 3 14 152 CASS4,CSTF1,AURKA,RTFDC1
SE_02_049700167 chr21:15000469-15010913 10444 167 6 265 9 0 159 0 NRIP1
SE_02_049700194 chr21:37848070-37855376 7306 194 8 187 1 3 0 0 KCNJ6
SE_02_049700311 chr21:45033959-45051969 18010 311 4 546 38 1 22 0 ADARB1,LINC00163,LINC00162,SSR4P1
SE_02_049700043 chr21:46033326-46066280 32954 43 13 1273 88 1 20 0 COL6A2
SE_02_049700166 chr22:27857846-27867931 10085 166 6 211 17 0 13 62 PITPNB
SE_02_049700037 chr22:30178256-30208487 30231 37 7 714 91 13 206 0 LIF
SE_02_049700098 chr22:31155937-31178559 22622 98 9 551 54 1 45 132 RNF185,MIR3928,INPP5J,LIMK2,SELM,PLA2G3
SE_02_049700207 chr22:36325550-36337870 12320 207 8 362 10 4 55 451 MYH9,MIR6819
SE_02_049700336 chr3:102174979-102181196 6217 336 4 164 0 0 13 0 LOC152225
SE_02_049700178 chr3:105354222-105370887 16665 178 6 412 27 0 94 264 ALCAM
SE_02_049700170 chr3:110412460-110420904 8444 170 6 243 7 1 16 0 PVRL3-AS1
SE_02_049700099 chr3:112379715-112398042 18327 99 5 485 32 1 25 0 CD200
SE_02_049700249 chr3:112648963-112654887 5924 249 4 143 5 0 14 0 LINC01279,CCDC80
SE_02_049700093 chr3:112670856-112695484 24628 93 8 644 40 4 39 0 CCDC80
SE_02_049700057 chr3:123727646-123751428 23782 57 7 646 10 1 74 603 MYLK,MYLK-AS2
SE_02_049700176 chr3:127782122-127804540 22418 176 6 630 26 2 46 0 MGLL
SE_02_049700067 chr3:141361870-141386187 24317 67 10 569 28 6 95 198 ZBTB38
SE_02_049700050 chr3:141399683-141415002 15319 50 15 346 12 4 58 188 ZBTB38,RASA2
SE_02_049700122 chr3:150236125-150253025 16900 122 6 405 15 0 72 0 LINC01213
SE_02_049700327 chr3:15633601-15646916 13315 327 3 423 39 0 50 422 BTD,HACL1
SE_02_049700263 chr3:159765835-159777577 11742 263 3 275 15 1 47 0 IQCJ-SCHIP1,SCHIP1,IQCJ-SCHIP1-AS1
SE_02_049700114 chr3:16058802-16070245 11443 114 9 312 33 2 25 0 GALNT15
SE_02_049700055 chr3:16088807-16113929 25122 55 9 723 31 3 2 0 GALNT15
SE_02_049700155 chr3:170744362-170755023 10661 155 10 240 18 2 12 71 RPL22L1,SLC7A14,EIF5A2
SE_02_049700241 chr3:188265354-188272452 7098 241 7 192 6 6 37 0 LPP
SE_02_049700295 chr3:190337821-190357769 19948 295 5 729 84 0 17 0 CLDN1,CLDN16
SE_02_049700039 chr3:192876762-192901311 24549 39 11 869 67 5 53 0 MB21D2
SE_02_049700146 chr3:29683980-29696860 12880 146 5 377 0 1 17 0 RBMS3,RBMS3-AS1
SE_02_049700255 chr3:30648561-30660106 11545 255 5 320 31 1 12 65 TGFBR2
SE_02_049700123 chr3:45056195-45065955 9760 123 14 281 36 0 4 0 CLEC3B
SE_02_049700056 chr3:45116759-45140520 23761 56 8 668 48 2 25 51 CDCP1
SE_02_049700008 chr3:55159884-55199984 40100 8 18 1188 30 7 147 0 LRTM1
SE_02_049700092 chr3:55466686-55485176 18490 92 5 459 12 0 215 753 WNT5A
SE_02_049700236 chr3:81740841-81745648 4807 236 5 105 5 1 39 34 GBE1
SE_02_049700328 chr3:86791982-86795885 3903 328 5 91 0 0 26 0 VGLL3
SE_02_049700318 chr3:8883927-8889610 5683 318 6 170 14 0 0 0 RAD18
SE_02_049700042 chr4:113945190-113976024 30834 42 5 790 32 6 56 0 ARSJ
SE_02_049700126 chr4:114269621-114282385 12764 126 4 330 15 0 3 0 ARSJ
SE_02_049700006 chr4:118986585-119040864 54279 6 16 1419 113 6 181 1135 SYNPO2,MYOZ2
SE_02_049700210 chr4:119517220-119526520 9300 210 4 206 26 0 20 103 PDE5A,LOC645513
SE_02_049700247 chr4:128856152-128872967 16815 247 4 440 11 1 158 746 JADE1
SE_02_049700081 chr4:150223917-150239666 15749 81 10 425 24 2 25 125 DCLK2
SE_02_049700187 chr4:156771342-156780685 9343 187 8 214 8 2 21 108 PDGFC
SE_02_049700321 chr4:156939950-156947076 7126 321 3 201 2 0 23 0 PDGFC
SE_02_049700010 chr4:168844915-168887363 42448 10 14 974 75 11 96 329 PALLD
SE_02_049700149 chr4:176262647-176273308 10661 149 4 269 18 0 38 54 ASB5,SPCS3
SE_02_049700197 chr4:38948333-38967818 19485 197 7 648 42 3 42 104 TMEM156
SE_02_049700261 chr4:47524855-47532637 7782 261 5 213 14 0 6 34 ATP10D
SE_02_049700074 chr4:76736014-76755634 19620 74 9 514 26 2 82 1062 SHROOM3,SOWAHB
SE_02_049700138 chr4:7891401-7911880 20479 138 8 735 94 2 53 0 AFAP1,LOC389199
SE_02_049700270 chr4:80234523-80240953 6430 270 6 184 13 2 15 0 FGF5,PRDM8
SE_02_049700298 chr5:13993391-14012108 18717 298 4 570 101 1 44 0 DNAH5
SE_02_049700053 chr5:14034284-14057304 23020 53 12 819 45 4 37 0 TRIO
SE_02_049700025 chr5:14161388-14194140 32752 25 9 918 50 3 66 67 TRIO
SE_02_049700315 chr5:142617827-142624863 7036 315 3 222 12 0 15 70 FGF1
SE_02_049700157 chr5:149403561-149423967 20406 157 4 662 44 3 88 1267 MIR143HG,MIR143,PCYOX1L,GRPEL2-AS1,IL17B,MIR145
SE_02_049700106 chr5:151681018-151699999 18981 106 6 504 38 2 55 389 CTB-113P19.1,SPARC
SE_02_049700225 chr5:157371313-157387488 16175 225 7 425 58 4 13 117 CYFIP2,FNDC9
SE_02_049700202 chr5:157541641-157550230 8589 202 6 238 22 3 16 0 ADAM19
SE_02_049700136 chr5:159179550-159191888 12338 136 5 315 8 0 12 40 RNF145
SE_02_049700258 chr5:172887387-172903548 16161 258 6 488 18 1 31 197 ERGIC1,DUSP1
SE_02_049700223 chr5:34487721-34533753 46032 223 6 1411 142 3 44 0 RAI14
SE_02_049700312 chr5:39012863-39016574 3711 312 5 89 1 0 6 0 RICTOR
SE_02_049700015 chr5:52836915-52866360 29445 15 9 751 49 1 119 142 ITGA1,PELO
SE_02_049700104 chr5:53015787-53032935 17148 104 5 416 48 0 32 36 ITGA2
SE_02_049700129 chr5:53243664-53262004 18340 129 6 539 34 2 53 0 LOC257396
SE_02_049700145 chr5:53343980-53367840 23860 145 7 667 41 5 164 0 FST
SE_02_049700021 chr5:53402713-53430650 27937 21 11 764 49 3 93 0 FST
SE_02_049700083 chr5:54738297-54762601 24304 83 6 766 29 6 25 0 LOC102467080
SE_02_049700110 chr5:57815798-57841720 25922 110 5 691 12 2 55 0 LOC101928539
SE_02_049700275 chr5:61300808-61314872 14064 275 6 330 32 1 126 0 ZSWIM6
SE_02_049700014 chr5:65186483-65206397 19914 14 13 475 14 2 93 109 ADAMTS6
SE_02_049700276 chr5:73636421-73642501 6080 276 5 135 9 0 22 0 ARHGEF28
SE_02_049700319 chr5:76687576-76699640 12064 319 4 297 30 0 0 108 IQGAP2,NCRUPAR,F2R
SE_02_049700338 chr5:80963435-80975595 12160 338 5 315 21 1 18 0 RASGRF2,RASGRF2-AS1
SE_02_049700277 chr5:96219923-96228012 8089 277 5 216 9 0 8 0 LOC101929710,MIR583
SE_02_049700040 chr5:96242749-96260388 17639 40 9 395 24 0 30 0 LOC101929710,MIR583
SE_02_049700105 chr5:96288714-96299673 10959 105 7 273 9 2 6 0 LOC101929710,PCSK1,MIR583
SE_02_049700175 chr5:98308788-98315123 6335 175 7 175 0 0 5 0 RGMB
SE_02_049700061 chr6:11193436-11208415 14979 61 11 384 50 1 73 178 NEDD9
SE_02_049700131 chr6:133610858-133633277 22419 131 6 608 20 0 17 0 TARID,LINC01312
SE_02_049700234 chr6:139569188-139582797 13609 234 6 391 13 2 70 0 LOC645434
SE_02_049700086 chr6:140052510-140073544 21034 86 8 475 10 0 145 74 LOC100507477,LOC103352541
SE_02_049700180 chr6:148514136-148531615 17479 180 3 514 9 4 128 379 SASH1
SE_02_049700051 chr6:150855521-150882921 27400 51 10 772 31 2 36 789 MTHFD1L
SE_02_049700310 chr6:27166927-27177848 10921 310 3 247 24 2 0 47 HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK,HIST1H2BJ,HIST1H2AG
SE_02_049700182 chr6:37126205-37145738 19533 182 6 525 35 1 92 0 PIM1
SE_02_049700290 chr6:3789794-3804446 14652 290 6 363 18 0 33 0 PXDC1,FAM50B
SE_02_049700085 chr6:52532214-52556451 24237 85 5 611 96 4 67 53 TRAM2,TRAM2-AS1
SE_02_049700143 chr6:74248140-74256457 8317 143 7 323 32 0 26 0 LOC101928516
SE_02_049700334 chr6:75272564-75281492 8928 334 5 237 10 0 9 0 TMEM30A,COX7A2,LOC100506804
SE_02_049700301 chr6:80424622-80439256 14634 301 5 414 22 1 19 0 BCKDHB
SE_02_049700289 chr7:102864242-102876779 12537 289 5 318 45 0 13 0 FBXL13,LRRC17
SE_02_049700293 chr7:106767394-106776315 8921 293 4 241 41 3 0 18 PIK3CG
SE_02_049700309 chr7:120991991-121001934 9943 309 3 281 18 2 15 0 CPED1,ING3
SE_02_049700139 chr7:121076782-121088173 11391 139 5 297 20 12 15 5 CPED1
SE_02_049700190 chr7:130356814-130373359 16545 190 5 479 50 3 80 869 CPA5,CPA1
SE_02_049700227 chr7:130943008-130961093 18085 227 5 450 34 0 36 159 LINC-PINT,LOC100506860
SE_02_049700148 chr7:136952355-136963732 11377 148 8 296 8 1 21 0 CHRM2,LOC349160,MIR490
SE_02_049700133 chr7:137576975-137592991 16016 133 7 422 9 1 54 239 DGKI,PTN
SE_02_049700075 chr7:137974904-137998319 23415 75 9 678 11 1 58 0 CREB3L2,LOC100130880
SE_02_049700117 chr7:28152688-28167509 14821 117 7 367 22 5 33 0 JAZF1,JAZF1-AS1
SE_02_049700316 chr7:46138355-46146490 8135 316 4 230 3 0 0 0 IGFBP3
SE_02_049700278 chr7:47600372-47610488 10116 278 7 297 16 0 22 0 TNS3,LINC01447,C7ORF65,C7orf65
SE_02_049700196 chr7:47784245-47798268 14023 196 6 393 7 1 31 144 C7ORF69,PKD1L1,LINC00525
SE_02_049700237 chr7:5419613-5427709 8096 237 4 235 2 0 230 846 TNRC18
SE_02_049700273 chr7:5689522-5697332 7810 273 6 272 10 0 35 254 RNF216,RNF216-IT1,MIR6874
SE_02_049700038 chr7:79978754-79988359 9605 38 10 218 9 0 12 0 GNAI1
SE_02_049700088 chr7:94391610-94404663 13053 88 7 323 11 3 160 373 COL1A2
SE_02_049700125 chr8:105498342-105516781 18439 125 10 487 1 3 168 0 ZFPM2
SE_02_049700108 chr8:105645616-105661102 15486 108 8 435 0 0 52 0 ZFPM2
SE_02_049700066 chr8:118002172-118019472 17300 66 8 468 18 0 83 0 EXT1
SE_02_049700168 chr8:127897707-127918225 20518 168 5 599 3 1 26 0 PVT1,MIR1205,TMEM75
SE_02_049700113 chr8:130259416-130270363 10947 113 11 267 22 1 27 0 ASAP1,ASAP1-IT1
SE_02_049700036 chr8:13353434-13373127 19693 36 11 863 79 0 59 0 DLC1
SE_02_049700279 chr8:133574409-133583229 8820 279 7 288 12 7 6 0 ST3GAL1
SE_02_049700205 chr8:17081256-17091571 10315 205 3 318 18 4 33 70 MICU3
SE_02_049700216 chr8:23351834-23371199 19365 216 6 659 93 2 30 700 LOXL2,LOC100507156
SE_02_049700209 chr8:37142259-37157730 15471 209 5 441 2 1 125 0 LINC01605
SE_02_049700044 chr8:38825020-38855899 30879 44 7 716 58 2 52 1117 TACC1,PLEKHA2
SE_02_049700030 chr8:40514073-40536989 22916 30 9 715 75 2 70 200 ZMAT4,C8ORF4
SE_02_049700213 chr8:48891114-48904136 13022 213 7 373 11 1 0 0 SNAI2
SE_02_049700302 chr8:66113386-66123502 10116 302 4 285 30 0 11 146 TRIM55
SE_02_049700154 chr9:110123340-110142894 19554 154 7 512 22 3 112 504 AKAP2,PALM2-AKAP2
SE_02_049700024 chr9:112029764-112047605 17841 24 16 426 38 2 29 230 SUSD1,MIR4668
SE_02_049700250 chr9:112060801-112075493 14692 250 6 428 23 4 37 64 SUSD1
SE_02_049700211 chr9:115133123-115157114 23991 211 4 674 70 3 39 52 LOC101928748,DEC1,TNC
SE_02_049700041 chr9:115937797-115953724 15927 41 11 420 1 1 40 0 LINC00474
SE_02_049700252 chr9:16503670-16517335 13665 252 3 480 2 1 93 0 BNC2,C9ORF92
SE_02_049700177 chr9:35511649-35519732 8083 177 6 164 15 1 0 0 RUSC2,FAM166B
SE_02_049700035 chr9:36008568-36040190 31622 35 8 848 96 21 115 153 RECK,OR2S2,HRCT1
SE_02_049700080 chr9:36088681-36103241 14560 80 9 355 22 1 24 124 RECK,GLIPR2,OR2S2,CCIN,HRCT1
SE_02_049700165 chr9:91118587-91132907 14320 165 4 349 42 0 15 0 LOC100129316
SE_02_049700070 chr9:99019031-99040930 21899 70 7 642 24 1 48 807 COL15A1,TGFBR1
SE_02_049700004 chrUn_KI270752v1:20494-20795 301 4 1 0 0 0 0 0
SE_02_049700001 chrUn_KI270752v1:31-7492 7461 1 6 0 0 0 0 0

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2830427
Input ID: Name:GSM2830399
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb