SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_155500362
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-4_KIT e9
Genomic region: chr10:17171247-17215465
Size: 44218
Super-enhancer rank 362
Number of SE elements: 8
ChIP density(Case|Control): 10921.846|5664.3258
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRDMT1;
ROSE Overlap VIM-AS1; TRDMT1;
ROSE Proximal VIM; CUBN;
ROSE Closest TRDMT1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_155500362 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers