SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_045300325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Neuroblastoma
Biosample name: SJNB3
Genomic region: chr10:17196674-17219480
Size: 22806
Super-enhancer rank 325
Number of SE elements: 1
ChIP density(Case|Control): 94674.5478|4007.0142
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRDMT1;
ROSE Overlap VIM-AS1; TRDMT1;
ROSE Proximal VIM;
ROSE Closest TRDMT1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_045300325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers