SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000076604
Gene: TRAF4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:28744005-28750956 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_000500257 chr17:28726813-28746878 Sample_00_0005 Blood B-cell 257 3 440 31 2 190 1644 TLCD1,TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,SNORD42B
SE_02_105100073 chr17:28727071-28761736 Sample_02_1051 Esophagus Eso26 73 6 810 63 12 415 3065 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_072800223 chr17:28727194-28750048 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 223 5 499 34 3 254 2163 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_073300163 chr17:28729079-28750085 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 163 10 465 26 3 228 2060 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_073100223 chr17:28729118-28750071 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 223 6 464 26 3 227 2059 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_072900214 chr17:28729137-28747348 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 214 7 407 22 2 158 1547 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_073200184 chr17:28729138-28750040 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 184 9 462 26 3 226 2054 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_146500156 chr17:28729450-28764935 Sample_02_1465 Ovary CAOV4cis 156 10 846 58 12 387 2954 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_146400341 chr17:28730326-28751342 Sample_02_1464 Ovary CAOV4 341 5 491 30 4 230 2212 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_082601182 chr17:28730709-28752041 Sample_02_0826 Stomach gastric tumor 1182 7 512 32 4 230 2212 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_103500955 chr17:28730711-28762574 Sample_02_1035 Mammary gland HCC70_Vehicle 955 18 776 53 12 387 2954 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_077501047 chr17:28730772-28772821 Sample_02_0775 Pancreas EndoC-BH1_SE 1047 10 1042 71 14 387 2996 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_093000995 chr17:28730946-28754646 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 995 12 575 42 7 230 2212 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_104300972 chr17:28731898-28755767 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 972 19 581 39 8 230 2212 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_065200353 chr17:28733093-28761258 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 353 6 693 44 10 384 2954 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_073000328 chr17:28733811-28746702 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 328 4 310 12 2 156 1463 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_136200629 chr17:28734904-28750146 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 629 5 344 14 3 212 1920 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_104602210 chr17:28734930-28767792 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2210 12 805 52 13 370 2839 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_121800375 chr17:28735007-28750664 Sample_02_1218 Bone marrow Daudi 375 7 366 16 4 212 1981 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_077800290 chr17:28735060-28750055 Sample_02_0778 Mammary gland MCF7_FASR 290 3 341 14 3 209 1876 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_047900852 chr17:28735188-28749896 Sample_02_0479 Head and neck SCC25 852 7 336 14 3 203 1806 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_021600863 chr17:28735369-28749042 Sample_02_0216 Skin NHEK_scramble 863 4 315 14 3 168 1597 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_01_006700339 chr17:28736699-28751445 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 339 1 356 19 4 209 1920 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_073400196 chr17:28736856-28747965 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 196 1 270 11 2 143 1347 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_021300758 chr17:28736875-28747471 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 758 1 256 9 2 139 1281 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_008600444 chr17:28736944-28750785 Sample_02_0086 Pancreas CAPAN1 444 1 337 17 4 208 1874 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_011800136 chr17:28736980-28750895 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 136 1 338 17 4 209 1888 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_01_002000193 chr17:28737006-28747421 Sample_01_0020 Blood B-cell 193 1 251 9 2 137 1267 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_078100467 chr17:28737013-28743948 Sample_02_0781 Lymphoma Pfeiffer_DMSO 467 1 184 5 1 69 1024 NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,TRAF4,RPL23A
SE_02_032100563 chr17:28737052-28751484 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 563 1 355 20 4 209 1920 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_01_005400324 chr17:28737056-28751357 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 324 1 351 19 4 209 1920 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_073500169 chr17:28737058-28748133 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 169 1 266 11 2 149 1376 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_078300497 chr17:28737135-28746449 Sample_02_0783 Blood MEC2 497 1 229 9 2 134 1172 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_012000180 chr17:28737141-28748164 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 180 1 266 11 2 150 1379 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_077900192 chr17:28737154-28750855 Sample_02_0779 Lymphoma U2932 192 1 335 17 4 209 1879 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_078200975 chr17:28737191-28746050 Sample_02_0782 Blood MEC1 975 1 217 9 2 127 1167 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_075100154 chr17:28737197-28747763 Sample_02_0751 Lymphoma Rec-1_WO 154 1 258 11 2 141 1290 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_075000390 chr17:28737228-28743933 Sample_02_0750 Lymphoma Rec-1_GSI 390 1 182 5 1 69 1008 NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,TRAF4,RPL23A
SE_02_087400405 chr17:28737408-28747934 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 405 4 260 11 2 139 1297 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_002500382 chr17:28737559-28750237 Sample_02_0025 Blood CD19donorA 382 5 303 13 3 197 1717 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_000200374 chr17:28737666-28751264 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 374 1 337 18 4 198 1811 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_00_005600793 chr17:28737730-28761598 Sample_00_0056 Sigmoid colon sigmoid colon 3y 793 11 600 40 11 355 2536 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_087100225 chr17:28737826-28746425 Sample_02_0871 Colon HCT116_GLIS2.2-DMSO 225 2 215 9 2 122 1025 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_107100321 chr17:28737953-28746482 Sample_02_1071 Blood Jurkat_WT 321 2 209 9 2 113 994 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_122500344 chr17:28738214-28747501 Sample_02_1225 Bone marrow RAJI 344 1 220 8 1 110 1029 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_070900374 chr17:28738294-28761310 Sample_02_0709 Pancreas hT85_organoid 374 6 572 37 9 336 2396 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_067200308 chr17:28738304-28762597 Sample_02_0672 Endometrium endometrium cancer_DSG 308 10 604 40 11 337 2395 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_105200161 chr17:28738393-28749794 Sample_02_1052 Esophagus JH-EsoAd1 161 5 265 11 2 166 1441 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_067400215 chr17:28738394-28763651 Sample_02_0674 Endometrium E1_FA 215 11 623 40 11 337 2393 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_005300211 chr17:28738447-28750059 Sample_00_0053 Embryo trophoblast cell originated from H1 211 4 269 11 2 177 1487 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_104801648 chr17:28738682-28749794 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1648 6 257 11 2 166 1398 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_108800192 chr17:28739043-28751249 Sample_02_1088 Mammary gland T47D_shCtrl_45min 192 6 292 15 3 171 1532 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_092900505 chr17:28739503-28750763 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 505 7 266 14 3 165 1424 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_081000065 chr17:28739512-28750086 Sample_02_0810 Mammary gland T47D noSerum 65 6 237 10 2 164 1321 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_078000360 chr17:28739542-28750122 Sample_02_0780 Liver SMMC-7721 360 1 235 10 2 164 1328 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_116800379 chr17:28739705-28763650 Sample_02_1168 Biliary H69_TGF Vehicle_2 379 11 582 39 11 323 2215 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085300167 chr17:28739934-28750255 Sample_02_0853 Mammary gland MCF7L-TamR 167 1 226 10 2 165 1359 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085200283 chr17:28739974-28750148 Sample_02_0852 Mammary gland MCF7L-P 283 1 222 10 2 165 1334 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_115900283 chr17:28739974-28750148 Sample_02_1159 Mammary gland MCF7 283 1 222 10 2 165 1334 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_109000178 chr17:28740004-28751301 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 178 4 263 15 3 166 1473 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_004600133 chr17:28740225-28752109 Sample_01_0046 Mammary gland MCF-7 133 1 280 17 3 166 1473 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_116000073 chr17:28740266-28773881 Sample_02_1160 Embryo H1_shLuc 73 7 822 59 13 323 2257 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A,SEZ6
SE_02_003200427 chr17:28740303-28750782 Sample_02_0032 Pancreas pancreatic-islets-M 427 1 235 13 3 165 1425 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_125800214 chr17:28740323-28750139 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 214 1 206 9 2 165 1324 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085700402 chr17:28740350-28751880 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 402 1 267 17 3 166 1462 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_155300923 chr17:28740367-28761882 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 923 6 516 38 11 323 2204 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_035300532 chr17:28740408-28750185 Sample_02_0353 Colon HT29 532 1 207 9 2 165 1318 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_076400147 chr17:28740523-28750179 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 147 1 206 9 2 158 1286 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_117300385 chr17:28740580-28765911 Sample_02_1173 Brain GBM01 385 9 612 43 12 315 2157 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_096200177 chr17:28740582-28751270 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 177 1 245 14 3 158 1413 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_080900113 chr17:28740684-28751089 Sample_02_0809 Mammary gland T47D Serum 113 1 244 14 3 158 1387 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_116700529 chr17:28740691-28750128 Sample_02_1167 Biliary H69_TGF Vehicle_1 529 1 203 9 2 157 1252 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_023700391 chr17:28740692-28751104 Sample_02_0237 Colon V389 391 1 244 14 3 158 1384 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_037000707 chr17:28740765-28749395 Sample_02_0370 Skeletal muscle RH4 707 1 182 9 2 129 1072 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_107700222 chr17:28740774-28748947 Sample_02_1077 Mammary gland MCF7_TET2KO-E2 222 1 173 9 2 113 998 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_081900194 chr17:28740785-28751322 Sample_02_0819 Ovary Mucinous ovarian cancer 194 1 243 15 3 158 1372 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_030900214 chr17:28740800-28748089 Sample_02_0309 Neuroblastoma SJNB6 214 1 158 7 1 95 820 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_085400211 chr17:28740909-28750148 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 211 1 197 9 2 156 1203 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_107600264 chr17:28741003-28748739 Sample_02_1076 Mammary gland MCF7_TET2WT-E2 264 1 165 9 2 111 899 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_097000329 chr17:28741077-28751428 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 329 1 237 15 3 156 1306 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_022800443 chr17:28741171-28751230 Sample_02_0228 Oesophagus KYSE510 443 1 230 14 3 152 1288 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_097100785 chr17:28741238-28749991 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 785 1 187 9 2 142 1097 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_108700122 chr17:28741241-28750159 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 122 1 188 9 2 150 1134 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_096300221 chr17:28741267-28751472 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 221 1 235 15 3 151 1264 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_061500753 chr17:28741268-28747429 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 753 1 131 5 1 80 614 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_038000341 chr17:28741285-28750309 Sample_02_0380 Skeletal muscle RH18 341 1 192 9 2 150 1156 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_118400203 chr17:28741304-28765139 Sample_02_1184 Brain GBM13 203 8 576 41 11 308 1999 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_098900887 chr17:28741319-28752108 Sample_02_0989 Kidney kidney cortex_WT 887 1 256 17 3 151 1252 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_029400725 chr17:28741328-28752229 Sample_02_0294 Pancreatic L3-6_DMSO 725 1 257 17 3 151 1247 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_142700997 chr17:28741353-28746283 Sample_02_1427 Shoulder fibroblast_343 997 1 106 5 1 73 494 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_006100350 chr17:28741400-28750392 Sample_01_0061 Prostate RWPE1 350 1 193 11 3 150 1141 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_097700395 chr17:28741450-28765948 Sample_02_0977 Brain 2089_H3.3K27WT 395 9 593 43 12 308 1956 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_062400371 chr17:28741451-28748953 Sample_02_0624 Mammary gland TAMR_VEH 371 1 157 9 2 106 838 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_129800325 chr17:28741454-28763680 Sample_02_1298 Hilar lymph node Hilar lymph node 325 13 535 38 11 308 1956 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_002100437 chr17:28741455-28748079 Sample_01_0021 Skin bipolar-neuron 437 1 143 7 1 86 663 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_037800331 chr17:28741472-28748921 Sample_02_0378 Skeletal muscle SCMC 331 1 155 9 2 105 824 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_035800448 chr17:28741509-28749817 Sample_02_0358 Colon LS180 448 1 175 9 2 136 998 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_108900143 chr17:28741520-28750083 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 143 1 181 9 2 147 1051 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_008501065 chr17:28741534-28750786 Sample_01_0085 Stomach stomach 1065 1 207 13 3 147 1156 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_101701451 chr17:28741535-28748661 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1451 1 148 9 2 103 763 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_143400557 chr17:28741537-28751069 Sample_02_1434 Trophoblast trophoblast stem cells 557 1 216 14 3 147 1189 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_065900443 chr17:28741555-28750155 Sample_02_0659 Lung H23 443 1 177 9 2 146 1060 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_136700232 chr17:28741559-28749088 Sample_02_1367 Pancreas Capan1-untreated 232 1 154 9 2 106 845 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_119700493 chr17:28741569-28765663 Sample_02_1197 Brain GBM33 493 7 579 42 12 304 1938 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_108600105 chr17:28741586-28750153 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 105 1 177 9 2 146 1058 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_140700179 chr17:28741589-28762464 Sample_02_1407 Prostate LNCaP_R1881 4h 179 5 504 38 11 304 1936 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_007200694 chr17:28741590-28751068 Sample_01_0072 Breast epithelium breast-epithelium 694 1 215 14 3 147 1181 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_033000268 chr17:28741601-28751065 Sample_02_0330 Endoderm MHG 268 1 215 14 3 147 1179 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_040300319 chr17:28741613-28751599 Sample_02_0403 Mammary gland T-47D_untreat 319 1 232 17 3 147 1190 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_113000410 chr17:28741620-28747255 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 410 1 120 5 1 75 502 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_119300396 chr17:28741622-28751191 Sample_02_1193 Brain GBM27 396 1 217 14 3 147 1186 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_117900116 chr17:28741627-28765781 Sample_02_1179 Brain GBM08 116 8 582 43 12 304 1928 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_074000298 chr17:28741644-28761635 Sample_02_0740 Muscle RH3 298 4 484 38 11 304 1922 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_137100366 chr17:28741660-28749997 Sample_02_1371 Pancreas Patu899S-untreated 366 2 175 9 2 138 1005 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_004000591 chr17:28741663-28750901 Sample_02_0040 Embryo PFG 591 1 206 13 3 147 1147 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_123400305 chr17:28741666-28750185 Sample_02_1234 Mammary gland T47D_Full 305 1 178 9 2 146 1046 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_127800851 chr17:28741667-28751160 Sample_02_1278 Chordoma UCH1_DMSO_48h 851 1 217 14 3 147 1178 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_109200233 chr17:28741671-28750117 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 233 1 176 9 2 145 1032 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_062300404 chr17:28741687-28749275 Sample_02_0623 Mammary gland TAMR_E2 404 1 155 9 2 111 847 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_153900897 chr17:28741693-28748160 Sample_02_1539 Nasopharyngeal C666-1 897 1 136 7 1 88 634 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_005500683 chr17:28741702-28746244 Sample_02_0055 Lung IMR-90_Nutlin-3a 683 1 92 5 1 69 427 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_109900895 chr17:28741720-28746289 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 895 1 93 5 1 69 422 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_025700358 chr17:28741723-28751005 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 358 1 210 13 3 147 1149 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_076301137 chr17:28741731-28748634 Sample_02_0763 Podocyte podocyte_DEX 1137 1 144 9 2 102 720 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_035500275 chr17:28741735-28749017 Sample_02_0355 Colon HCT15 275 1 149 9 2 106 798 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_080200100 chr17:28741737-28765128 Sample_02_0802 Brain 3094 100 7 563 41 11 304 1904 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_119600449 chr17:28741737-28767943 Sample_02_1196 Brain GBM32 449 12 641 47 12 304 1946 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_077700184 chr17:28741744-28748585 Sample_02_0777 Mammary gland MCF7_TAMR 184 1 143 9 2 100 709 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085500304 chr17:28741750-28751128 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 304 1 215 14 3 147 1153 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_015800659 chr17:28741766-28747997 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 659 2 134 7 1 81 591 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_087300441 chr17:28741766-28748144 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 441 3 134 7 1 88 617 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_119400518 chr17:28741773-28766004 Sample_02_1194 Brain GBM28 518 10 586 43 12 304 1898 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_143201132 chr17:28741788-28747520 Sample_02_1432 Bone A673 STAG2 WT 1132 1 122 6 1 77 512 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_136500435 chr17:28741788-28747720 Sample_02_1365 Pancreas AsPC1-untreated 435 1 127 7 1 79 522 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_109300266 chr17:28741806-28749272 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 266 1 153 9 2 111 825 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_009500608 chr17:28741808-28750805 Sample_02_0095 Mammary gland MDA-MB-468 608 1 204 13 3 146 1106 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_00_004300394 chr17:28741821-28751172 Sample_00_0043 Stomach stomach_96d 394 1 215 14 3 147 1150 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_004200418 chr17:28741823-28751299 Sample_02_0042 Embryo endodermal CyT49_ES_D0 418 1 217 14 3 147 1150 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_118300607 chr17:28741826-28763666 Sample_02_1183 Brain GBM12 607 9 526 38 11 304 1890 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_140600205 chr17:28741839-28751021 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 205 1 212 14 3 147 1128 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_049200897 chr17:28741840-28748063 Sample_02_0492 Pharyng Detroit 562_LPS 897 1 134 7 1 82 590 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_118700439 chr17:28741841-28764348 Sample_02_1187 Brain GBM16 439 9 545 40 11 304 1887 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_055800126 chr17:28741852-28747460 Sample_02_0558 iPSCs FX52 iPSCs mock 126 3 119 5 1 76 503 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_003600491 chr17:28741864-28751195 Sample_02_0036 Embryo H7 491 1 215 14 3 147 1139 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_118900175 chr17:28741875-28761482 Sample_02_1189 Brain GBM22 175 4 477 36 10 304 1875 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_074800877 chr17:28741877-28748593 Sample_02_0748 Mammary gland HCC1599_WO 877 1 143 9 2 101 680 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_001700134 chr17:28741881-28751067 Sample_02_0017 Embryo H9_ESC 134 1 212 14 3 147 1118 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_049100920 chr17:28741887-28747926 Sample_02_0491 Pharyng Detroit 562-Control 920 1 132 7 1 79 552 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_066400420 chr17:28741893-28750571 Sample_02_0664 Prostate LNCaP_DMSO 420 1 194 11 3 146 1051 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_040400437 chr17:28741895-28751310 Sample_02_0404 Mammary gland ZR-75-1_2 437 1 218 15 3 147 1129 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_140800261 chr17:28741897-28764467 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 261 5 551 40 11 304 1871 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_079400120 chr17:28741906-28762217 Sample_02_0794 Brain 1552 120 3 495 38 11 304 1871 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_143500765 chr17:28741907-28748189 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 765 1 135 7 1 91 600 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_003900141 chr17:28741912-28751179 Sample_02_0039 Embryo AFG 141 1 215 14 3 147 1129 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_016600397 chr17:28741913-28748697 Sample_02_0166 Mammary gland HCC1954_Parental 397 1 144 9 2 102 694 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_016700359 chr17:28741913-28748697 Sample_02_0167 Mammary gland HCC1954_LCC2 359 1 144 9 2 102 694 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_125900530 chr17:28741920-28745931 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 530 1 86 5 1 62 379 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_016800447 chr17:28741920-28750637 Sample_02_0168 Prostate LNCaP 447 1 197 11 3 146 1062 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_109100164 chr17:28741937-28750770 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 164 3 201 13 3 146 1077 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_079500269 chr17:28741942-28761588 Sample_02_0795 Brain 1953 269 5 478 36 10 304 1865 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_102500649 chr17:28741949-28747971 Sample_02_1025 Esophagus KYSE150 649 1 132 7 1 81 553 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_066300560 chr17:28741949-28774517 Sample_02_0663 Thyroid TT 560 6 798 60 14 304 1907 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_101500425 chr17:28741963-28774647 Sample_02_1015 Embryo H9_ Undifferentiated 425 5 797 60 14 303 1903 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_072700667 chr17:28741965-28747841 Sample_02_0727 Fetal lung IMR90_Etoposide 667 2 126 7 1 78 514 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_154000640 chr17:28741991-28748226 Sample_02_1540 Nasopharyngeal HK1 640 1 129 7 1 90 589 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_006800661 chr17:28741991-28761872 Sample_02_0068 Skin A375_DMSO 661 3 479 38 11 303 1851 C17ORF63,TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_157200993 chr17:28741997-28748909 Sample_02_1572 iPSCs FiPSC 993 1 141 9 2 101 714 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_126900377 chr17:28742002-28746142 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 377 1 83 5 1 64 360 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_074900722 chr17:28742003-28762275 Sample_02_0749 Mammary gland HCC1599_GSI 722 3 492 38 11 303 1848 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_008000427 chr17:28742022-28751317 Sample_01_0080 Prostate prostate 427 1 211 15 3 146 1103 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_101600388 chr17:28742032-28762850 Sample_02_1016 Embryo H9_Mesendoderm_24h 388 5 505 38 11 303 1843 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_056700189 chr17:28742051-28749245 Sample_02_0567 Mammary gland MCF7L-P_TAMR 189 2 145 9 2 108 773 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_011400444 chr17:28742055-28749541 Sample_01_0114 Colon HCT116_encode 444 1 153 9 2 127 823 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085600261 chr17:28742057-28748664 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 261 1 136 9 2 100 660 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_136100678 chr17:28742066-28748063 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 678 1 126 7 1 80 542 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_102700286 chr17:28742082-28747987 Sample_02_1027 Esophagus KYSE180_1 286 1 126 7 1 79 523 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_142100142 chr17:28742083-28747314 Sample_02_1421 Brain NHA 142 2 110 5 1 73 418 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_051100228 chr17:28742099-28748065 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 228 1 124 7 1 80 535 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_088601337 chr17:28742148-28750097 Sample_02_0886 Skin foreskin_ p63KLF4 1337 3 162 9 2 143 931 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_111100936 chr17:28742156-28748043 Sample_02_1111 Other HGrC1_SMAD2/3KO 936 1 122 7 1 80 525 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_003700503 chr17:28742167-28747713 Sample_01_0037 Liver hepatocyte 503 1 114 7 1 77 447 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_147000040 chr17:28742179-28750104 Sample_02_1470 Umbilical Vein H441 40 1 162 9 2 143 926 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_060300681 chr17:28742180-28746797 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 681 1 96 5 1 71 332 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_047800377 chr17:28742182-28748486 Sample_02_0478 Colon normal colon mucosa 377 1 129 9 2 96 602 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_136400499 chr17:28742185-28746103 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 499 1 76 5 1 63 332 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_117200121 chr17:28742200-28763818 Sample_02_1172 Embryo H9 WT 121 2 517 39 11 302 1814 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_124800233 chr17:28742204-28749244 Sample_02_1248 Bladder RT4 233 1 141 9 2 108 743 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_051000212 chr17:28742206-28748081 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 212 1 122 7 1 80 516 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_126800603 chr17:28742207-28746277 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 603 1 80 5 1 67 321 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_029300303 chr17:28742211-28749467 Sample_02_0293 Pancreatic L3-6_4SC-202 303 1 148 9 2 124 781 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_076500239 chr17:28742216-28753326 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 239 1 260 21 6 145 1066 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_002001091 chr17:28742234-28747967 Sample_00_0020 Large intestine large-intestine_108d 1091 1 121 7 1 79 489 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_114800359 chr17:28742246-28746433 Sample_02_1148 Kidney WT 9-12_control_vehicle 359 1 86 5 1 70 313 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_002400432 chr17:28742251-28748327 Sample_00_0024 Embryo mesendoderm 432 1 124 7 1 91 553 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_002101022 chr17:28742258-28748025 Sample_02_0021 Colon V429 1022 1 120 7 1 79 493 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_131900367 chr17:28742264-28746027 Sample_02_1319 Connective Tissue HT1080_DDIT3 367 1 72 5 1 63 308 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_093100535 chr17:28742273-28747854 Sample_02_0931 Embryo H9 UTXKO 535 3 116 7 1 77 455 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_076000803 chr17:28742285-28763627 Sample_02_0760 Ovary BIN-67_SMARCA4 803 7 512 38 11 302 1793 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_147200691 chr17:28742286-28746078 Sample_02_1472 Fetal lung IMR-90 691 1 73 5 1 63 305 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_007900505 chr17:28742309-28750990 Sample_01_0079 Peyers patch Peyers-patch 505 1 194 13 3 145 1023 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_094800881 chr17:28742318-28748001 Sample_02_0948 Pharyng Detroit562 881 1 118 7 1 79 478 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_085800484 chr17:28742347-28747042 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 484 1 96 5 1 73 295 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_117700354 chr17:28742354-28765979 Sample_02_1177 Brain GBM05 354 7 567 43 12 302 1776 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_001500468 chr17:28742385-28749393 Sample_02_0015 Liver HepG2_shNS 468 1 136 8 2 116 725 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_01_003300255 chr17:28742389-28750938 Sample_01_0033 Embryo H9 255 2 185 12 3 145 1004 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_003801041 chr17:28742399-28750993 Sample_02_0038 Embryo DE 1041 1 187 12 3 145 1006 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_125400361 chr17:28742402-28747664 Sample_02_1254 Bladder Bladder tumor Basal1 361 1 104 6 1 77 389 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_140900319 chr17:28742403-28749461 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 319 1 139 8 2 123 739 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_004200228 chr17:28742407-28750614 Sample_00_0042 Stomach stomach_30y 228 1 174 10 3 144 963 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_137000318 chr17:28742409-28750014 Sample_02_1370 Pancreas Patu8902-untreated 318 3 151 8 2 137 860 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_024100552 chr17:28742412-28747680 Sample_02_0241 Colon V456 552 1 103 6 1 77 390 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_024000658 chr17:28742414-28747853 Sample_02_0240 Colon V429_2 658 1 108 6 1 77 428 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_117800244 chr17:28742418-28751263 Sample_02_1178 Brain GBM07 244 1 193 13 3 145 1026 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_105400350 chr17:28742434-28750005 Sample_02_1054 Esophagus SKGT4 350 2 150 8 2 136 854 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_009900498 chr17:28742434-28750062 Sample_01_0099 Colon transverse colon 498 2 150 8 2 142 867 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_004800356 chr17:28742435-28747911 Sample_02_0048 Embryo endodermal CyT49_HE 356 1 109 6 1 77 439 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_080000225 chr17:28742435-28763905 Sample_02_0800 Brain 3679 225 4 508 38 11 302 1765 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_132100783 chr17:28742451-28747173 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 783 1 93 4 1 73 315 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_102600504 chr17:28742454-28747999 Sample_02_1026 Esophagus KYSE200 504 1 111 6 1 79 455 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_094600314 chr17:28742463-28747604 Sample_02_0946 Tongue HN12 314 1 100 6 1 76 382 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_047700461 chr17:28742463-28748657 Sample_02_0477 Colon intestinal epithelial organoids_139a 461 1 119 8 2 100 580 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_081700744 chr17:28742466-28748630 Sample_02_0817 Ovary Epithelial ovarian cancer 744 1 118 8 2 100 576 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_012500502 chr17:28742469-28762515 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 502 2 476 37 11 302 1761 C17ORF63,TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_084000978 chr17:28742472-28761733 Sample_02_0840 Embryo hNPCs_R1159Q/+ 978 3 456 37 11 302 1760 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_023600651 chr17:28742476-28747414 Sample_02_0236 Colon V206 651 1 91 4 1 73 362 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_095800617 chr17:28742480-28751619 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 617 1 203 16 3 145 1014 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_075700486 chr17:28742490-28748610 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 486 1 116 8 2 100 565 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_120200236 chr17:28742490-28751176 Sample_02_1202 Brain GBM38 236 1 188 13 3 145 1013 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_004900263 chr17:28742498-28750113 Sample_00_0049 Small intestine small intestine 30y 263 4 147 8 2 143 865 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_00_003600797 chr17:28742503-28747787 Sample_00_0036 Small intestine small-intestine_108days 797 1 102 6 1 77 401 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_157000197 chr17:28742504-28774741 Sample_02_1570 iPSCs EiPSC 197 17 775 60 14 302 1797 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_004900502 chr17:28742506-28747860 Sample_02_0049 Embryo endodermal CyT49_GTtoH 502 1 105 6 1 77 418 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_004600102 chr17:28742514-28747938 Sample_02_0046 Embryo endodermal CyT49_ES_D10 102 1 104 6 1 77 434 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_113100447 chr17:28742517-28750654 Sample_02_1131 Pancreas T3M4 wt 447 5 169 10 3 144 947 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_138200553 chr17:28742531-28747492 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 553 1 93 5 1 75 367 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_071301389 chr17:28742532-28750123 Sample_02_0713 Pancreas BxPC3_sgTP63 1389 4 146 8 2 143 863 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_075600556 chr17:28742532-28761778 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 556 4 456 37 11 302 1748 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_132201190 chr17:28742535-28746415 Sample_02_1322 Connective Tissue HT1080_WT 1190 1 69 4 1 70 260 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_132001121 chr17:28742538-28746235 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1121 1 64 4 1 65 260 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_075300423 chr17:28742542-28751057 Sample_02_0753 Embryo ES-derived progenitors_FG type 423 4 184 13 3 145 991 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_01_009500616 chr17:28742551-28750793 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 616 3 175 12 3 144 959 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_097600431 chr17:28742555-28761845 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 431 6 456 37 11 302 1745 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_04_000600507 chr17:28742560-28747399 Sample_04_0006 Lung A549 GFP control 507 2 89 4 1 73 346 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_049300388 chr17:28742561-28750152 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 388 3 145 8 2 144 864 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_095600506 chr17:28742561-28765912 Sample_02_0956 Brain IDH1_2658 506 9 554 42 12 302 1745 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_095300525 chr17:28742565-28765684 Sample_02_0953 Brain H3.3K27M_1840 525 5 547 41 12 302 1744 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_052400198 chr17:28742568-28750870 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 198 5 174 12 3 145 968 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_107900304 chr17:28742570-28750674 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 304 3 168 11 3 144 944 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_064500267 chr17:28742573-28750698 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 267 4 169 12 3 144 947 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_067300187 chr17:28742573-28764454 Sample_02_0673 Prostate LNCAP_FA 187 7 521 39 11 302 1744 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_143301665 chr17:28742580-28746426 Sample_02_1433 Bone A673 STAG2 null 1665 1 68 4 1 70 256 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_064400130 chr17:28742582-28750034 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 130 4 143 8 2 141 841 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_066600329 chr17:28742582-28750263 Sample_02_0666 Prostate RWPE1 Lacz rep1 329 2 148 8 2 144 889 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_154100776 chr17:28742590-28747083 Sample_02_1541 Nasopharyngeal HNE1 776 1 84 4 1 73 269 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_062900656 chr17:28742591-28749967 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 656 2 142 8 2 136 828 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_083901130 chr17:28742592-28761842 Sample_02_0839 Embryo hNPCs_K755R/+ 1130 4 455 37 11 302 1744 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_138100496 chr17:28742605-28774634 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 496 13 770 59 14 302 1784 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_132500542 chr17:28742634-28746005 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 542 1 54 4 1 63 241 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_027700332 chr17:28742647-28762222 Sample_02_0277 Retina FW18 332 2 463 37 11 302 1727 C17ORF63,TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_093500487 chr17:28742652-28751563 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 487 4 198 16 3 145 984 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_064800693 chr17:28742658-28750098 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 693 3 142 8 2 143 832 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_049400270 chr17:28742683-28750688 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 270 3 166 12 3 144 924 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_121200267 chr17:28742731-28751185 Sample_02_1212 Brain GBM30 267 1 181 13 3 145 966 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_027800393 chr17:28742737-28751187 Sample_02_0278 Retina FW24 393 1 181 13 3 145 965 TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_027500422 chr17:28742740-28762117 Sample_02_0275 Retina FW14 422 3 459 37 11 302 1706 C17ORF63,TRAF4,NEK8,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,TLCD1,SNORD42B
SE_02_052500186 chr17:28742760-28750728 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 186 2 166 12 3 144 909 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_125500213 chr17:28742777-28747482 Sample_02_1255 Bladder Bladder tumor Luminal2 213 1 86 5 1 75 319 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_051300081 chr17:28742781-28747757 Sample_02_0513 Prostate LNCaP95_shARfl_ETOH 81 3 93 6 1 77 335 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_01_010101170 chr17:28742789-28761908 Sample_01_0101 Pancreas pancreas_54y 1170 5 453 37 11 302 1698 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_118100417 chr17:28742823-28765611 Sample_02_1181 Brain GBM10 417 5 540 41 12 302 1691 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_00_004100646 chr17:28742839-28748693 Sample_00_0041 Stomach stomach_3y 646 1 109 8 2 100 509 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_005800214 chr17:28742912-28756543 Sample_00_0058 Stomach stomach 34y 214 4 323 28 7 150 1058 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_028600519 chr17:28742932-28750975 Sample_02_0286 Liver HuH7_IL-1alpha_1h 519 2 171 12 3 145 908 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_021101264 chr17:28742933-28763845 Sample_02_0211 Lung MRC-5_NFD_1DPT 1264 3 493 38 11 302 1673 C17ORF63,TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_001101024 chr17:28742966-28748437 Sample_00_0011 Esophagus esophagus 1024 1 103 8 2 96 443 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_006400889 chr17:28742971-28747710 Sample_02_0064 Embryo DN-Early_G1 889 2 90 6 1 77 297 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_001400363 chr17:28742973-28746303 Sample_02_0014 Liver HepG2_shBRG1 363 1 58 4 1 67 185 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_004400142 chr17:28742976-28748076 Sample_02_0044 Embryo endodermal CyT49_ES_D5 142 1 98 6 1 80 378 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_002600856 chr17:28742979-28747846 Sample_00_0026 Muscle of trunk muscle-of-trunk 856 1 94 6 1 77 327 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_002201009 chr17:28742985-28750124 Sample_00_0022 Lung lung_30y 1009 1 138 8 2 143 788 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_003500477 chr17:28742985-28750221 Sample_00_0035 Sigmoid colon sigmoid-colon 477 1 141 8 2 144 808 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_003800335 chr17:28742987-28751269 Sample_00_0038 Spinal cord spinal-cord_108d 335 1 180 13 3 145 931 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_001200714 chr17:28742993-28747846 Sample_00_0012 Embryo H1-hESC 714 1 94 6 1 77 327 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_001900307 chr17:28742995-28750061 Sample_02_0019 Embryo Neural crest cells 307 1 137 8 2 142 775 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_00_001600158 chr17:28742997-28751280 Sample_00_0016 Foreskin iPS-DF-19.11 163 1 181 13 3 145 931 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_004500158 chr17:28743002-28748172 Sample_02_0045 Embryo endodermal CyT49_ES_D7 158 1 98 6 1 89 396 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_027600354 chr17:28743017-28762503 Sample_02_0276 Retina FW15 354 2 464 37 11 302 1673 C17ORF63,TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_095500455 chr17:28743060-28749828 Sample_02_0955 Brain IDH1_2469 455 4 129 8 2 132 727 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_121300644 chr17:28743062-28766084 Sample_02_1213 Brain GBM31 644 7 547 43 12 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_074200033 chr17:28743064-28777589 Sample_02_0742 Embryo ESCs_day0 33 15 813 64 15 302 1715 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_093200604 chr17:28743069-28746426 Sample_02_0932 Embryo H9 WT_1 604 1 59 4 1 70 185 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_096900250 chr17:28743073-28765525 Sample_02_0969 Brain H3.3K27M_PL637 250 6 535 41 12 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_01_006800177 chr17:28743077-28762197 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 177 2 456 37 11 302 1673 C17ORF63,TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_039600449 chr17:28743087-28750133 Sample_02_0396 Skin NHEK-D 449 1 135 8 2 144 789 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_098200332 chr17:28743097-28763875 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 332 5 492 38 11 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_097400378 chr17:28743099-28747454 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 378 2 80 4 1 74 289 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_01_002200064 chr17:28743100-28748963 Sample_01_0022 Prostate C4-2B 64 1 110 8 2 101 558 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_117600240 chr17:28743110-28765166 Sample_02_1176 Brain GBM04 240 6 525 40 11 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_120500845 chr17:28743116-28765738 Sample_02_1205 Brain NB3 845 8 539 41 12 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_00_001000563 chr17:28743123-28747874 Sample_00_0010 Embryo endodermal-cell 563 1 93 6 1 77 340 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_050300441 chr17:28743139-28748054 Sample_02_0503 Esophagus KYSE140_1 441 1 95 6 1 80 376 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_051500446 chr17:28743139-28748055 Sample_02_0515 Esophagus KYSE140 446 1 95 6 1 80 376 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_119800708 chr17:28743141-28765136 Sample_02_1198 Brain GBM34 708 7 524 40 11 302 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_121100388 chr17:28743149-28765669 Sample_02_1211 Brain GBM21 388 10 537 41 12 301 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_065000566 chr17:28743153-28750072 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 566 4 135 8 2 141 778 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_093700881 chr17:28743154-28763949 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 881 5 493 38 11 301 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_135700593 chr17:28743171-28747545 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 593 1 84 5 1 73 292 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_050400574 chr17:28743176-28748732 Sample_02_0504 Esophagus KYSE510_1 574 1 105 8 2 98 507 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_064700421 chr17:28743179-28748249 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 421 1 96 6 1 87 414 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_135900881 chr17:28743182-28747674 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 881 1 86 6 1 75 293 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_065700276 chr17:28743184-28746995 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 276 2 75 4 1 71 185 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_064600267 chr17:28743185-28750080 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 267 3 135 8 2 140 778 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_064900436 chr17:28743196-28749733 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 436 2 128 8 2 127 698 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_074500472 chr17:28743196-28750771 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 472 5 163 12 3 142 884 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_133800370 chr17:28743204-28747546 Sample_02_1338 Esophagus KYSE180 370 1 83 5 1 73 292 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_113200619 chr17:28743221-28761969 Sample_02_1132 Pancreas KLM1 wt 619 5 449 37 11 300 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_136600545 chr17:28743233-28747461 Sample_02_1366 Pancreas BxPC3-untreated 545 2 79 4 1 72 291 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_130500203 chr17:28743244-28747138 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 203 1 76 4 1 71 215 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_094500360 chr17:28743258-28747547 Sample_02_0945 Brain SF767 360 2 83 5 1 73 292 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_112100627 chr17:28743266-28750042 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 627 6 133 8 2 139 774 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_065300404 chr17:28743282-28746783 Sample_02_0653 Tracheobronchial epithelial HTBE_H5N1_03h 404 2 67 4 1 69 185 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_048001055 chr17:28743282-28750596 Sample_02_0480 Gingival epithelial HGEP 1055 3 155 10 3 142 858 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_067500083 chr17:28743325-28768386 Sample_02_0675 Embryo H1 hESC-derived neural progenitor cells_Smad_0hr 83 13 606 46 12 300 1715 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_066500272 chr17:28743373-28746876 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 272 2 70 4 1 71 185 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_096000307 chr17:28743388-28750798 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 307 3 163 12 3 142 886 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_077400307 chr17:28743390-28750042 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 307 3 131 8 2 139 774 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_066100761 chr17:28743414-28762024 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 761 7 447 37 11 300 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_093400534 chr17:28743425-28746461 Sample_02_0934 Embryo H7-WT 534 1 56 4 1 68 185 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_129600400 chr17:28743426-28763661 Sample_02_1296 Perigastric lymph node Perigastric lymph node 400 15 484 37 11 300 1673 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_067700131 chr17:28743966-28762493 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 131 5 449 37 11 294 1626 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_016200108 chr17:28743974-28762283 Sample_02_0162 Prostate C4-2B_vehicle_24h 108 5 446 37 11 293 1625 C17ORF63,TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_049500415 chr17:28743985-28750039 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 415 2 121 8 2 132 723 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_152700411 chr17:28744023-28749488 Sample_02_1527 Embryo naive embryonic stem cell 411 5 107 8 2 115 584 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_016300088 chr17:28744026-28761354 Sample_02_0163 Prostate C4-2B_SR2211_24h 88 4 420 34 9 292 1611 C17ORF63,TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_067600105 chr17:28744028-28763799 Sample_02_0676 Embryo H1 hESC-derived neural progenitor cells_Smad_3hr 105 5 476 38 11 293 1611 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_107800602 chr17:28744032-28748493 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 602 3 89 8 2 87 391 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_067800399 chr17:28744035-28747667 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 399 2 72 6 1 68 227 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_055600665 chr17:28744036-28746376 Sample_02_0556 iPSCs BOFS hiPSC cl1 665 1 44 4 1 61 119 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_050900323 chr17:28744036-28748381 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 323 1 85 6 1 87 368 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_120400489 chr17:28744041-28765270 Sample_02_1204 Brain NB2 489 5 513 40 11 293 1605 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_120300767 chr17:28744041-28765413 Sample_02_1203 Brain NB1 767 6 519 41 12 293 1605 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_072500441 chr17:28744049-28747521 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 441 4 69 5 1 66 221 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_072600342 chr17:28744049-28747559 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 342 2 71 6 1 67 221 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_055700657 chr17:28744060-28747273 Sample_02_0557 iPSCs WT hiPSC#1 657 1 65 4 1 64 177 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_051400154 chr17:28744066-28747923 Sample_02_0514 Prostate LNCaP95_shARfl_DHT 154 3 79 6 1 65 279 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_116100088 chr17:28744076-28763002 Sample_02_1161 Embryo H1_shZNF587 88 7 463 37 11 289 1598 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_056000755 chr17:28744096-28746010 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 755 1 33 4 1 50 103 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_055900734 chr17:28744164-28746796 Sample_02_0559 iPSCs FX52 iPSCs dC-T 734 1 53 4 1 55 90 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_104901760 chr17:28744322-28749164 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1760 1 95 8 2 82 441 TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_156700526 chr17:28744439-28765875 Sample_02_1567 iPSCs CiPSC 526 6 522 41 12 269 1488 FAM222B,TRAF4,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,NEK8,RPL23A
SE_02_037600485 chr17:28745571-28747388 Sample_02_0376 Skeletal muscle RMS237 485 2 38 1 0 26 88 TRAF4,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,SNORD42B
SE_02_157200679 chr17:28759239-28764465 Sample_02_1572 iPSCs FiPSC 679 1 122 6 3 62 175 FAM222B,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,TRAF4,NEK8,RPL23A
SE_02_003601303 chr17:28760475-28762665 Sample_02_0036 Embryo H7 1303 1 45 4 3 20 0 C17ORF63,RAB34,SNORD42A,RPL23A,PROCA1,SNORD4A,SNORD4B,NEK8,TLCD1,TRAF4,SNORD42B
Genomic distribution of SEs associated with TRAF4
Genome Browser

The strength of the tissue affected by the gene

Expression of TRAF4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)