Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_073400322 chr1:120062700-120143467 80767 322 19 16597640305202 NOTCH2,SEC22B
SE_02_073400134 chr1:121215659-121272633 56974 134 13 1372800660 SRGAP2C,FAM72B
SE_02_073400235 chr1:144007410-144042354 34944 235 9 01303570 SRGAP2D,FAM72C
SE_02_073400058 chr1:145007065-145065212 58147 58 12 94850620 SRGAP2B,FAM72D
SE_02_073400269 chr1:146220601-146294540 73939 269 19 121160183184 NOTCH2NL,NUDT4P2,NUDT4P1
SE_02_073400228 chr1:148673376-148759135 85759 228 22 1772101440 NUDT4P2,NUDT4P1,PDE4DIP,NBPF14
SE_02_073400359 chr1:149364945-149399426 34481 359 10 0151000 PPIAL4C,LINC00869
SE_02_073400215 chr1:150148544-150166651 18107 215 3 53164301141126 PLEKHO1
SE_02_073400116 chr1:150560260-150579610 19350 116 4 508874381781 ADAMTSL4,MCL1,ADAMTSL4-AS1,FALEC,ENSA,MIR4257
SE_02_073400293 chr1:154998765-155018495 19730 293 8 41418726331652 ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1
SE_02_073400308 chr1:155967019-155990033 23014 308 4 4994821169981 ARHGEF2,RXFP4,SCARNA4,SSR2,MIR6738,KIAA0907,SNORA80E
SE_02_073400072 chr1:156479907-156508532 28625 72 7 7301798259773 MEF2D
SE_02_073400288 chr1:157723278-157740547 17269 288 8 53288400 FCRL2,FCRL3
SE_02_073400076 chr1:157757936-157809129 51193 76 9 15061668311383 FCRL2,FCRL1,CD5L
SE_02_073400180 chr1:158147325-158177872 30547 180 8 72858300 LOC646268,CD1D
SE_02_073400247 chr1:159005206-159017422 12216 247 3 307105111235 IFI16
SE_02_073400397 chr1:15947663-15976897 29234 397 8 706444358349 ZBTB17,CLCNKA,HSPB7,C1ORF64
SE_02_073400220 chr1:167615669-167651204 35535 220 8 1008252552155 RCSD1
SE_02_073400325 chr1:169106309-169139679 33370 325 9 9137499153479 NME7,ATP1B1,LINC00970
SE_02_073400036 chr1:173404152-173431284 27132 36 3 723485322143 LOC100506023,LOC101928673,PRDX6
SE_02_073400329 chr1:174962306-174971145 8839 329 1 14957039102 RABGAP1L,LOC101928696,CACYBP
SE_02_073400176 chr1:181124816-181153737 28921 176 9 85221551240 IER5,LOC101928973
SE_02_073400387 chr1:183469712-183483604 13892 387 5 347105191549 SMG7-AS1,SMG7
SE_02_073400038 chr1:198619036-198702366 83330 38 28 211612113167325 PTPRC
SE_02_073400348 chr1:203172361-203191117 18756 348 5 61121041241548 MYBPH,CHI3L1,CHIT1,ADORA1
SE_02_073400298 chr1:203321221-203327428 6207 298 1 157191390 LINC01353,LINC01136,BTG2,FMOD
SE_02_073400168 chr1:204480808-204532845 52037 168 13 1409464764669 MDM4,PIK3C2B
SE_02_073400251 chr1:205274144-205319793 45649 251 8 1249679152391050 NUAK2,TMCC2,KLHDC8A
SE_02_073400012 chr1:206030045-206067291 37246 12 4 27923201589 C1ORF186,AVPR1B,CTSE,RAB7B
SE_02_073400105 chr1:206238388-206291459 53071 105 18 9111601720 SRGAP2,FAM72A
SE_02_073400386 chr1:206554814-206583741 28927 386 8 758327243299 RASSF5,EIF2D
SE_02_073400349 chr1:207807095-207833588 26493 349 7 61217412041018 LOC148696,MIR29C,MIR29B2
SE_02_073400056 chr1:234925266-234989339 64073 56 14 18523345203308 LOC101927851
SE_02_073400141 chr1:23545074-23621021 75947 141 17 21503233338584 ID3,E2F2,LOC101928163,MDS2
SE_02_073400406 chr1:23718382-23748405 30023 406 8 725570146175 TCEB3,TCEB3-AS1,RPL11,LYPLA2,PITHD1
SE_02_073400199 chr1:247407817-247446024 38207 199 11 1150205864973 NLRP3,OR2B11,OR2W5
SE_02_073400328 chr1:30741520-30775325 33805 328 10 1074190145312 LAPTM5,MIR4420,MATN1,MATN1-AS1
SE_02_073400323 chr1:31926245-31964172 37927 323 14 100618420226 PTP4A2,KHDRBS1
SE_02_073400388 chr1:44806426-44820607 14181 388 2 4683001781208 BTBD19,PTCH2,TCTEX1D4,SNORD38A,PLK3,RPS8,SNORD38B,SNORD55,BEST4,SNORD46
SE_02_073400333 chr1:52628710-52642647 13937 333 3 348207032216 FAM159A,GPX7
SE_02_073400070 chr1:66327774-66403499 75725 70 22 197015116349741 PDE4B
SE_02_073400109 chr1:92944675-93005530 60855 109 11 1504727886160 FAM69A
SE_02_073400037 chr1_GL383520v2_alt:254108-343784 89676 37 25 00000 PTPRC
SE_02_073400283 chr10:101669891-101727936 58045 283 11 11173561316508 FBXW4,FGF8
SE_02_073400021 chr10:110792588-110894807 102219 21 26 2810121043402096 PDCD4,PDCD4-AS1,RBM20,SHOC2,BBIP1,RPL13AP6,MIR4680
SE_02_073400183 chr10:11160858-11181052 20194 183 4 622448120201 CELF2
SE_02_073400330 chr10:123381075-123404960 23885 330 5 714191490 BUB3
SE_02_073400278 chr10:124034017-124088182 54165 278 22 16372481252473 CHST15
SE_02_073400244 chr10:124717272-124745153 27881 244 6 7454234168183 FAM53B,METTL10,FAM53B-AS1
SE_02_073400313 chr10:132407587-132453001 45414 313 12 1605181256686 C10ORF91,PWWP2B
SE_02_073400095 chr10:26408417-26488234 79817 95 25 220544451526198 APBB1IP
SE_02_073400294 chr10:32938153-33006572 68419 294 24 17706761466318 ITGB1
SE_02_073400279 chr10:48660132-48687586 27454 279 5 81811608212 WDFY4,ARHGAP22
SE_02_073400296 chr10:63255225-63269231 14006 296 2 35412627075 JMJD1C
SE_02_073400047 chr10:7409196-7494738 85542 47 16 27949669163176 SFMBT2
SE_02_073400162 chr10:79242244-79297535 55291 162 13 172395132421386 ZMIZ1,PPIF
SE_02_073400355 chr10:88879400-88903958 24558 355 5 614133811045 STAMBPL1,ANKRD22,ACTA2,ACTA2-AS1
SE_02_073400140 chr10:95754862-95793758 38896 140 14 8751247582305 ENTPD1-AS1,ENTPD1
SE_02_073400211 chr10:96266933-96292787 25854 211 3 6344705579 BLNK,DNTT
SE_02_073400318 chr10:96695217-96748123 52906 318 15 1375871059281 PIK3AP1,RPL13AP5
SE_02_073400200 chr11:10302421-10312538 10117 200 1 217716110530 CAND1.11,ADM,SBF2
SE_02_073400224 chr11:10313149-10322043 8894 224 1 204872470 CAND1.11,ADM,SBF2
SE_02_073400384 chr11:115868295-115896630 28335 384 7 8343721220 LINC00900,BUD13
SE_02_073400115 chr11:115910217-115942093 31876 115 7 9129472590 LINC00900,BUD13
SE_02_073400125 chr11:117985128-118016645 31517 125 10 9511376991476 IL10RA,TMPRSS4-AS1
SE_02_073400111 chr11:119666423-119730739 64316 111 19 18982660556729 PVRL1,LOC102724301
SE_02_073400102 chr11:127617133-127649580 32447 102 13 870312050 LOC101929497,KIRREL3-AS3
SE_02_073400266 chr11:128462719-128502503 39784 266 9 1078241311430 ETS1,MIR6090,LOC101929517
SE_02_073400342 chr11:128830249-128849454 19205 342 10 5681024116330 KCNJ1,KCNJ5
SE_02_073400255 chr11:130132690-130190368 57678 255 21 173814131651376 APLP2,ST14
SE_02_073400128 chr11:14307912-14343020 35108 128 11 866993550 RRAS2
SE_02_073400146 chr11:19428253-19456415 28162 146 7 786576470 NAV2,NAV2-AS5
SE_02_073400152 chr11:21404131-21421269 17138 152 4 56906530 NELL1
SE_02_073400357 chr11:21447062-21495075 48013 357 12 1413234900 NELL1,ANO5
SE_02_073400362 chr11:26078414-26112560 34146 362 9 112438100 ANO3
SE_02_073400177 chr11:44592882-44616955 24073 177 8 70276128469 CD82
SE_02_073400227 chr11:65471113-65508887 37774 227 11 10811741450963 MALAT1,SCYL1,LTBP3,NEAT1,MIR612
SE_02_073400206 chr11:67266457-67290154 23697 206 5 64322202392288 ANKRD13D,ADRBK1,KDM2A,SSH3,LOC100130987
SE_02_073400069 chr11:69624182-69650699 26517 69 5 793714120603 CCND1,ORAOV1
SE_02_073400373 chr11:72808133-72832005 23872 373 5 7011981922152 ATG16L2,STARD10,MIR4692
SE_02_073400019 chr11:73137175-73190335 53160 19 20 13852478228211 FCHSD2,P2RY2
SE_02_073400112 chr11:73359514-73393579 34065 112 6 96228602702443 RELT,ARHGEF17
SE_02_073400213 chr11:73978708-73992455 13747 213 4 348560115221 UCP2,UCP3,DNAJB13
SE_02_073400237 chr11:7495167-7534574 39407 237 9 11274854124570 PPFIBP2,OLFML1,LOC100506258
SE_02_073400133 chr11:82955671-83008632 52961 133 12 12315161167534 RAB30,SNORA70E
SE_02_073400268 chr11:83054279-83074071 19792 268 6 507241088292 RAB30-AS1,RAB30,SNORA70E
SE_02_073400409 chr11:86159375-86220848 61473 409 11 186142241100 EED
SE_02_073400204 chr11:9610669-9617993 7324 204 1 202710220 WEE1,SWAP70
SE_02_073400207 chr11:9660660-9670843 10183 207 1 29972018159 SWAP70
SE_02_073400231 chr11:9686865-9695083 8218 231 1 1963303170 SWAP70
SE_02_073400304 chr12:108531695-108571312 39617 304 12 10525664981686 SART3,ISCU,FICD,TMEM119
SE_02_073400282 chr12:108616570-108646714 30144 282 10 8802672341009 CORO1C,SELPLG,MIR4496,TMEM119
SE_02_073400025 chr12:113048223-113100071 51848 25 9 14984333401652 RASAL1,DTX1,CCDC42B
SE_02_073400013 chr12:11724742-11840943 116201 13 28 330112318453162 ETV6
SE_02_073400243 chr12:121513984-121563884 49900 243 12 1327212081533 KDM2B
SE_02_073400345 chr12:121796328-121805703 9375 345 1 25113201421168 SETD1B,LINC01089,RHOF
SE_02_073400232 chr12:121968597-122033290 64693 232 20 1981105833179790 WDR66,BCL7A,MLXIP
SE_02_073400272 chr12:123425436-123460445 35009 272 10 10251114020560 SNRNP35,RILPL2,SETD8
SE_02_073400212 chr12:14238545-14285110 46565 212 15 1323877260 ATF7IP
SE_02_073400185 chr12:14947288-14964826 17538 185 1 543220639205 ARHGDIB,LINC01489,PDE6H,ERP27
SE_02_073400338 chr12:26112737-26131598 18861 338 4 456502165740 BHLHE41
SE_02_073400393 chr12:46206431-46228033 21602 393 6 62111373791 SLC38A1
SE_02_073400169 chr12:46360467-46393480 33013 169 6 8432310157634 SLC38A2,LOC100288798
SE_02_073400383 chr12:70459299-70494729 35430 383 6 96013113120 KCNMB4
SE_02_073400048 chr12:92431044-92506739 75695 48 14 20892797232300 CLLU1OS,CLLU1
SE_02_073400086 chr12:9634403-9674973 40570 86 5 1127222830700 LOC374443,CLEC2D,KLRB1
SE_02_073400041 chr12:9705662-9744126 38464 41 9 1075243150311 CLECL1,CD69,CLEC2D
SE_02_073400260 chr13:109963158-109985255 22097 260 3 7141401160 LINC00396
SE_02_073400164 chr13:40960491-41020415 59924 164 17 14106972412382 ELF1,WBP4,SUGT1P3,TPTE2P5
SE_02_073400399 chr13:46160349-46184559 24210 399 11 69580773131 LCP1,LRRC63
SE_02_073400018 chr13:91345489-91350651 5162 18 2 10630129231 MIR17HG,MIR17,MIR92A1,MIR19B1,MIR20A,MIR19A,GPC5,MIR18A
SE_02_073400060 chr13:99254622-99348979 94357 60 23 248178811219553 UBAC2,GPR18,GPR183,MIR623,FKSG29
SE_02_073400233 chr14:102896406-102950352 53946 233 14 185530722414215 AMN,TRAF3,CDC42BPB
SE_02_073400126 chr14:103091334-103141236 49902 126 12 158145352313221 EXOC3L4,TNFAIP2,LINC00605,CDC42BPB
SE_02_073400223 chr14:103679621-103704571 24950 223 9 87211002462186 KLC1,XRCC3,ZFYVE21
SE_02_073400139 chr14:104222695-104243508 20813 139 5 690126180 KIF26A,MIR203B
SE_02_073400045 chr14:104919469-104933477 14008 45 3 4284883451370 PLD4,AHNAK2
SE_02_073400142 chr14:105059491-105087751 28260 142 5 88553007102 GPR132,CDCA4,LOC102723354
SE_02_073400003 chr14:105556826-105592278 35452 3 5 1184203079491 TMEM121,MIR8071-1
SE_02_073400405 chr14:105612808-105649767 36959 405 9 15697990401639 MIR8071-2,MIR8071-1,ELK2AP
SE_02_073400004 chr14:105667858-105712999 45141 4 9 14189211851474 ELK2AP,MIR8071-1
SE_02_073400351 chr14:105741197-105749589 8392 351 3 630140028956 ELK2AP
SE_02_073400157 chr14:105768641-105779307 10666 157 2 618298022954 MIR4539
SE_02_073400181 chr14:105814570-105822770 8200 181 3 176780037 MIR4539,MIR4538,MIR4507,MIR4537
SE_02_073400064 chr14:105851186-105864370 13184 64 1 13951170691363 MIR4537,MIR4507,MIR4538,MIR4539
SE_02_073400305 chr14:68250525-68294266 43741 305 18 10731131115475 RAD51B
SE_02_073400040 chr14:75466862-75561051 94189 40 22 27273229192926 JDP2,BATF,LOC102724153,FLVCR2
SE_02_073400088 chr14:80929491-80990167 60676 88 19 16826811465384 CEP128,TSHR
SE_02_073400154 chr14:89262521-89309931 47410 154 9 139251812068 FOXN3
SE_02_073400066 chr14:91346136-91426172 80036 66 30 246330312182760 CCDC88C
SE_02_073400254 chr14:95479604-95534647 55043 254 11 16955454131235 SCARNA13,SNHG10,SYNE3,GLRX5
SE_02_073400334 chr14:95694320-95714148 19828 334 5 7004126535 TCL1A,TCL1B,TCL6
SE_02_073400005 chr14_KI270846v1_alt:143484-180769 37285 5 6 00000
SE_02_073400347 chr14_KI270846v1_alt:202416-217412 14996 347 3 00000
SE_02_073400160 chr14_KI270846v1_alt:236407-247120 10713 160 2 00000
SE_02_073400002 chr14_KI270846v1_alt:23963-60505 36542 2 6 00000
SE_02_073400187 chr14_KI270846v1_alt:283106-291237 8131 187 4 00000
SE_02_073400063 chr14_KI270846v1_alt:315521-332132 16611 63 4 00000 MIR4538,MIR4537,MIR4507,MIR4539
SE_02_073400144 chr15:100902306-100960093 57787 144 17 17452729871541 ALDH1A3,LRRK1
SE_02_073400053 chr15:40044694-40118254 73560 53 12 20791194153711833 SRP14-AS1,BMF,BUB1B,SRP14
SE_02_073400184 chr15:63472451-63517710 45259 184 12 12054122208198 USP3
SE_02_073400198 chr15:67067904-67122394 54490 198 22 1528192102250 SMAD3
SE_02_073400292 chr15:67767122-67805963 38841 292 8 1013672935086 MAP2K5,SKOR1,LOC101929076
SE_02_073400051 chr15:74771242-74800933 29691 51 7 71010412222938 CSK,MIR4513,CYP1A1,CPLX3,MIR6882,LMAN1L,CYP1A2,ULK3
SE_02_073400195 chr15:75006432-75073798 67366 195 15 16572354221781984 PPCDC,SCAMP5,RPP25
SE_02_073400119 chr15:81265603-81318797 53194 119 13 154569961762369 IL16,STARD5,TMC3-AS1
SE_02_073400147 chr15:92807772-92853633 45861 147 9 14691010560 CHD2,LINC01578,ASB9P1
SE_02_073400094 chr16:11668404-11691926 23522 94 5 80433041021059 SNN,TXNDC11
SE_02_073400104 chr16:11759582-11811039 51457 104 17 16543002102854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_073400192 chr16:2467322-2512155 44833 192 13 135535302582668 NTN3,TBC1D24,CEMP1,CCNF,MIR3178,C16ORF59,PDPK1,ATP6V0C,MIR6768,MIR6767,AMDHD2
SE_02_073400099 chr16:53054276-53132537 78261 99 20 19572803234187 CHD9
SE_02_073400320 chr16:68356759-68385392 28633 320 6 905225521721759 SMPD3,PRMT7,SLC7A6OS
SE_02_073400246 chr16:70403752-70439198 35446 246 11 10111042196140 ST3GAL2,FUK,RNU6-23P
SE_02_073400350 chr16:74575146-74607127 31981 350 7 10671361347149 GLG1
SE_02_073400030 chr16:81773698-81875550 101852 30 17 476917391078560 PLCG2
SE_02_073400326 chr16:84131865-84142101 10236 326 3 3552043558 HSDL1,ADAD2,DNAAF1,TAF1C,MBTPS1
SE_02_073400364 chr16:85523460-85572008 48548 364 10 17625702700 GSE1
SE_02_073400340 chr16:87801719-87812908 11189 340 4 44897100 KLHDC4,LOC102724467,MIR6775
SE_02_073400352 chr16:88965954-89005113 39159 352 12 1589637496237 CBFA2T3,LOC100129697
SE_02_073400358 chr17:12418655-12436750 18095 358 9 55331670 LINC00670
SE_02_073400196 chr17:28736856-28747965 11109 196 1 27012321431347 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_073400156 chr17:31307128-31321712 14584 156 1 368246158299 EVI2B,NF1,EVI2A,OMG
SE_02_073400124 chr17:39752839-39820642 67803 124 18 15091546123801345 IKZF3,GRB7,MIR4728,MIEN1,ZPBP2
SE_02_073400079 chr17:40530907-40625428 94521 79 21 25745505248572 CCR7,TNS4,SMARCE1,KRT222
SE_02_073400366 chr17:45221125-45231959 10834 366 1 2882450111502 FMNL1,MAP3K14-AS1,SPATA32
SE_02_073400148 chr17:58332652-58346133 13481 148 2 354293470394 BZRAP1-AS1,SUPT4H1,MIR4736,MIR142,BZRAP1
SE_02_073400031 chr17:59752329-59853822 101493 31 23 220016147263436 MIR21,VMP1,PTRH2,RPS6KB1,TUBD1
SE_02_073400238 chr17:60085597-60103205 17608 238 2 40576217256 WFDC21P,LOC653653,CA4,MIR4737,HEATR6
SE_02_073400286 chr17:64964074-64989316 25242 286 8 655262453524 AMZ2P1,LRRC37A3
SE_02_073400335 chr17:68201151-68257211 56060 335 12 16652019257596 AMZ2,SLC16A6,ARSG,LOC440461
SE_02_073400252 chr17:68474114-68515011 40897 252 9 103937520340 PRKAR1A,MIR635,WIPI1,FAM20A
SE_02_073400174 chr17:69091993-69132065 40072 174 12 1049274463659 ABCA6,MIR4524A,MIR4524B,ABCA9
SE_02_073400314 chr17:75289664-75324296 34632 314 15 9751280863567 GRB2,LOC100287042,MRPS7,MIF4GD,SLC25A19,GGA3
SE_02_073400153 chr17:76245601-76279080 33479 153 8 1053110321691318 QRICH2,UBALD2,RNF157
SE_02_073400377 chr17:76479586-76501395 21809 377 7 753656157887 RHBDF2,PRCD,AANAT,UBE2O,CYGB
SE_02_073400027 chr17:77389034-77495069 106035 27 20 359453812592426 SEPT9,MIR4316
SE_02_073400034 chr17_GL000205v2_random:54039-90834 36795 34 12 00000 MGC70870
SE_02_073400068 chr18:55063398-55109375 45977 68 15 11961115175235 LOC101927229
SE_02_073400010 chr18:55219776-55282040 62264 10 13 148549116071363 TCF4
SE_02_073400039 chr18:55312223-55337474 25251 39 5 5366134275 TCF4
SE_02_073400028 chr18:55402071-55489693 87622 28 18 20658312634323 TCF4,MIR4529
SE_02_073400271 chr18:55505084-55512125 7041 271 1 175713845 TCF4,MIR4529
SE_02_073400075 chr18:58090560-58118391 27831 75 12 868673430 NEDD4L
SE_02_073400118 chr18:58962954-58976391 13437 118 2 34618390 ZNF532,OACYLP
SE_02_073400006 chr18:59834371-59988186 153815 6 36 448926721150366 PMAIP1
SE_02_073400365 chr18:62523012-62531177 8165 365 2 22745099371 ZCCHC2
SE_02_073400001 chr18:63131290-63225634 94344 1 17 2501102113830 BCL2
SE_02_073400007 chr18:63259869-63323128 63259 7 14 16552213317319 BCL2,KDSR
SE_02_073400059 chr18:67820577-67845163 24586 59 8 7741360101 LOC643542,DSEL
SE_02_073400071 chr18:9054453-9121041 66588 71 15 1707496312234 NDUFV2,ANKRD12,NDUFV2-AS1
SE_02_073400259 chr19:12777776-12796538 18762 259 5 4222371304517 JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1
SE_02_073400182 chr19:1646841-1672789 25948 182 10 87362151285 TCF3,UQCR11
SE_02_073400407 chr19:16581318-16595269 13951 407 7 3501652260 MED26,CHERP,SLC35E1
SE_02_073400101 chr19:2035333-2096617 61284 101 18 216720231363154 MOB3A,MKNK2,IZUMO4,BTBD2
SE_02_073400159 chr19:28576470-28634415 57945 159 23 20183673290 LOC100420587
SE_02_073400270 chr19:38031428-38081660 50232 270 6 134473016199 SIPA1L3
SE_02_073400287 chr19:42121941-42134152 12211 287 1 29936060552 POU2F2,MIR4323,LOC100505622,ZNF574
SE_02_073400123 chr19:6555314-6606545 51231 123 12 151621540488 CD70,TNFSF9
SE_02_073400016 chr2:111402462-111495899 93437 16 19 17771231276314 MIR4435-2HG
SE_02_073400339 chr2:111697926-111708424 10498 339 2 311470360 ANAPC1
SE_02_073400170 chr2:136106157-136139619 33462 170 7 846888254463 CXCR4
SE_02_073400327 chr2:136204974-136256929 51955 327 9 13522697550 CXCR4
SE_02_073400240 chr2:143127325-143160719 33394 240 7 889132628779 ARHGAP15
SE_02_073400319 chr2:165189074-165204008 14934 319 2 3351308523 SCN3A,SCN2A
SE_02_073400202 chr2:171316206-171348307 32101 202 10 8081270179902 METTL8,TLK1
SE_02_073400221 chr2:179019887-179060914 41027 221 8 1282608511485 CCDC141
SE_02_073400410 chr2:181303884-181315626 11742 410 1 2352715344 MIR4437,LOC101927156
SE_02_073400163 chr2:191610475-191686683 76208 163 15 20562857190560 NABP1,LOC105747689
SE_02_073400363 chr2:195557839-195581853 24014 363 10 583710650 SLC39A10
SE_02_073400300 chr2:196098408-196113517 15109 300 4 3622083320 DNAH7
SE_02_073400315 chr2:196148695-196178544 29849 315 9 841388580312 STK17B
SE_02_073400131 chr2:197128483-197161806 33323 131 10 823178272401 ANKRD44,ANKRD44-IT1
SE_02_073400150 chr2:197190869-197219953 29084 150 7 7299968848 ANKRD44,ANKRD44-IT1
SE_02_073400317 chr2:197238972-197264076 25104 317 8 627862810 ANKRD44-IT1,ANKRD44
SE_02_073400055 chr2:197281532-197310825 29293 55 5 6922801271108 ANKRD44-IT1,ANKRD44
SE_02_073400114 chr2:201115249-201135589 20340 114 2 457553235464 CFLAR,CASP10,FAM126B,CFLAR-AS1,NDUFB3
SE_02_073400054 chr2:218871548-218910486 38938 54 5 9047963961376 LINC01494,WNT10A,WNT6,MIR9500,CDK5R2,PRKAG3
SE_02_073400242 chr2:225026419-225053359 26940 242 10 705980106213 DOCK10,MIR4439
SE_02_073400276 chr2:225109767-225125732 15965 276 8 45050670 DOCK10
SE_02_073400149 chr2:225268304-225282942 14638 149 5 40280200 NYAP2,DOCK10
SE_02_073400291 chr2:230202215-230230616 28401 291 8 6751091552813 SP140,SP110
SE_02_073400248 chr2:230866858-230896290 29432 248 6 99436901001122 ITM2C,LOC151484,GPR55
SE_02_073400084 chr2:231660715-231688209 27494 84 7 836523770 PTMA,MIR1244-2
SE_02_073400316 chr2:231705323-231721643 16320 316 7 54214131601070 PTMA,MIR1244-2
SE_02_073400062 chr2:233059237-233102457 43220 62 10 1339172679198 INPP5D,NGEF,NEU2
SE_02_073400398 chr2:233513032-233523005 9973 398 3 22860112257 USP40
SE_02_073400090 chr2:237864800-237906747 41947 90 10 1363190658131 RAMP1
SE_02_073400203 chr2:241109951-241149478 39527 203 4 147520497881987 PASK,PPP1R7,ANO7,MTERF4
SE_02_073400250 chr2:54557729-54596357 38628 250 7 11959065102175 SPTBN1,RPL23AP32
SE_02_073400274 chr2:64635602-64681765 46163 274 7 1111581210451 SERTAD2,LOC339807
SE_02_073400275 chr2:64904379-64947589 43210 275 10 1243965724200 LOC400958,SLC1A4,LOC101927438
SE_02_073400135 chr2:65350398-65438787 88389 135 23 238685338322405 SPRED2
SE_02_073400280 chr2:68357733-68391747 34014 280 12 1005362562431 PLEK,CNRIP1
SE_02_073400264 chr2:68410204-68443551 33347 264 8 10322361480 APLF,PLEK,FBXO48
SE_02_073400065 chr2:68709679-68797188 87509 65 16 24734358110516 ARHGAP25
SE_02_073400370 chr2:74018899-74039312 20413 370 6 520860170 TET3,DGUOK-AS1
SE_02_073400057 chr2:8513572-8554321 40749 57 11 12721941470 LOC101929567
SE_02_073400173 chr2:8570495-8586800 16305 173 3 5221020670 LOC101929567
SE_02_073400015 chr2:87455455-87548266 92811 15 22 18344600269329 LINC00152
SE_02_073400404 chr2:96142936-96174460 31524 404 6 7966090117608 DUSP2,ASTL,ADRA2B,STARD7-AS1,STARD7
SE_02_073400137 chr2:97906393-97938160 31767 137 3 782512426484 TMEM131
SE_02_073400222 chr20:32031872-32070013 38141 222 12 981227162327 HCK,CCM2L,TM9SF4
SE_02_073400127 chr20:34385293-34420664 35371 127 10 870909119220 ITCH,MIR644A
SE_02_073400281 chr20:36835028-36867226 32198 281 9 747154394645 SOGA1,TLDC2
SE_02_073400302 chr20:40968997-41015333 46336 302 17 116823027364 TOP1
SE_02_073400290 chr20:44576462-44609787 33325 290 15 794144048190 PKIG,ADA
SE_02_073400346 chr20:48738976-48800666 61690 346 14 18852591177160 PREX1
SE_02_073400378 chr20:49775801-49833975 58174 378 14 1614490917287 SLC9A8
SE_02_073400178 chr20:50510378-50555382 45004 178 11 114219026292 PTPN1,MIR645
SE_02_073400136 chr20:53579034-53624499 45465 136 5 1108301168449 ZNF217,LOC101927770
SE_02_073400341 chr20:53641875-53661799 19924 341 8 524252430 ZNF217
SE_02_073400193 chr21:33360515-33405571 45056 193 12 1197393525327 IFNGR2,IFNAR1
SE_02_073400171 chr21:42219113-42259111 39998 171 14 120336895375 ABCG1
SE_02_073400225 chr21:42450184-42479653 29469 225 6 99742765315 RSPH1,UBASH3A,SLC37A1
SE_02_073400390 chr21:42503811-42537426 33615 390 11 975516253607 SLC37A1,RSPH1
SE_02_073400194 chr21:44132785-44215666 82881 194 22 292021731228785 C21ORF33,ICOSLG,DNMT3L
SE_02_073400190 chr21:5042996-5128413 85417 190 21 1327000 C21ORF33,ICOSLG,PWP2
SE_02_073400120 chr21:6368380-6374592 6212 120 3 00000 CBS
SE_02_073400371 chr22:17770275-17801656 31381 371 9 1077745651199 MICAL3,LINC00528,BID,MIR3198-1
SE_02_073400011 chr22:22895469-22956047 60578 11 12 25468501001786 IGLL5,MIR5571,GNAZ
SE_02_073400155 chr22:24423643-24443256 19613 155 2 5521944851802 ADORA2A,ADORA2A-AS1,SPECC1L-ADORA2A
SE_02_073400087 chr22:37607355-37641624 34269 87 9 105455332243321 GGA1,SH3BP1,NOL12,LGALS2,LOC101927051,PDXP,LGALS1,CDC42EP1
SE_02_073400336 chr22:46052301-46072959 20658 336 3 5391833186685 PRR34,PRR34-AS1,MIR3619,LINC00899,LOC730668,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_073400306 chr22:46561275-46614837 53562 306 11 19317496510 GRAMD4,CELSR1
SE_02_073400265 chr22:46759033-46778511 19478 265 3 644149045468 TBC1D22A,CERK
SE_02_073400343 chr3:101813958-101852500 38542 343 10 87525531441097 NXPE3,NFKBIZ
SE_02_073400083 chr3:105795829-105868973 73144 83 27 19372737232188 CBLB
SE_02_073400096 chr3:119537590-119588783 51193 96 12 148710211376868 ADPRH,CD80,TIMMDC1,PLA1A
SE_02_073400253 chr3:122053269-122112567 59298 253 13 137436810118385 CD86,ILDR1
SE_02_073400295 chr3:122568486-122591026 22540 295 4 6151507231837 PARP15,DTX3L,PARP9
SE_02_073400074 chr3:126908198-126984779 76581 74 21 21126302198355 CHCHD6,PLXNA1
SE_02_073400080 chr3:127728329-127776381 48052 80 10 1502239951108 MGLL
SE_02_073400049 chr3:12973209-13049033 75824 49 21 22422016250103 IQSEC1
SE_02_073400273 chr3:133424768-133491823 67055 273 24 19803128119695 BFSP2,CDV3
SE_02_073400299 chr3:138565027-138598547 33520 299 5 909634123262 CEP70,FAIM
SE_02_073400360 chr3:150597695-150608152 10457 360 1 269132017150 SELT
SE_02_073400097 chr3:152193003-152206946 13943 97 2 373271230 MBNL1
SE_02_073400285 chr3:152241790-152285155 43365 285 12 9231311173796 MBNL1-AS1,MBNL1
SE_02_073400179 chr3:152373541-152387206 13665 179 4 3231210350 MBNL1,TMEM14E
SE_02_073400256 chr3:15343904-15389025 45121 256 13 12096732180 EAF1,SH3BP5,METTL6
SE_02_073400020 chr3:160755610-160901011 145401 20 32 3722150012275281 PPM1L
SE_02_073400385 chr3:16884145-16929904 45759 385 13 1082467156187 PLCL2,MIR3714
SE_02_073400403 chr3:169929921-169955070 25149 403 8 686150232874 LOC100128164,SAMD7,SEC62
SE_02_073400188 chr3:170119219-170181714 62495 188 10 155632201501185 PHC3,PRKCI
SE_02_073400117 chr3:170348450-170372757 24307 117 6 6792214152335 SKIL,CLDN11
SE_02_073400081 chr3:172054804-172109156 54352 81 9 13418511240 FNDC3B
SE_02_073400067 chr3:172130179-172180468 50289 67 9 12645813333 FNDC3B
SE_02_073400052 chr3:177179670-177264488 84818 52 16 2716176279287 TBL1XR1,LINC00501
SE_02_073400014 chr3:177277593-177362310 84717 14 17 23443901780 LINC00501
SE_02_073400093 chr3:183503096-183556342 53246 93 16 1597176075262 KLHL6,KLHL6-AS1
SE_02_073400402 chr3:186976494-187046309 69815 402 17 2077510838317 ST6GAL1
SE_02_073400167 chr3:188573228-188589731 16503 167 3 42614840 LPP,LPP-AS1
SE_02_073400108 chr3:189557549-189577740 20191 108 4 56741220 TP63
SE_02_073400078 chr3:196159645-196196599 36954 78 8 1258415843190 LINC00885,ZDHHC19,SLC51A
SE_02_073400344 chr3:196634840-196645050 10210 344 4 300108614118 NRROS,LINC01063
SE_02_073400382 chr3:197706063-197736890 30827 382 9 867408146187 KIAA0226,FYTTD1,MIR922
SE_02_073400132 chr3:30598217-30667997 69780 132 29 191913310136323 TGFBR2
SE_02_073400209 chr3:32399765-32441695 41930 209 13 11994043111 CMTM7
SE_02_073400100 chr3:5168859-5207172 38313 100 8 1154763194921 ARL8B,EDEM1,MIR4790
SE_02_073400175 chr3:58188143-58218118 29975 175 7 9171045247777 DNASE1L3,ABHD6
SE_02_073400085 chr3:71047948-71151310 103362 85 40 25945141131359 FOXP1
SE_02_073400368 chr3:71531219-71586701 55482 368 14 1442505517777 FOXP1,MIR1284
SE_02_073400143 chr3:93470361-93470801 440 143 1 00000 PROS1
SE_02_073400230 chr4:108353602-108385042 31440 230 7 8361851600 LEF1-AS1
SE_02_073400029 chr4:140704851-140863809 158958 29 34 424933612143216 TBC1D9
SE_02_073400044 chr4:143352164-143423181 71017 44 20 17423681322175 GAB1,MIR3139
SE_02_073400369 chr4:152659204-152697711 38507 369 5 989111174120 TMEM154
SE_02_073400098 chr4:184251980-184291596 39616 98 6 12852907240 ENPP6,LOC728175
SE_02_073400103 chr4:184310056-184354224 44168 103 10 1448383329402 LOC728175,LOC102723766
SE_02_073400267 chr4:26124938-26164148 39210 267 12 1068192620 RBPJ
SE_02_073400033 chr4:40181961-40208500 26539 33 5 792172453106 RHOH
SE_02_073400374 chr4:40288802-40309349 20547 374 6 62410449139 LOC101060498,CHRNA9
SE_02_073400241 chr4:59537310-59576699 39389 241 17 128212260
SE_02_073400214 chr4:658570-684117 25547 214 6 9874460773388 MFSD7,PDE6B,MYL5,ATP5I,PCGF3
SE_02_073400032 chr4:73573996-73626108 52112 32 6 14764522120570 RASSF6
SE_02_073400372 chr4:78734260-78779523 45263 372 8 1111122184215 BMP2K
SE_02_073400379 chr4:8177107-8206750 29643 379 9 1172486237260 SH3TC1,ABLIM2
SE_02_073400307 chr4:85472864-85500066 27202 307 5 65714075195 ARHGAP24
SE_02_073400303 chr4:85678463-85749310 70847 303 27 19402841310776 ARHGAP24,MIR4451
SE_02_073400077 chr4:86927836-86983350 55514 77 16 14516065111360 AFF1,LOC100506746,C4ORF36
SE_02_073400262 chr5:100825319-100859307 33988 262 6 79717036447 ST8SIA4,MIR548P
SE_02_073400236 chr5:10556397-10608665 52268 236 21 1503151557251 ANKRD33B
SE_02_073400337 chr5:10621995-10657033 35038 337 6 11471240571432 ANKRD33B
SE_02_073400380 chr5:111224483-111257384 32901 380 11 902814139373 CAMK4
SE_02_073400411 chr5:115265329-115284376 19047 411 4 470103041271 CCDC112,PGGT1B
SE_02_073400324 chr5:119335921-119368373 32452 324 8 9633673102123 TNFAIP8
SE_02_073400208 chr5:124887427-124965162 77735 208 17 2236323143180 LOC101927421
SE_02_073400089 chr5:131205034-131231311 26277 89 4 6132831937 LYRM7,CDC42SE2,HINT1
SE_02_073400218 chr5:131248243-131288929 40686 218 17 1034351563147 CDC42SE2
SE_02_073400249 chr5:131356102-131395225 39123 249 12 956431139398 CDC42SE2
SE_02_073400061 chr5:134523459-134557175 33716 61 5 8465037392637 JADE2,LOC101927934
SE_02_073400107 chr5:139633658-139690329 56671 107 17 13094324740572 CXXC5
SE_02_073400263 chr5:151052070-151098723 46653 263 10 140335220169989 TNIP1,GPX3,ANXA6
SE_02_073400217 chr5:151195058-151224509 29451 217 10 815554519378 CCDC69,ANXA6,GM2A
SE_02_073400394 chr5:157265517-157292916 27399 394 12 7136692110505 CYFIP2
SE_02_073400258 chr5:160438635-160479942 41307 258 9 1117157553117 MIR3142,ZBED8,PTTG1,MIR146A,SLU7
SE_02_073400261 chr5:56665408-56697942 32534 261 8 86720541390 C5ORF67
SE_02_073400389 chr5:56812396-56856160 43764 389 15 1221101712153363 MAP3K1
SE_02_073400186 chr5:67186547-67222560 36013 186 10 100318528670 CD180
SE_02_073400189 chr5:78719575-78736708 17133 189 1 46571200 LHFPL2
SE_02_073400145 chr5:89267124-89354841 87717 145 23 20222844840 MEF2C
SE_02_073400311 chr6:106613824-106650516 36692 311 10 1032539176488 RTN4IP1,QRSL1
SE_02_073400197 chr6:113623426-113671716 48290 197 13 123318831060 LOC101927686
SE_02_073400158 chr6:116007940-116061380 53440 158 14 127597300395 TPI1P3,FRK,NT5DC1
SE_02_073400216 chr6:11823115-11836309 13194 216 3 375753380 ADTRP
SE_02_073400361 chr6:119346784-119360162 13378 361 3 3631291115426 MAN1A1
SE_02_073400219 chr6:125788965-125816293 27328 219 11 715154081273 NCOA7,NCOA7-AS1,HEY2
SE_02_073400312 chr6:150616188-150648767 32579 312 12 9001082940 PLEKHG1
SE_02_073400121 chr6:16470080-16522824 52744 121 19 128719813081 ATXN1,GMPR
SE_02_073400046 chr6:16649683-16741631 91948 46 23 24018721153214 ATXN1
SE_02_073400035 chr6:216249-328179 111930 35 25 39183986141353 DUSP22,LOC285766
SE_02_073400245 chr6:24919828-24975662 55834 245 10 16113471412970 FAM65B
SE_02_073400391 chr6:25366502-25413569 47067 391 14 1409400433460 LRRC16A
SE_02_073400392 chr6:37005678-37061969 56291 392 10 180456731102048 FGD2,MTCH1
SE_02_073400082 chr6:41698553-41735641 37088 82 9 104320532151092 TFEB,PRICKLE4,PGC,FRS3
SE_02_073400110 chr6:52285095-52318740 33645 110 7 8251070170 IL17F,MCM3,PAQR8
SE_02_073400309 chr6:74569464-74608182 38718 309 12 896660670 LOC101928516,COX7A2
SE_02_073400106 chr7:102412888-102452429 39541 106 10 117716355682310 LOC100630923,PRKRIP1,ORAI2,LOC100289561,POLR2J,ALKBH4,MIR4467,MIR5090,LRWD1,MIR548O
SE_02_073400375 chr7:102494394-102517811 23417 375 3 93180951691 RASA4B,POLR2J,ALKBH4,MIR4467,MIR5090,LRWD1,SPDYE2B
SE_02_073400412 chr7:102607091-102616826 9735 412 2 289033652 RASA4B,RASA4,POLR2J3,UPK3BL
SE_02_073400138 chr7:106863029-106897334 34305 138 12 842331204756 PIK3CG
SE_02_073400301 chr7:114915040-114946172 31132 301 9 756680183423 MDFIC
SE_02_073400091 chr7:116135854-116173671 37817 91 10 95426304928 TES
SE_02_073400332 chr7:128932947-128965100 32153 332 6 858928131341709 TNPO3,IRF5,KCP
SE_02_073400297 chr7:139695405-139732720 37315 297 16 765902115193 HIPK2,TBXAS1
SE_02_073400050 chr7:150285888-150326206 40318 50 11 1122127350721 ACTR3C,LRRC61,REPIN1,ZBED6CL,RARRES2
SE_02_073400130 chr7:150361696-150379131 17435 130 1 48490931321165 REPIN1,ZNF775,LRRC61,LOC728743,ZBED6CL,RARRES2,ACTR3C
SE_02_073400151 chr7:155721113-155770638 49525 151 12 14081080174638 RBM33,SHH
SE_02_073400331 chr7:17121441-17156977 35536 331 10 1079441370 AHR
SE_02_073400009 chr7:18494851-18576645 81794 9 11 208883356252 HDAC9
SE_02_073400161 chr7:20186914-20222672 35758 161 6 102519319657 MACC1,LOC101927668,MACC1-AS1
SE_02_073400395 chr7:23463817-23478084 14267 395 4 313921132262 IGF2BP3,RPS2P32
SE_02_073400239 chr7:29270712-29298110 27398 239 10 7908887542 CHN2,LOC102724484
SE_02_073400408 chr7:44614312-44640744 26432 408 6 78031433368 OGDH,DDX56,TMED4
SE_02_073400354 chr7:50141932-50167877 25945 354 4 763102056168 C7ORF72,ZPBP
SE_02_073400024 chr7:50261827-50353094 91267 24 21 206312417383323 IKZF1
SE_02_073400321 chr7:50393348-50418145 24797 321 10 71521914110706 IKZF1,FIGNL1
SE_02_073400201 chr7:5217783-5240725 22942 201 5 9391575471121 WIPI2,SLC29A4
SE_02_073400284 chr7:5529855-5558974 29119 284 6 1100128196124 ACTB,FSCN1,FBXL18,LOC221946,MIR589
SE_02_073400017 chr7:55468348-55574823 106475 17 20 30559423811195 VOPP1
SE_02_073400226 chr7:7242546-7277327 34781 226 7 11154041586356 LOC101927354,C1GALT1
SE_02_073400122 chr7:909051-975556 66505 122 18 258121901511875 COX19,ADAP1,MIR339,GET4,CYP2W1
SE_02_073400257 chr8:115425445-115458590 33145 257 15 8132412610 TRPS1
SE_02_073400234 chr8:125599609-125613086 13477 234 4 391283310 TRIB1
SE_02_073400023 chr8:127910326-128002029 91703 23 28 27931958119694 PVT1,TMEM75,MIR1205,MIR1206,MIR1207
SE_02_073400353 chr8:27359203-27390282 31079 353 7 9079638740 PTK2B,MIR6842,TRIM35
SE_02_073400092 chr8:38934532-38967272 32740 92 10 922193252520 PLEKHA2,HTRA4,ADAM9,TM2D2
SE_02_073400210 chr8:6405173-6432507 27334 210 10 137930027432 MCPH1,LOC100287015
SE_02_073400310 chr8:80139328-80172093 32765 310 11 890289350231 TPD52
SE_02_073400381 chr8:8273697-8291097 17400 381 2 6915002300 FAM86B3P
SE_02_073400229 chr8:99223502-99245106 21604 229 5 503572800 VPS13B
SE_02_073400191 chr9:104746780-104780908 34128 191 7 8933208651056 NIPSNAP3B,NIPSNAP3A
SE_02_073400073 chr9:109394641-109423436 28795 73 8 82049172494 PTPN3
SE_02_073400043 chr9:111976544-112038667 62123 43 12 169417534537 MIR4668
SE_02_073400042 chr9:114363033-114398493 35460 42 7 98525501421328 AKNA,ORM2,ORM1
SE_02_073400356 chr9:114590820-114620067 29247 356 8 761299348466 C9ORF91,ATP6V1G1
SE_02_073400277 chr9:123163021-123178946 15925 277 4 34017036107 STRBP,MIR600HG
SE_02_073400165 chr9:123675507-123698998 23491 165 5 60638216636 DENND1A,MIR7150
SE_02_073400367 chr9:124196941-124220411 23470 367 11 805728650 NEK6
SE_02_073400205 chr9:131251898-131278106 26208 205 9 8015401691222 FAM78A,PPAPDC3
SE_02_073400022 chr9:131653376-131740049 86673 22 15 230848621132318 RAPGEF1
SE_02_073400026 chr9:133926687-133993568 66881 26 16 24839504150254 VAV2,LINC00094
SE_02_073400396 chr9:37321791-37343680 21889 396 9 54568128142 ZCCHC7,GRHPR
SE_02_073400400 chr9:40741135-40757587 16452 400 4 241740097 MIR1299
SE_02_073400289 chr9:42412853-42445821 32968 289 15 1186000 LOC103908605
SE_02_073400129 chr9:90770125-90843272 73147 129 20 211013182341246 SYK
SE_02_073400172 chr9:99105138-99140792 35654 172 17 862537144277 TGFBR1
SE_02_073400008 chr9:99162473-99267301 104828 8 18 27007405266725 SEC61B,ALG2
SE_02_073400113 chrX:115725903-115739050 13147 113 7 10000 PLS3
SE_02_073400166 chrX:115843288-115899265 55977 166 33 40787000 DANT2,PLS3
SE_02_073400401 chrX:119663618-119696080 32462 401 9 665160081443 SEPT6,MIR766
SE_02_073400376 chrX:12947035-12979371 32336 376 14 66812010283 TMSB4X,TLR8-AS1,TLR8

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM3208916
Input ID: Name:GSM3208917
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb