SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_066400420
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Prostate
Biosample name: LNCaP_DMSO
Genomic region: chr17:28741893-28750571
Size: 8678
Super-enhancer rank 420
Number of SE elements: 1
ChIP density(Case|Control): 13844.8812|872.139
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAF4;
ROSE Overlap TRAF4; NEK8;
ROSE Proximal SNORD4B; RAB34; TLCD1; PROCA1; SNORD42A; SNORD4A; SNORD42B; RPL23A;
ROSE Closest TRAF4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066400420 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers