SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_080900113
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D Serum
Genomic region: chr17:28740684-28751089
Size: 10405
Super-enhancer rank 113
Number of SE elements: 1
ChIP density(Case|Control): 63339.397|2392.1095
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAF4;
ROSE Overlap TRAF4; NEK8;
ROSE Proximal SNORD4B; RAB34; TLCD1; PROCA1; SNORD42A; SNORD4A; SNORD42B; RPL23A;
ROSE Closest TRAF4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_080900113 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers