SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_006400889
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryo
Biosample name: DN-Early_G1
Genomic region: chr17:28742971-28747710
Size: 4739
Super-enhancer rank 889
Number of SE elements: 2
ChIP density(Case|Control): 4071.7488|239.3195
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAF4;
ROSE Overlap TRAF4;
ROSE Proximal RAB34; SNORD42A; RPL23A; PROCA1; SNORD4A; SNORD4B; NEK8; TLCD1; SNORD42B;
ROSE Closest TRAF4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_006400889 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers