SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000253438
Gene: PCAT1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr8:126556323-127419050 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_139500017 chr8:126804804-126806031 Sample_02_1395 Colon COLO320-DM_DMSO 17 1 62 0 0 0 0 PCAT1
SE_02_068800002 chr8:126804847-126882614 Sample_02_0688 Lung NCI-H211_no infection 2 17 2202 29 9 163 0 PCAT1
SE_02_128400001 chr8:126804855-126882156 Sample_02_1284 Lung NCI-H211_p8-15 1 18 2178 29 9 163 0 PCAT1
SE_02_148000149 chr8:126807520-126834880 Sample_02_1480 Bone MHH-ES-1 149 6 674 4 7 51 0 PCAT1
SE_02_148500074 chr8:126807732-126834268 Sample_02_1485 Bone SK-ES-1 74 4 658 4 7 50 0 PCAT1
SE_02_148600058 chr8:126807813-126834444 Sample_02_1486 Bone SK-N-MC 58 8 659 4 7 51 0 PCAT1
SE_02_148200173 chr8:126808118-126848666 Sample_02_1482 Bone POE 173 10 1038 7 7 72 0 PCAT1
SE_02_148800027 chr8:126808234-126837897 Sample_02_1488 Bone TC-71 27 9 746 4 7 52 0 PCAT1
SE_02_106100027 chr8:126808234-126837911 Sample_02_1061 Bone TC71_WT 27 9 746 4 7 52 0 PCAT1
SE_02_106000022 chr8:126808436-126834517 Sample_02_1060 Bone TC71_SA2 KO 22 5 641 4 7 51 0 PCAT1
SE_02_147600002 chr8:126808473-126846731 Sample_02_1476 Bone EW-1 2 10 974 5 7 68 0 PCAT1
SE_02_155000054 chr8:126808518-126834456 Sample_02_1550 Bone EWS502 54 15 639 4 7 51 0 PCAT1
SE_02_070200012 chr8:126808682-126834461 Sample_02_0702 Bone David_TC71 12 15 636 4 7 51 0 PCAT1
SE_02_147800133 chr8:126808806-126849964 Sample_02_1478 Bone EW-3 133 9 1053 7 7 73 0 PCAT1
SE_02_148400031 chr8:126808826-126846553 Sample_02_1484 Bone Rh1 31 14 962 5 7 68 0 PCAT1,PRNCR1
SE_02_147500155 chr8:126808833-126847395 Sample_02_1475 Bone CHLA-25 155 10 984 6 7 72 0 PCAT1,PRNCR1
SE_02_148100281 chr8:126808967-126849510 Sample_02_1481 Bone MIC 281 14 1034 7 7 73 0 PCAT1
SE_02_105800473 chr8:126809006-126852176 Sample_02_1058 Bone A673_SA2 Rescue 473 10 1113 11 7 74 0 PCAT1
SE_02_105900437 chr8:126809011-126837827 Sample_02_1059 Bone A673_WT 437 9 717 4 7 52 0 PCAT1
SE_02_147300437 chr8:126809011-126837827 Sample_02_1473 Bone A-673 437 9 717 4 7 52 0 PCAT1
SE_02_147700207 chr8:126809029-126834418 Sample_02_1477 Bone EW-22 207 9 622 4 7 51 0 PCAT1
SE_02_148900212 chr8:126809098-126834854 Sample_02_1489 Bone TC-106 212 11 628 4 7 51 0 PCAT1,FAM84B
SE_02_128000816 chr8:126809099-126837984 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 816 9 723 4 7 52 0 PCAT1,PRNCR1
SE_02_147400132 chr8:126809205-126849576 Sample_02_1474 Bone CHLA-10 132 10 1035 7 7 73 0 PCAT1
SE_02_148300544 chr8:126809467-126834545 Sample_02_1483 Bone RD-ES 544 10 616 4 7 51 0 PCAT1,FAM84B
SE_02_143200657 chr8:126809571-126847027 Sample_02_1432 Bone A673 STAG2 WT 657 16 956 6 7 68 0 PCAT1
SE_02_070100087 chr8:126809590-126834511 Sample_02_0701 Bone David_TC32 87 12 614 4 7 51 0 PCAT1
SE_02_143300969 chr8:126809631-126851663 Sample_02_1433 Bone A673 STAG2 null 969 19 1085 10 7 74 0 PCAT1
SE_02_148700051 chr8:126809635-126834183 Sample_02_1487 Bone TC-32 51 10 606 4 7 50 0 PCAT1,PRNCR1
SE_02_128100001 chr8:126810202-126891334 Sample_02_1281 Lung NCI-H1048_p8-15 1 31 2282 30 11 181 0 PCAT1
SE_02_068500011 chr8:126819269-126891723 Sample_02_0685 Lung NCI-H1048_no infection 11 22 2104 27 11 181 0 PCAT1
SE_02_069700009 chr8:126819296-126891783 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 9 34 2107 27 11 181 0 PCAT1
SE_02_069800016 chr8:126819506-126891838 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 16 18 2103 27 11 182 0 PCAT1
SE_02_084000264 chr8:126819568-126849496 Sample_02_0840 Embryo hNPCs_R1159Q/+ 264 13 806 4 7 68 0 PCAT1,PRNCR1
SE_02_152100437 chr8:126819623-126852511 Sample_02_1521 Skin A375 DMSO 437 11 897 8 7 69 0 PCAT1
SE_02_137801073 chr8:126820731-126835955 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1073 16 415 1 7 47 0 PCAT1,PRNCR1
SE_02_048101984 chr8:126821179-126835120 Sample_02_0481 Mammary gland MDA-MB231 1984 7 375 1 7 46 0 PCAT1,PRNCR1
SE_02_071200768 chr8:126821416-126898162 Sample_02_0712 Pancreas BxPC3_sgNEG 768 20 2245 31 12 197 0 PCAT1
SE_02_045300249 chr8:126822557-126840883 Sample_02_0453 Neuroblastoma SJNB3 249 4 481 1 7 49 0 PCAT1,PRNCR1
SE_02_049101244 chr8:126823548-126846295 Sample_02_0491 Pharyng Detroit 562-Control 1244 9 599 1 7 62 0 PCAT1
SE_02_149300017 chr8:126823688-126879595 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 17 20 1595 24 9 148 0 PCAT1
SE_02_086200148 chr8:126823708-126852299 Sample_02_0862 Malignant rhaboid tumor TTC1240_SMARCB1 FL 148 8 774 7 7 68 0 PCAT1,PCAT2
SE_02_087600043 chr8:126823721-126885897 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 43 18 1804 25 9 170 0 PCAT1,PRNCR1
SE_02_108100102 chr8:126823725-126854627 Sample_02_1081 Muscle CTR shCtrl 102 24 836 10 9 86 0 PCAT1,FAM84B
SE_02_108000031 chr8:126823750-126854015 Sample_02_1080 Muscle JR1 shCtrl 31 22 818 10 9 86 0 PCAT1,FAM84B
SE_02_086300139 chr8:126823763-126846280 Sample_02_0863 Malignant rhaboid tumor TTC1240_empty 139 4 593 1 6 61 0 PCAT1,PRNCR1
SE_02_087700065 chr8:126823778-126874931 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 65 23 1444 23 8 118 0 PCAT1
SE_02_086500162 chr8:126823799-126846999 Sample_02_0865 Malignant rhaboid tumor TTC1240_SMARCB1_R377H 162 8 615 2 6 62 0 PCAT1,FAM84B
SE_02_086400157 chr8:126823858-126852171 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 157 5 762 7 6 68 0 PCAT1,PRNCR1
SE_02_086600142 chr8:126823898-126846281 Sample_02_0866 Malignant rhaboid tumor TTC1240_SMARCB1_delCC 142 5 586 1 5 61 0 PCAT1,FAM84B
SE_02_049201193 chr8:126823916-126846348 Sample_02_0492 Pharyng Detroit 562_LPS 1193 10 585 1 5 61 0 PCAT1
SE_02_155100093 chr8:126823963-126877400 Sample_02_1551 Gastrointestinal Stromal MaMel 93 19 1516 24 7 144 0 PCAT1
SE_02_049901249 chr8:126824020-126835604 Sample_02_0499 Fetal lung IMR90 IR Senescence 1249 7 292 0 5 46 0 PCAT1,PRNCR1
SE_02_151500557 chr8:126824059-126846769 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 557 7 598 1 5 62 0 PCAT1
SE_02_055700375 chr8:126824129-126836185 Sample_02_0557 iPSCs WT hiPSC#1 375 4 311 0 5 46 0 PCAT1,FAM84B
SE_02_044300238 chr8:126824141-126835350 Sample_02_0443 Bone MG63 238 7 282 0 5 45 0 PCAT1
SE_02_057201279 chr8:126824146-126841602 Sample_02_0572 Brain LN229_1_mM_glucose 1279 6 441 0 5 49 0 PCAT1
SE_02_153400429 chr8:126824150-126834837 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 429 5 268 0 5 44 0 PCAT1
SE_02_145200703 chr8:126824178-126835059 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 703 5 273 0 5 44 0 PCAT1,PRNCR1
SE_02_055600627 chr8:126824225-126835522 Sample_02_0556 iPSCs BOFS hiPSC cl1 627 4 284 0 5 45 0 PCAT1,PRNCR1
SE_02_076900233 chr8:126824272-126839977 Sample_02_0769 Ovary HEYA8 233 5 409 0 5 45 0 PCAT1
SE_02_143701154 chr8:126824283-126835616 Sample_02_1437 Liver LSEC-TNF 1154 4 287 0 5 45 0 PCAT1,PRNCR1
SE_02_113100380 chr8:126824357-126846710 Sample_02_1131 Pancreas T3M4 wt 380 12 590 1 5 61 0 PCAT1,PRNCR1
SE_02_135400806 chr8:126824414-126835272 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 806 2 277 0 5 45 0 PCAT1,PRNCR1
SE_02_093900358 chr8:126824533-126835349 Sample_02_0939 Mammary gland MDA-MB-231_control 358 5 275 0 5 45 0 PCAT1
SE_02_153700650 chr8:126824549-126834846 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 650 2 261 0 5 44 0 PCAT1
SE_01_011500633 chr8:126824599-126849541 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 633 7 664 3 5 66 0 PCAT1,PRNCR1
SE_02_153600738 chr8:126824651-126834597 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 738 4 252 0 5 44 0 PCAT1
SE_02_071301049 chr8:126824663-126846301 Sample_02_0713 Pancreas BxPC3_sgTP63 1049 12 567 1 5 60 0 PCAT1,PRNCR1
SE_02_072701069 chr8:126824667-126835158 Sample_02_0727 Fetal lung IMR90_Etoposide 1069 3 267 0 5 44 0 PCAT1,FAM84B
SE_02_141800231 chr8:126824669-126835777 Sample_02_1418 Brain SF9427 231 1 286 0 5 45 0 PCAT1,PRNCR1
SE_02_153500447 chr8:126824677-126834076 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 447 7 240 0 5 40 0 PCAT1
SE_02_065300324 chr8:126824681-126857700 Sample_02_0653 Tracheobronchial epithelial HTBE_H5N1_03h 324 6 883 12 7 88 0 PCAT1,PRNCR1
SE_02_143601409 chr8:126824686-126835412 Sample_02_1436 Liver LSEC-Ctrl 1409 2 272 0 5 45 0 PCAT1
SE_02_107300297 chr8:126824690-126879685 Sample_02_1073 Keratinocyte keratinocytes stem cell 297 12 1569 24 7 147 0 PCAT1
SE_02_070800413 chr8:126824696-126845904 Sample_02_0708 Pancreas hF3 organoid 413 8 552 1 5 58 0 PCAT1
SE_02_135200854 chr8:126824704-126834828 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 854 3 254 0 5 44 0 PCAT1,PRNCR1
SE_02_137601132 chr8:126824704-126834911 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1132 12 256 0 5 44 0 PCAT1,PRNCR1
SE_02_065200786 chr8:126824715-126898952 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 786 20 2154 30 10 198 0 PCAT1,PRNCR1
SE_02_048000274 chr8:126824719-126899045 Sample_02_0480 Gingival epithelial HGEP 274 21 2157 30 10 198 0 PCAT1
SE_02_099000651 chr8:126824722-126835415 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 651 6 271 0 5 45 0 PCAT1,PRNCR1
SE_02_137500986 chr8:126824723-126834719 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 986 11 252 0 5 44 0 PCAT1,FAM84B
SE_02_074101002 chr8:126824725-126834916 Sample_02_0741 Muscle RH30 1002 4 256 0 5 44 0 PCAT1,PRNCR1
SE_02_064801090 chr8:126824725-126858625 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1090 12 904 12 7 88 0 PCAT1,PRNCR1
SE_02_143801464 chr8:126824730-126835602 Sample_02_1438 Liver LSEC 1464 2 274 0 5 45 0 PCAT1,PRNCR1
SE_02_112100898 chr8:126824731-126846254 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 898 8 564 1 5 60 0 PCAT1,PRNCR1
SE_02_070700627 chr8:126824741-126846660 Sample_02_0707 Pancreas BxPC3 WT 627 10 580 1 5 61 0 PCAT1
SE_02_127200728 chr8:126824776-126834507 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 728 7 246 0 5 44 0 PCAT1
SE_02_112000644 chr8:126824817-126845858 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 644 6 547 1 5 58 0 PCAT1,PCAT2
SE_02_045300828 chr8:126867367-126878690 Sample_02_0453 Neuroblastoma SJNB3 828 3 396 4 0 42 0 PCAT1,PRNCR1
SE_02_148000148 chr8:126867437-126918854 Sample_02_1480 Bone MHH-ES-1 148 16 1560 34 13 161 0 PCAT1
SE_02_105800102 chr8:126867924-126938337 Sample_02_1058 Bone A673_SA2 Rescue 102 24 2192 54 17 191 0 PCAT1
SE_02_106100690 chr8:126868458-126886819 Sample_02_1061 Bone TC71_WT 690 6 617 4 0 74 0 PCAT1
SE_02_148800691 chr8:126868458-126886819 Sample_02_1488 Bone TC-71 691 6 617 4 0 74 0 PCAT1
SE_02_143200331 chr8:126868879-126936604 Sample_02_1432 Bone A673 STAG2 WT 331 27 2098 49 17 181 0 PCAT1
SE_02_147600024 chr8:126868959-126918542 Sample_02_1476 Bone EW-1 24 11 1488 32 11 158 0 PCAT1
SE_02_128000471 chr8:126868976-126918579 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 471 12 1485 32 11 158 0 PCAT1,PRNCR1
SE_02_105900101 chr8:126869072-126935487 Sample_02_1059 Bone A673_WT 101 14 2047 47 17 178 0 PCAT1
SE_02_147300101 chr8:126869072-126935487 Sample_02_1473 Bone A-673 101 14 2047 47 17 178 0 PCAT1
SE_02_106000726 chr8:126874175-126886252 Sample_02_1060 Bone TC71_SA2 KO 726 5 390 2 0 54 0 PCAT1
SE_02_142000102 chr8:126874499-126882682 Sample_02_1420 Brain DIPG007 102 3 270 2 0 40 0 PCAT1
SE_02_044300009 chr8:126876443-126964836 Sample_02_0443 Bone MG63 9 27 2671 89 19 217 0 PCAT1
SE_02_094900548 chr8:126876445-126951658 Sample_02_0949 Umbilical artery HUAEC_WT 548 18 2295 67 17 192 0 PCAT1
SE_02_044200197 chr8:126878464-126937776 Sample_02_0442 Bone MG63.3 197 20 1810 50 17 148 0 PCAT1
SE_02_147500173 chr8:126894992-126917843 Sample_02_1475 Bone CHLA-25 173 7 635 27 8 77 0 PCAT1,PRNCR1
SE_02_143300601 chr8:126899011-126926574 Sample_02_1433 Bone A673 STAG2 null 601 14 817 29 13 65 0 PCAT1
SE_02_139500016 chr8:126902352-126910927 Sample_02_1395 Colon COLO320-DM_DMSO 16 4 217 4 2 26 0 PCAT1
SE_02_106000115 chr8:126904236-126918490 Sample_02_1060 Bone TC71_SA2 KO 115 5 390 24 7 47 0 PCAT1
SE_02_106100365 chr8:126906252-126918516 Sample_02_1061 Bone TC71_WT 365 3 348 23 6 46 0 PCAT1
SE_02_148800364 chr8:126906252-126918516 Sample_02_1488 Bone TC-71 364 3 348 23 6 46 0 PCAT1
SE_02_147400536 chr8:126906379-126918579 Sample_02_1474 Bone CHLA-10 536 4 346 23 6 46 0 PCAT1
SE_02_070200073 chr8:126907332-126918515 Sample_02_0702 Bone David_TC71 73 6 321 23 6 46 0 PCAT1
SE_02_055600602 chr8:126908823-126918327 Sample_02_0556 iPSCs BOFS hiPSC cl1 602 3 280 22 5 46 0 PCAT1,PRNCR1
SE_02_102100394 chr8:126922140-126952002 Sample_02_1021 Mammary gland SUM159R 394 6 970 37 3 49 0 PCAT1
SE_02_102200016 chr8:126924446-126936422 Sample_02_1022 Mammary gland SUM159_WT 16 3 401 13 2 23 0 PCAT1
SE_02_102300013 chr8:126925025-126952653 Sample_02_1023 Mammary gland SUM159_BRD7_KO 13 8 882 34 2 52 0 PCAT1
SE_02_102000106 chr8:126925619-126935196 Sample_02_1020 Mammary gland SUM159 106 3 315 11 2 20 0 PCAT1
SE_02_081500169 chr8:126925659-126935208 Sample_02_0815 Mammary gland SUM159PT 169 3 317 11 2 20 0 PCAT1
SE_02_078800018 chr8:126931555-126947915 Sample_02_0788 Brain 3565 18 5 516 21 0 40 0 PCAT1
SE_02_142000103 chr8:126932658-126937062 Sample_02_1420 Brain DIPG007 103 1 144 6 0 18 0 PCAT1
SE_02_105801220 chr8:126951646-126998807 Sample_02_1058 Bone A673_SA2 Rescue 1220 14 1555 143 4 77 0 PCAT1
SE_02_078800005 chr8:126960586-127000578 Sample_02_0788 Brain 3565 5 12 1375 126 4 68 0 PCAT1
SE_02_080200098 chr8:126963206-127011010 Sample_02_0802 Brain 3094 98 11 1588 133 3 73 0 PCAT1
SE_02_128100119 chr8:126963803-126988092 Sample_02_1281 Lung NCI-H1048_p8-15 119 9 855 97 1 33 0 PCAT1
SE_02_106100766 chr8:126964034-126991981 Sample_02_1061 Bone TC71_WT 766 7 1002 114 2 38 0 PCAT1
SE_02_130700023 chr8:126964308-126979091 Sample_02_1307 Brain Glioblastoma patient derived cancer stem cell 23 9 505 67 1 33 0 PCAT1
SE_02_142000012 chr8:126964861-126998991 Sample_02_1420 Brain DIPG007 12 9 1181 121 2 56 0 PCAT1
SE_02_102300084 chr8:126966166-127001157 Sample_02_1023 Mammary gland SUM159_BRD7_KO 84 7 1215 121 3 63 0 PCAT1
SE_02_139500044 chr8:126977479-126979254 Sample_02_1395 Colon COLO320-DM_DMSO 44 1 54 5 0 11 0 PCAT1
SE_02_130800689 chr8:126990138-127009902 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 689 4 607 23 1 36 0 PCAT1
SE_02_128400080 chr8:127002109-127019326 Sample_02_1284 Lung NCI-H211_p8-15 80 6 531 27 4 40 128 PCAT1
SE_02_068800080 chr8:127002168-127019346 Sample_02_0688 Lung NCI-H211_no infection 80 7 531 27 4 40 128 PCAT1
SE_02_069700282 chr8:127003738-127019091 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 282 8 473 25 4 39 128 PCAT1
SE_02_068500331 chr8:127005367-127019018 Sample_02_0685 Lung NCI-H1048_no infection 331 6 426 24 4 37 128 PCAT1
SE_02_128100031 chr8:127005702-127019278 Sample_02_1281 Lung NCI-H1048_p8-15 31 8 423 24 4 39 128 PCAT1
SE_02_076400328 chr8:127009989-127025187 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 328 1 476 19 4 36 288 PCAT1
SE_02_140800124 chr8:127010064-127025080 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 124 1 471 19 4 36 288 PCAT1
SE_02_140900252 chr8:127010134-127025036 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 252 1 470 19 4 36 288 PCAT1
SE_02_066400059 chr8:127010161-127065625 Sample_02_0664 Prostate LNCaP_DMSO 59 12 1651 25 14 153 288 PCAT1,PCAT2,PRNCR1
SE_02_140700113 chr8:127010298-127065299 Sample_02_1407 Prostate LNCaP_R1881 4h 113 15 1635 25 14 153 288 PCAT1,PCAT2,PRNCR1
SE_02_067300065 chr8:127010375-127025037 Sample_02_0673 Prostate LNCAP_FA 65 3 465 19 4 36 288 PCAT1
SE_02_051100033 chr8:127010409-127066024 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 33 13 1658 25 14 153 288 PCAT1,PCAT2,PRNCR1
SE_02_051000235 chr8:127010996-127024536 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 235 6 435 18 4 33 288 PCAT1
SE_02_050900103 chr8:127011005-127024715 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 103 6 440 18 4 33 288 PCAT1
SE_02_140600224 chr8:127014899-127025051 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 224 1 331 3 2 15 160 PCAT1
SE_02_139500074 chr8:127018325-127019484 Sample_02_1395 Colon COLO320-DM_DMSO 74 1 41 0 0 7 0 PCAT1
SE_02_102100033 chr8:127028950-127057050 Sample_02_1021 Mammary gland SUM159R 33 10 803 3 8 101 0 PCAT2,PCAT1,PRNCR1
SE_02_066100526 chr8:127029489-127056897 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 526 9 782 3 8 101 0 PCAT2,PCAT1,PRNCR1
SE_02_070800279 chr8:127033846-127039396 Sample_02_0708 Pancreas hF3 organoid 279 6 160 1 3 35 0 PCAT2,PCAT1,PRNCR1
SE_02_102300023 chr8:127034166-127057350 Sample_02_1023 Mammary gland SUM159_BRD7_KO 23 7 688 3 8 101 0 PCAT2,PCAT1,PRNCR1
SE_02_102200013 chr8:127034453-127057418 Sample_02_1022 Mammary gland SUM159_WT 13 7 677 3 8 101 0 PCAT2,PCAT1,PRNCR1
SE_02_094500407 chr8:127034611-127042577 Sample_02_0945 Brain SF767 407 6 247 1 6 51 0 PCAT2,PCAT1,PRNCR1
SE_02_128100190 chr8:127034721-127054498 Sample_02_1281 Lung NCI-H1048_p8-15 190 9 602 3 7 99 0 PCAT2,PCAT1,PRNCR1
SE_02_074800326 chr8:127034848-127055263 Sample_02_0748 Mammary gland HCC1599_WO 326 3 622 3 8 99 0 PCAT2,PCAT1,PRNCR1
SE_02_068500751 chr8:127034997-127053965 Sample_02_0685 Lung NCI-H1048_no infection 751 6 584 3 7 92 0 PCAT2,PCAT1,PRNCR1
SE_02_074900860 chr8:127035028-127054888 Sample_02_0749 Mammary gland HCC1599_GSI 860 4 610 3 7 99 0 PCAT2,PCAT1,PRNCR1
Genomic distribution of SEs associated with PCAT1
Genome Browser

The strength of the tissue affected by the gene

Expression of PCAT1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)