Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_086300178 chr1:108797032-108835047 38015 178 18 1021 144 4 53 755 AKNAD1,STXBP3,SPATA42,GPSM2
SE_02_086300196 chr1:150559906-150580866 20960 196 1 555 54 4 87 955 ADAMTSL4,MCL1,ADAMTSL4-AS1,ENSA,FALEC,MIR4257
SE_02_086300286 chr1:150595843-150625200 29357 286 14 691 67 2 38 409 ENSA,ADAMTSL4-AS1,MIR4257,MCL1,ADAMTSL4
SE_02_086300366 chr1:15833059-15851416 18357 366 2 517 58 4 84 732 FLJ37453,SPEN,UQCRHL
SE_02_086300223 chr1:163359923-163385902 25979 223 10 779 31 4 118 0 NUF2,RGS5,LOC100422212
SE_02_086300077 chr1:163404385-163477880 73495 77 17 2091 3 6 376 34 LOC100422212
SE_02_086300067 chr1:164913857-165016214 102357 67 25 2899 17 10 345 0 LOC100505795
SE_02_086300145 chr1:165042068-165075912 33844 145 8 1027 6 5 151 0 LOC100505795
SE_02_086300269 chr1:172137100-172148701 11601 269 1 252 9 1 99 588 MIR214,DNM3OS,DNM3,MIR199A2,MIR3120
SE_02_086300251 chr1:172175029-172189504 14475 251 1 330 26 0 56 52 DNM3,MIR199A2,MIR3120,MIR214,DNM3OS
SE_02_086300009 chr1:172238530-172444742 206212 9 45 5022 302 25 828 1328 DNM3,C1ORF105,PIGC
SE_02_086300319 chr1:21303029-21339710 36681 319 17 1088 99 3 73 0 ECE1,LOC100506801
SE_02_086300357 chr1:223697982-223716140 18158 357 6 467 69 0 47 327 CAPN2,CAPN8
SE_02_086300246 chr1:233074662-233125792 51130 246 21 1275 82 0 32 158 PCNXL2,NTPCR
SE_02_086300280 chr1:234598984-234623074 24090 280 6 639 43 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_086300070 chr1:234952272-235051614 99342 70 26 3025 89 7 268 308 LOC101927851,LINC01348
SE_02_086300279 chr1:235073278-235107756 34478 279 15 741 74 2 11 0 SNORA14B,LINC01348,TOMM20
SE_02_086300340 chr1:31924966-31964690 39724 340 16 1062 39 2 0 226 PTP4A2,KHDRBS1
SE_02_086300006 chr1:55277449-55446726 169277 6 34 4965 88 33 237 80 MIR4422
SE_02_086300245 chr1:58515588-58546727 31139 245 4 891 192 2 68 303 OMA1,TACSTD2
SE_02_086300085 chr1:66166950-66253281 86331 85 16 2503 25 9 240 65 PDE4B
SE_02_086300346 chr1:74468128-74490390 22262 346 11 596 20 0 113 34 TNNI3K,FPGT-TNNI3K,ERICH3-AS1
SE_02_086300125 chr1:74503338-74540961 37623 125 6 1123 59 12 104 31 TNNI3K,FPGT-TNNI3K,ERICH3-AS1
SE_02_086300131 chr1:74561934-74624516 62582 131 12 1699 27 2 125 1298 ERICH3-AS1,ERICH3
SE_02_086300258 chr1:74638011-74657136 19125 258 4 526 11 1 79 146 ERICH3,ERICH3-AS1
SE_02_086300229 chr1:74670305-74698735 28430 229 8 754 85 6 82 151 ERICH3,CRYZ,TYW3
SE_02_086300327 chr1:89818839-89863884 45045 327 12 1189 53 1 153 460 LRRC8D
SE_02_086300221 chr1:89881530-89953259 71729 221 25 1766 40 2 206 313 LRRC8D,ZNF326,GEMIN8P4
SE_02_086300074 chr10:113981780-114052676 70896 74 18 2129 134 10 357 556 ADRB1
SE_02_086300117 chr10:121733317-121751730 18413 117 3 538 24 1 46 87 ATE1,FGFR2
SE_02_086300019 chr10:121765153-121826002 60849 19 8 1615 99 2 131 46 ATE1
SE_02_086300301 chr10:121882974-121929027 46053 301 21 1373 189 5 64 599 ATE1,ATE1-AS1,NSMCE4A
SE_02_086300291 chr10:12346819-12375965 29146 291 7 930 31 2 108 190 CAMK1D
SE_02_086300250 chr10:12507909-12518555 10646 250 1 343 33 4 12 0 CAMK1D,MIR4480
SE_02_086300059 chr10:12582562-12623187 40625 59 1 1251 14 5 36 0 CAMK1D,MIR4480,MIR4481
SE_02_086300088 chr10:12624513-12652643 28130 88 1 937 30 3 37 0 CAMK1D,MIR4480,MIR4481
SE_02_086300110 chr10:12676934-12693951 17017 110 1 519 14 0 31 0 CAMK1D,MIR4481,MIR548Q
SE_02_086300130 chr10:12694588-12714709 20121 130 1 630 12 4 21 0 CAMK1D,MIR4481,MIR548Q
SE_02_086300042 chr10:22986624-23097618 110994 42 23 3050 149 8 196 599 ARMC3,MSRB2
SE_02_086300170 chr10:30374599-30393920 19321 170 1 596 0 1 0 10 MAP3K8,MIR7162,MTPAP,GOLGA2P6
SE_02_086300263 chr10:30413761-30466617 52856 263 15 1486 78 4 160 745 MAP3K8,MIR7162,GOLGA2P6
SE_02_086300028 chr10:30531269-30595728 64459 28 8 2192 97 10 25 0 LYZL2
SE_02_086300037 chr10:30685058-30789299 104241 37 24 3584 115 7 207 669 SVILP1
SE_02_086300179 chr10:30820552-30845264 24712 179 4 774 77 5 60 79 ZNF438,SVILP1
SE_02_086300176 chr10:63504429-63633862 129433 176 33 2941 325 33 303 727 REEP3,JMJD1C-AS1,JMJD1C
SE_02_086300349 chr10:63696970-63723695 26725 349 5 660 31 1 127 0 REEP3
SE_02_086300343 chr10:72294280-72340551 46271 343 24 1290 89 0 118 889 DNAJB12,DDIT4
SE_02_086300001 chr10:7249125-7597463 348338 1 116 11034 509 21 498 1937 ITIH5,SFMBT2
SE_02_086300256 chr10:93428712-93482667 53955 256 26 1571 210 7 135 294 MYOF,CEP55
SE_02_086300191 chr10:97529856-97566788 36932 191 10 1056 88 2 87 0 UBTD1,ANKRD2,MMS19,HOGA1,C10ORF62
SE_02_086300102 chr10:98309153-98385471 76318 102 10 2346 227 14 247 207 PYROXD2,MIR4685,LOXL4,MIR1287
SE_02_086300157 chr10:98455043-98475969 20926 157 1 597 113 1 109 466 HPSE2,MIR4685,PYROXD2,HPS1
SE_02_086300234 chr10:98476352-98492411 16059 234 1 437 22 2 95 140 HPSE2,MIR4685,HPS1
SE_02_086300305 chr10:98510309-98534174 23865 305 6 673 62 2 73 0 HPSE2,HPS1
SE_02_086300032 chr10:98548014-98691200 143186 32 32 3682 330 21 373 156 HPSE2,HPS1
SE_02_086300063 chr10:99963658-100048108 84450 63 28 2204 288 6 84 335 CPN1,DNMBP,DNMBP-AS1
SE_02_086300259 chr11:118592299-118623764 31465 259 16 799 41 4 281 1112 ARCN1,PHLDB1,IFT46,MIR6716
SE_02_086300272 chr11:118907191-118930715 23524 272 9 562 41 3 428 659 BCL9L,MIR4492,CXCR5,UPK2,FOXR1
SE_02_086300161 chr11:12043722-12090607 46885 161 11 1543 140 11 110 0 DKK3,MICAL2
SE_02_086300038 chr11:121633102-121777761 144659 38 49 3850 128 12 527 63 SORL1
SE_02_086300351 chr11:121797554-121810995 13441 351 6 340 1 0 63 0 MIR125B1
SE_02_086300326 chr11:61963268-61981271 18003 326 4 438 39 10 88 797 FTH1,BEST1,RAB3IL1
SE_02_086300254 chr11:65415698-65431418 15720 254 1 444 18 2 42 1152 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_086300222 chr11:65487808-65497502 9694 222 1 256 23 3 5 0 SCYL1,MIR612,MALAT1
SE_02_086300336 chr11:75547771-75565291 17520 336 6 496 59 3 64 487 SERPINH1,GDPD5
SE_02_086300238 chr12:108663780-108698570 34790 238 11 814 59 6 67 40 CORO1C,MIR4496,SELPLG
SE_02_086300128 chr12:108798216-108858268 60052 128 27 1682 68 3 120 1130 SSH1,MIR619,DAO
SE_02_086300217 chr12:124909000-124941491 32491 217 8 1183 41 4 71 1108 MIR5188,UBC,SCARB1,DHX37
SE_02_086300342 chr12:12714094-12727198 13104 342 3 362 25 2 173 598 CDKN1B,APOLD1,MIR613,GPR19
SE_02_086300328 chr12:13097085-13104892 7807 328 1 186 6 1 51 88 GSG1
SE_02_086300121 chr12:13152107-13218769 66662 121 16 1780 110 10 209 508 EMP1,GSG1
SE_02_086300188 chr12:14995536-15039000 43464 188 11 1214 127 6 32 0 LINC01489,ARHGDIB,PDE6H
SE_02_086300024 chr12:15129100-15228314 99214 24 10 2366 150 12 239 182 RERG,RERG-AS1
SE_02_086300093 chr12:27772713-27873283 100570 93 24 2694 215 14 273 908 KLHL42,MANSC4
SE_02_086300356 chr12:27896668-27922504 25836 356 10 637 14 4 27 0 PTHLH
SE_02_086300224 chr12:27939058-27971987 32929 224 9 867 12 6 145 507 PTHLH
SE_02_086300242 chr12:44000651-44030267 29616 242 4 800 64 2 29 0 TMEM117
SE_02_086300091 chr12:44055954-44081523 25569 91 2 597 26 1 43 0 TMEM117
SE_02_086300293 chr12:44125811-44159594 33783 293 9 844 20 3 113 40 TMEM117
SE_02_086300049 chr12:53538351-53627329 88978 49 28 1945 207 6 358 377 ATF7,TARBP2,ATP5G2,NPFF,MAP3K12,LOC100652999
SE_02_086300363 chr12:53658646-53680391 21745 363 5 551 60 2 126 546 ATP5G2,ATF7,CALCOCO1
SE_02_086300304 chr12:53989372-54006101 16729 304 1 436 21 0 398 703 MIR196A2,HOXC-AS2,HOXC10,HOXC9,HOXC-AS1,HOXC12,HOTAIR,HOXC4,HOXC11,HOXC5,HOXC6,HOXC8,HOXC13-AS,MIR615,HOXC-AS3
SE_02_086300332 chr12:54007882-54022274 14392 332 1 293 7 0 334 690 HOXC4,HOXC8,HOXC5,HOXC6,HOTAIR,HOXC11,HOXC-AS2,HOXC9,HOXC-AS1,MIR196A2,FLJ12825,HOXC10,MIR615,HOXC-AS3
SE_02_086300079 chr12:54325067-54359142 34075 79 1 784 31 3 276 780 LOC102724050,MIR148B,COPZ1,CBX5,NFE2,GPR84,ZNF385A,HNRNPA1
SE_02_086300299 chr12:57064729-57102910 38181 299 15 960 65 5 285 2274 NAB2,NEMP1,STAT6,TAC3,LRP1,LRP1-AS,MYO1A
SE_02_086300315 chr12:57886523-57905450 18927 315 6 447 52 2 83 0 CTDSP2,LOC100506844,XRCC6BP1
SE_02_086300338 chr12:6323254-6344126 20872 338 10 620 47 12 110 1468 TNFRSF1A,PLEKHG6,LTBR,SCNN1A
SE_02_086300066 chr12:65277911-65344501 66590 66 13 1652 63 6 230 397 MSRB3
SE_02_086300013 chr12:65423826-65540121 116295 13 22 3123 137 14 172 445 LOC100507065,MSRB3
SE_02_086300046 chr12:65556617-65659667 103050 46 21 2668 119 5 362 103 LOC100507065
SE_02_086300368 chr12:65727795-65747033 19238 368 3 558 3 0 47 0 HMGA2
SE_02_086300239 chr12:65820476-65838658 18182 239 1 409 5 3 121 642 RPSAP52,HMGA2,LOC100129940
SE_02_086300294 chr12:65888630-65905861 17231 294 1 422 11 2 84 0 HMGA2,LOC100129940
SE_02_086300265 chr12:77719183-77750332 31149 265 11 870 0 1 43 0 NAV3
SE_02_086300034 chr12:77813997-77955150 141153 34 27 3892 163 21 271 120 NAV3
SE_02_086300076 chr12:7798763-7878942 80179 76 17 2442 241 8 66 1212 SLC2A14,CLEC4C,NANOG,NANOGNB
SE_02_086300173 chr12:7904135-7938772 34637 173 10 1068 74 5 58 916 SLC2A3,SLC2A14
SE_02_086300152 chr12:7954052-7998054 44002 152 17 1338 105 3 27 0 SLC2A3,FOXJ2
SE_02_086300322 chr12:90974634-90984552 9918 322 4 248 8 0 17 61 EPYC,CCER1
SE_02_086300153 chr12:91094450-91115471 21021 153 4 624 49 2 41 234 LUM,KERA
SE_02_086300033 chr12:91132558-91210849 78291 33 27 1993 57 6 151 435 DCN,LUM
SE_02_086300051 chr12:91245148-91291111 45963 51 11 1087 64 8 43 0 DCN
SE_02_086300105 chr12:91306388-91335391 29003 105 4 715 52 0 63 0 DCN
SE_02_086300108 chr12:91351618-91417002 65384 108 13 1618 55 1 127 0 DCN
SE_02_086300142 chr12:98350943-98425398 74455 142 27 1946 81 6 326 38 SLC9A7P1,LOC643770
SE_02_086300177 chr13:100380681-100399530 18849 177 5 514 10 0 89 0 PCCA,PCCA-AS1
SE_02_086300309 chr13:100413786-100445320 31534 309 7 804 29 0 101 50 PCCA,PCCA-AS1
SE_02_086300226 chr13:100458777-100518237 59460 226 10 1666 132 4 266 284 PCCA-AS1,PCCA,GGACT
SE_02_086300359 chr13:114062416-114072321 9905 359 4 343 32 0 3 0 RASA3
SE_02_086300352 chr13:22446268-22465883 19615 352 4 559 1 2 28 0 LINC00540,FGF9
SE_02_086300333 chr13:22483931-22508657 24726 333 6 695 4 0 119 0 LINC00540,FGF9
SE_02_086300230 chr13:22625237-22672164 46927 230 13 1439 12 5 85 0 BASP1P1,SACS
SE_02_086300080 chr13:26923174-26988191 65017 80 12 2029 28 13 98 0 USP12-AS1
SE_02_086300267 chr13:35714191-35734295 20104 267 8 608 3 2 88 0 LINC00445
SE_02_086300008 chr13:35757184-35859573 102389 8 10 2819 39 6 573 1535 DCLK1
SE_02_086300015 chr13:35876021-35964012 87991 15 13 2511 73 21 184 98 DCLK1
SE_02_086300288 chr13:99965564-99989192 23628 288 3 556 5 3 478 1412 ZIC2,ZIC5,LOC101927437,LINC00554
SE_02_086300271 chr14:101706817-101738260 31443 271 9 881 58 0 9 303 LINC00239,PPP2R5C
SE_02_086300275 chr14:101759796-101813058 53262 275 17 1342 95 2 87 503 PPP2R5C,LINC00239
SE_02_086300016 chr14:22263412-22349783 86371 16 16 2792 161 28 120 621 DAD1
SE_02_086300090 chr14:22368188-22395665 27477 90 3 775 17 21 116 226 DAD1
SE_02_086300039 chr14:22465974-22587060 121086 39 35 3675 456 27 544 3628 DAD1,ABHD4
SE_02_086300281 chr14:55429906-55455521 25615 281 8 765 133 23 18 285 TBPL2,ATG14
SE_02_086300350 chr14:58636833-58651994 15161 350 1 392 14 1 141 944 DACT1
SE_02_086300109 chr14:58763713-58817423 53710 109 19 1594 117 17 228 41 LINC01500
SE_02_086300208 chr14:58860019-58884763 24744 208 7 682 57 16 87 0 LINC01500
SE_02_086300099 chr14:58939726-58982727 43001 99 5 1247 49 8 126 0 LINC01500
SE_02_086300273 chr14:67906096-67946114 40018 273 20 917 25 1 88 0 RAD51B
SE_02_086300010 chr14:68074736-68288423 213687 10 67 5182 196 67 968 82 RAD51B
SE_02_086300220 chr14:77021935-77053247 31312 220 9 855 58 10 479 1041 IRF2BPL,LOC283575,CIPC,LOC102724190
SE_02_086300116 chr15:35287419-35333583 46164 116 14 1080 26 1 322 0 MIR3942
SE_02_086300225 chr15:35687443-35708572 21129 225 3 502 10 2 222 0 DPH6-AS1,DPH6
SE_02_086300199 chr15:35748198-35788045 39847 199 14 923 8 2 277 0 DPH6-AS1,MIR4510,DPH6
SE_02_086300050 chr15:36347483-36434764 87281 50 15 2546 7 10 588 0 C15ORF41
SE_02_086300283 chr15:36491519-36504210 12691 283 1 329 4 1 175 0 C15ORF41
SE_02_086300303 chr15:36575381-36604283 28902 303 10 774 87 4 230 178 C15ORF41
SE_02_086300031 chr15:55626635-55744654 118019 31 37 3184 265 20 237 896 PRTG,PYGO1
SE_02_086300146 chr15:60354439-60398894 44455 146 16 1237 77 7 174 657 ANXA2
SE_02_086300073 chr15:60507531-60634341 126810 73 44 3219 142 12 744 898 RORA-AS1,RORA,RORA-AS2,ICE2
SE_02_086300317 chr15:65033312-65055117 21805 317 11 568 34 2 49 707 RASL12,SLC51B,SPG21,MTFMT,KBTBD13
SE_02_086300061 chr15:65577135-65666712 89577 61 27 2048 188 10 296 2900 SLC24A1,HACD3,DENND4A,VWA9,RNU6-19P
SE_02_086300206 chr15:65754262-65804797 50535 206 26 1197 128 11 177 252 DENND4A,MIR4511
SE_02_086300243 chr15:65823620-65841849 18229 243 6 458 35 0 41 0 DENND4A,RAB11A
SE_02_086300107 chr15:66903943-66947200 43257 107 12 1244 28 7 199 0 SMAD3
SE_02_086300184 chr15:92797391-92833515 36124 184 15 1118 33 0 47 0 LINC01578,ASB9P1
SE_02_086300137 chr15:94324104-94376769 52665 137 10 1744 99 12 237 542 MCTP2
SE_02_086300344 chr15:95016782-95039048 22266 344 4 621 0 0 113 0 LOC440311
SE_02_086300219 chr15:95109718-95140007 30289 219 6 794 43 1 42 0 LINC01197
SE_02_086300119 chr15:95157753-95199484 41731 119 10 1192 63 3 114 0 LINC01197
SE_02_086300041 chr15:95237274-95332001 94727 41 14 2915 113 8 558 298 LINC01197
SE_02_086300282 chr15:96330681-96350756 20075 282 1 463 1 0 557 1143 NR2F2,MIR1469,NR2F2-AS1
SE_02_086300360 chr15_KI270849v1_alt:34099-61880 27781 360 11 0 0 0 0 0 TRIM69,LOC100419583,B2M
SE_02_086300084 chr16:15432991-15573154 140163 84 45 3819 293 32 43 362 C16ORF45,MPV17L,MIR6506
SE_02_086300056 chr16:27210346-27251124 40778 56 1 1158 99 7 67 1610 NSMCE1,KDM8,FLJ21408
SE_02_086300240 chr16:27263359-27278040 14681 240 1 344 30 4 18 505 FLJ21408,NSMCE1,IL4R
SE_02_086300138 chr16:27309563-27332094 22531 138 1 593 44 2 9 231 IL4R,FLJ21408,NSMCE1
SE_02_086300197 chr16:29249022-29324484 75462 197 16 2735 304 2 0 506 SNX29P2
SE_02_086300140 chr16:64432182-64484204 52022 140 16 1429 171 3 128 0 CDH11
SE_02_086300205 chr16:72104594-72155124 50530 205 14 1349 170 21 159 2443 PMFBP1,DHX38,HP,TXNL4B,HPR
SE_02_086300007 chr16:72179482-72319810 140328 7 28 3707 346 13 679 0 LINC01572,PMFBP1
SE_02_086300182 chr16:73016328-73061278 44950 182 12 1275 34 6 504 430 ZFHX3,HCCAT5
SE_02_086300310 chr16:73599189-73630590 31401 310 7 920 1 3 194 0 LINC01568
SE_02_086300300 chr16:73659509-73674250 14741 300 1 425 2 9 93 0 LINC01568
SE_02_086300094 chr16:73850380-73896615 46235 94 4 1389 8 4 414 0 LOC101928035
SE_02_086300198 chr16:73944511-73973826 29315 198 8 886 5 1 0 0 LOC101928035
SE_02_086300247 chr16:74021705-74039140 17435 247 3 564 3 1 0 0 LOC101928035
SE_02_086300168 chr16:74060493-74109501 49008 168 15 1582 30 3 0 0 LOC101928035
SE_02_086300081 chr16_KI270853v1_alt:1085821-1223279 137458 81 40 0 0 0 0 0 C16ORF45
SE_02_086300068 chr17:13334820-13367746 32926 68 6 963 22 3 78 0 MIR548H3
SE_02_086300244 chr17:13424455-13438960 14505 244 5 430 3 0 90 0 MIR548H3
SE_02_086300002 chr17:13452732-13602813 150081 2 12 4680 113 9 484 677 HS3ST3A1,MIR548H3
SE_02_086300101 chr17:14296435-14355054 58619 101 14 1708 54 7 296 866 MGC12916,HS3ST3B1
SE_02_086300209 chr17:15046478-15069501 23023 209 5 719 23 1 46 0 CDRT7,CDRT8
SE_02_086300083 chr17:15108870-15178984 70114 83 8 2160 78 9 138 0 CDRT8
SE_02_086300284 chr17:2052363-2124766 72403 284 27 2043 195 8 780 2726 HIC1,SMG6,DPH1,RTN4RL1,MIR132,MIR212,OVCA2
SE_02_086300045 chr17:2137561-2247666 110105 45 37 2938 286 14 803 497 LOC101927839,SMG6
SE_02_086300311 chr17:40613981-40620142 6161 311 1 177 19 2 0 0 CCR7,KRT222,SMARCE1
SE_02_086300167 chr17:40620234-40635042 14808 167 1 380 36 0 20 305 SMARCE1,KRT222
SE_02_086300143 chr17:40637939-40653500 15561 143 1 338 24 2 123 309 SMARCE1,KRT222
SE_02_086300058 chr17:40659850-40707094 47244 58 1 1330 98 2 112 603 KRT24,KRT222,KRT25,SMARCE1
SE_02_086300260 chr17:40772469-40780882 8413 260 1 231 19 0 37 243 KRT27,TMEM99,KRT10,KRT25,KRT28,KRT26
SE_02_086300150 chr17:40784615-40798493 13878 150 1 367 44 1 29 308 KRT28,TMEM99,KRT10,KRT25,KRT27,KRT26
SE_02_086300335 chr17:40900359-40913189 12830 335 1 366 42 1 29 0 KRT12,KRT20,KRT23
SE_02_086300312 chr17:40945641-40961450 15809 312 1 460 64 1 83 171 KRT39,KRTAP3-3,KRTAP3-1,KRT23,KRTAP3-2,KRT40
SE_02_086300323 chr17:41173660-41185761 12101 323 1 387 89 0 45 301 KRTAP4-1,KRTAP4-2,KRTAP9-7,KRTAP9-3,KRTAP4-6,KRTAP4-5,KRTAP9-2,KRTAP4-4,KRTAP4-12,KRTAP4-3,KRTAP9-1
SE_02_086300020 chr17:59746227-59860421 114194 20 39 2508 241 8 278 529 TUBD1,MIR21,VMP1,PTRH2,RPS6KB1
SE_02_086300268 chr17:61000184-61017841 17657 268 3 366 6 1 80 47 BCAS3
SE_02_086300158 chr17:61141686-61169340 27654 158 6 650 17 2 266 45 BCAS3,TBX2-AS1
SE_02_086300053 chr17:61198684-61347575 148891 53 46 3739 68 21 823 76 BCAS3,TBX2-AS1
SE_02_086300321 chr17:74981471-75014124 32653 321 11 798 73 2 137 1298 CDR2L,ICT1,HID1-AS1,ATP5H,HID1,KCTD2,OTOP3
SE_02_086300144 chr17:78309537-78360126 50589 144 17 1582 18 2 279 755 SOCS3,LOC100996291,LOC101928674,PGS1
SE_02_086300297 chr17:7833512-7846348 12836 297 2 334 16 1 333 530 DNAH2,KDM6B,CYB5D1,CHD3,TMEM88,NAA38
SE_02_086300086 chr17_JH159146v1_alt:1482-111439 109957 86 33 0 0 0 0 0 KRT12,KRT23,KRT20,KRT39
SE_02_086300003 chr18:24527664-24706251 178587 3 41 5024 285 21 560 304 LOC729950
SE_02_086300233 chr18:24722393-24736092 13699 233 5 402 11 0 35 0 LOC729950
SE_02_086300236 chr18:25312927-25355962 43035 236 15 1150 3 2 369 287 ZNF521
SE_02_086300248 chr18:25724401-25745664 21263 248 3 654 1 1 87 0 SS18
SE_02_086300124 chr18:25856014-25900633 44619 124 12 1206 47 9 158 0 SS18
SE_02_086300298 chr18:3446108-3463387 17279 298 3 445 15 1 195 979 TGIF1,GAPLINC
SE_02_086300023 chr18:3585718-3671834 86116 23 11 2425 121 10 127 797 DLGAP1,DLGAP1-AS2,DLGAP1-AS1
SE_02_086300292 chr19:13120538-13167623 47085 292 10 1205 71 4 182 2674 NACC1,IER2,STX10,LYL1,TRMT1
SE_02_086300339 chr19:14246815-14260168 13353 339 4 396 8 0 16 0 ADGRL1
SE_02_086300364 chr19:1844783-1876725 31942 364 6 1008 79 2 80 1259 REXO1,KLF16,ATP8B3,LOC100288123,ADAT3,MIR1909,SCAMP4,ABHD17A
SE_02_086300215 chr19:44741732-44771318 29586 215 10 803 45 7 191 1215 MIR8085,BCL3,BCAM,CEACAM16,CBLC
SE_02_086300249 chr19:45408213-45455325 47112 249 15 1345 143 2 145 1435 ERCC1,MIR6088,CD3EAP,PPP1R13L,PPM1N,FOSB,ERCC2,RTN2
SE_02_086300306 chr19:46114158-46137090 22932 306 3 591 34 0 2 262 IGFL3,IGFL2,LOC400706
SE_02_086300308 chr19:47093640-47141295 47655 308 6 1340 38 1 184 647 SAE1,ZC3H4,TMEM160
SE_02_086300302 chr19:48308788-48334919 26131 302 8 698 93 2 100 2002 TMEM143,EMP3,CCDC114,ZNF114,SYNGR4
SE_02_086300331 chr19:56298370-56316323 17953 331 6 505 30 2 8 271 ZNF542P,ZSCAN5A
SE_02_086300026 chr2:1538561-1658617 120056 26 30 4162 218 8 123 1500 PXDN,TPO
SE_02_086300367 chr2:156331560-156343655 12095 367 3 234 5 1 251 534 NR4A2
SE_02_086300264 chr2:159605084-159617921 12837 264 2 269 36 0 175 219 BAZ2B,LOC643072
SE_02_086300274 chr2:161094123-161140662 46539 274 20 1071 76 4 220 40 TANK
SE_02_086300134 chr2:1675510-1770218 94708 134 29 3057 181 6 9 582 PXDN
SE_02_086300348 chr2:181570836-181598226 27390 348 13 689 60 3 60 27 CERKL
SE_02_086300156 chr2:181769864-181793423 23559 156 2 614 21 0 98 0 NEUROD1,SSFA2
SE_02_086300165 chr2:181875772-181938733 62961 165 19 1508 5 3 265 1208 SSFA2,PPP1R1C
SE_02_086300052 chr2:189053820-189233202 179382 52 72 4373 329 3 338 1361 COL5A2,MIR3129
SE_02_086300029 chr2:189345546-189414766 69220 29 10 1739 181 3 89 0 WDR75
SE_02_086300334 chr2:201795444-201816153 20709 334 8 402 29 0 51 244 CDK15,ALS2
SE_02_086300036 chr2:223524335-223619107 94772 36 24 2613 56 7 343 330 SCG2
SE_02_086300285 chr2:223688379-223729330 40951 285 12 1166 47 2 68 0 SCG2
SE_02_086300075 chr2:231100308-231258545 158237 75 72 4104 366 9 209 1287 PSMD1,ARMC9,HTR2B
SE_02_086300043 chr2:234240899-234382294 141395 43 41 4342 119 12 117 0 ARL4C
SE_02_086300316 chr2:234484113-234505363 21250 316 4 591 16 0 134 673 ARL4C
SE_02_086300278 chr2:27068989-27084552 15563 278 3 415 18 1 224 1659 AGBL5,EMILIN1,OST4,KHK,TMEM214,CGREF1,AGBL5-AS1,ABHD1
SE_02_086300035 chr2:29306754-29452407 145653 35 21 4315 183 27 691 310 ALK,CLIP4
SE_02_086300103 chr2:41831932-41887114 55182 103 13 2081 70 7 107 218 LOC388942,LOC101929723
SE_02_086300241 chr2:41926313-41956038 29725 241 10 970 71 4 222 721 LOC101929723,C2ORF91,LOC388942
SE_02_086300207 chr2:42045042-42101047 56005 207 15 1826 128 4 344 1112 PKDCC
SE_02_086300147 chr2:42117087-42147972 30885 147 8 916 80 4 141 0 LOC102723824,EML4
SE_02_086300160 chr2:42168431-42245478 77047 160 30 2585 232 1 118 186 LOC102723824,EML4
SE_02_086300347 chr2:43218272-43229633 11361 347 2 382 18 0 198 1185 LINC01126,ZFP36L2
SE_02_086300354 chr2:46630933-46665290 34357 354 21 1105 153 7 48 0 PIGF,SOCS5,CRIPT
SE_02_086300163 chr2:46699090-46784938 85848 163 30 2512 271 8 167 526 SOCS5,LINC01118,LINC01119
SE_02_086300064 chr2:46835632-46916985 81353 64 19 2794 295 5 102 1425 TTC7A,MCFD2,LINC01119,LINC01118
SE_02_086300071 chr2:65253161-65437941 184780 71 59 5100 379 49 506 1589 SPRED2,ACTR2
SE_02_086300181 chr2:67840342-67887085 46743 181 7 1483 2 6 247 0 LOC101927701
SE_02_086300155 chr2:68030420-68063531 33111 155 4 894 45 0 45 300 C1D
SE_02_086300330 chr2:70118993-70144367 25374 330 11 708 83 1 44 273 LOC100133985,PCBP1,PCBP1-AS1,C2ORF42
SE_02_086300148 chr20:47304685-47362689 58004 148 26 1614 8 4 199 1313 ZMYND8,LOC100131496
SE_02_086300047 chr20:51560379-51661772 101393 47 15 2993 250 13 155 1763 ATP9A,NFATC2
SE_02_086300062 chr20:51678432-51815695 137263 62 50 4204 403 4 0 1522 SALL4,ATP9A,LINC01429
SE_02_086300078 chr20:51918151-52008171 90020 78 47 2447 16 5 103 0 LINC01429
SE_02_086300135 chr20:53548021-53599217 51196 135 12 1524 88 8 166 962 LOC101927770,ZNF217
SE_02_086300112 chr20:53642572-53687459 44887 112 15 1211 24 3 76 0 ZNF217
SE_02_086300014 chr20:53736883-53944348 207465 14 51 5994 107 18 163 237 BCAS1,SUMO1P1
SE_02_086300262 chr21:16157268-16197625 40357 262 17 1150 1 3 107 68 MIR99AHG
SE_02_086300210 chr22:30193693-30263465 69772 210 24 1909 167 15 432 1399 LIF,OSM,GATSL3
SE_02_086300190 chr22:35959505-36028969 69464 190 28 1684 52 1 221 199 RBFOX2
SE_02_086300290 chr22:46068876-46089140 20264 290 4 627 19 1 144 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B
SE_02_086300183 chr3:113079811-113114486 34675 183 7 962 99 8 132 0 LOC101929717
SE_02_086300355 chr3:113143274-113154808 11534 355 5 354 37 1 52 0 LOC101929717
SE_02_086300214 chr3:113208905-113289049 80144 214 37 2243 210 2 459 2908 BOC,CFAP44,LOC101929717
SE_02_086300104 chr3:11757978-11847364 89386 104 28 2585 165 2 112 823 TAMM41,VGLL4
SE_02_086300154 chr3:128998558-129038337 39779 154 20 1032 62 1 73 828 EFCC1,GP9,KIAA1257
SE_02_086300313 chr3:129160421-129198202 37781 313 13 1061 45 0 144 717 ISY1,ISY1-RAB43,CNBP,RAB43
SE_02_086300022 chr3:141302171-141452903 150732 22 50 3655 138 35 471 1423 ZBTB38,RASA2
SE_02_086300005 chr3:56027154-56178937 151783 5 26 3951 208 5 575 195 ERC2,MIR3938
SE_02_086300255 chr3_JH636055v2_alt:140908-172992 32084 255 5 0 0 0 0 0 TAMM41
SE_02_086300044 chr4:112838792-112947252 108460 44 25 2711 59 5 162 17 ANK2
SE_02_086300358 chr4:113102595-113119088 16493 358 5 425 16 3 100 36 ANK2,MIR1243,MIR8082
SE_02_086300060 chr4:123396096-123454206 58110 60 12 1534 35 2 115 737 SPRY1
SE_02_086300276 chr4:123482869-123511237 28368 276 4 742 56 0 9 75 SPRY1
SE_02_086300018 chr4:123545615-123623827 78212 18 14 2019 102 5 184 0 LINC01091
SE_02_086300201 chr4:123736378-123756719 20341 201 7 542 26 3 19 0 LINC01091
SE_02_086300004 chr4:123770911-123945592 174681 4 32 4457 178 10 319 368 LINC01091
SE_02_086300162 chr4:124016136-124034066 17930 162 2 447 1 1 28 0 LINC01091
SE_02_086300318 chr4:124108610-124116243 7633 318 1 156 0 2 8 0 LINC01091
SE_02_086300129 chr4:144333070-144380304 47234 129 9 1153 30 39 269 0 GYPA
SE_02_086300329 chr4:156293070-156324448 31378 329 12 809 4 2 48 0 CTSO
SE_02_086300185 chr4:156940174-156972318 32144 185 7 823 5 3 200 214 PDGFC
SE_02_086300133 chr4:56742416-56804311 61895 133 14 1803 52 3 37 0 SPINK2
SE_02_086300270 chr4:7872602-7939830 67228 270 29 2519 293 5 68 100 LOC389199,AFAP1
SE_02_086300030 chr4:87465999-87549867 83868 30 19 2179 311 4 184 718 SPARCL1,NUDT9
SE_02_086300232 chr4:87823424-87854048 30624 232 9 887 126 9 55 388 MEPE,IBSP
SE_02_086300200 chr5:125547533-125599920 52387 200 13 1530 3 0 124 0 LOC101927460
SE_02_086300092 chr5:125998962-126063506 64544 92 16 1938 107 6 260 0 LOC102546228,LOC101927488
SE_02_086300136 chr5:126096436-126128463 32027 136 4 925 45 2 77 0 LOC102546228,LOC101927488
SE_02_086300325 chr5:142000379-142026133 25754 325 8 599 60 3 0 884 GNPDA1,RNF14,PCDH12
SE_02_086300189 chr5:145925556-145983812 58256 189 26 1523 104 4 186 192 SH3RF2
SE_02_086300089 chr5:149414400-149458867 44467 89 1 1336 47 7 126 820 MIR143HG,MIR145,MIR143,IL17B
SE_02_086300113 chr5:149463599-149493167 29568 113 1 817 38 3 25 0 MIR143,MIR145
SE_02_086300296 chr5:150777028-150801196 24168 296 6 589 86 5 66 507 SMIM3,DCTN4,IRGM
SE_02_086300072 chr5:157478511-157576950 98439 72 32 2766 361 57 381 2351 ADAM19,NIPAL4
SE_02_086300171 chr5:38406153-38443626 37473 171 9 1133 46 3 144 719 EGFLAM,EGFLAM-AS2
SE_02_086300095 chr5:65009598-65042064 32466 95 3 809 56 6 170 80 CWC27
SE_02_086300027 chr5:65059128-65156355 97227 27 17 2474 213 14 437 352 ADAMTS6,CWC27
SE_02_086300314 chr5:65476809-65485058 8249 314 2 206 27 1 142 111 ADAMTS6
SE_02_086300123 chr5:73900688-73953262 52574 123 4 1500 45 10 236 517 ARHGEF28
SE_02_086300087 chr5:73983052-74061735 78683 87 19 2185 66 8 117 0 ARHGEF28,LINC01333
SE_02_086300341 chr5:74607630-74649673 42043 341 21 1124 69 0 257 1002 ENC1,HEXB
SE_02_086300040 chr5:78876704-78987818 111114 40 41 2985 382 21 223 564 ARSB
SE_02_086300111 chr5:92547576-92582428 34852 111 5 781 0 5 211 0 NR2F1-AS1
SE_02_086300127 chr5:92631508-92649148 17640 127 3 370 2 1 189 0 NR2F1-AS1
SE_02_086300277 chr5:92798075-92806117 8042 277 1 198 0 1 87 0 NR2F1-AS1
SE_02_086300100 chr5:92881449-92939333 57884 100 10 1339 29 7 254 0 NR2F1-AS1
SE_02_086300257 chr5:93568648-93582999 14351 257 1 308 12 0 157 470 NR2F1-AS1,NR2F1,MIR2277
SE_02_086300106 chr5:93583133-93609787 26654 106 1 491 13 1 662 869 NR2F1,NR2F1-AS1,MIR2277
SE_02_086300203 chr5:94844402-94865130 20728 203 5 506 37 2 125 0 MCTP1,SLF1
SE_02_086300172 chr5:94881088-94909509 28421 172 3 656 18 4 213 133 MCTP1,SLF1
SE_02_086300324 chr6:101108127-101126996 18869 324 5 454 31 0 95 0 ASCC3
SE_02_086300231 chr6:101140551-101184122 43571 231 15 1142 65 0 99 0 GRIK2,ASCC3
SE_02_086300253 chr6:101199392-101228213 28821 253 7 753 39 2 50 0 GRIK2,ASCC3
SE_02_086300362 chr6:132836286-132846172 9886 362 1 308 57 1 24 0 RPS12,SNORD101,SNORD100,SNORA33,SLC18B1
SE_02_086300069 chr6:132903592-132972004 68412 69 9 1915 220 7 286 0 MIR4459,SNORA33
SE_02_086300149 chr6:133240469-133377511 137042 149 67 3761 365 22 448 329 EYA4
SE_02_086300122 chr6:133544745-133611609 66864 122 19 1767 77 12 182 42 TARID,LINC01312
SE_02_086300337 chr6:139135117-139188319 53202 337 23 1336 106 1 140 839 HECA
SE_02_086300012 chr6:139218032-139376654 158622 12 45 4382 251 6 509 1271 CITED2,TXLNB
SE_02_086300261 chr6:143672091-143702089 29998 261 9 772 63 5 123 181 PHACTR2
SE_02_086300212 chr6:165079424-165118968 39544 212 7 1281 3 4 22 0 C6ORF118
SE_02_086300365 chr6:165176043-165189373 13330 365 2 409 0 1 0 0 C6ORF118
SE_02_086300228 chr6:165215988-165246086 30098 228 6 915 17 4 68 0 C6ORF118
SE_02_086300211 chr6:168627367-168671817 44450 211 14 1453 77 5 41 426 SMOC2
SE_02_086300289 chr6:168935647-168957679 22032 289 4 755 66 0 17 0 LOC101929504
SE_02_086300204 chr6:1861877-1918578 56701 204 25 1506 18 7 255 0 GMDS,FOXC1
SE_02_086300213 chr6:1937602-2064084 126482 213 56 3575 35 6 260 82 GMDS
SE_02_086300218 chr6:2155532-2245600 90068 218 46 2530 80 7 236 158 GMDS,GMDS-AS1
SE_02_086300159 chr6:2428985-2452415 23430 159 1 662 75 6 160 23 LINC01600
SE_02_086300202 chr6:3975558-4033031 57473 202 20 1539 137 5 97 291 PRPF4B,C6ORF201,FAM217A
SE_02_086300175 chr6:40990905-41030050 39145 175 10 1061 76 4 44 377 UNC5CL,LOC101929555,APOBEC2,TSPO2,OARD1,NFYA
SE_02_086300017 chr6:42166036-42263587 97551 17 29 2935 418 25 289 2880 GUCA1B,TRERF1,GUCA1A,MRPS10,C6ORF132
SE_02_086300227 chr6:63802923-63826488 23565 227 6 516 18 1 25 50 EYS,PHF3
SE_02_086300320 chr6:63844269-63882283 38014 320 6 1077 61 1 17 39 EYS,PHF3
SE_02_086300353 chr7:104975430-104988834 13404 353 1 327 18 0 26 762 LINC01004,LHFPL3-AS2,KMT2E-AS1,KMT2E
SE_02_086300194 chr7:130348578-130398618 50040 194 19 1373 150 5 296 2583 CEP41,CPA5,CPA1
SE_02_086300174 chr7:130900336-130928812 28476 174 1 839 42 2 100 118 LOC100506860,LINC-PINT,MIR29A,MIR29B1
SE_02_086300057 chr7:43098436-43341983 243547 57 102 6660 431 31 194 1075 MIR3943,HECW1
SE_02_086300345 chr7:5419613-5429446 9833 345 2 294 2 0 234 846 TNRC18
SE_02_086300180 chr7:6199054-6265295 66241 180 19 2207 139 3 104 0 CYTH3
SE_02_086300055 chr7:69931871-70162085 230214 55 80 5300 106 11 192 86 AUTS2
SE_02_086300141 chr7:76282600-76395778 113178 141 30 3395 364 10 320 3150 SRRM3,YWHAG,HSPB1,SSC4D,ZP3
SE_02_086300132 chr8:102526451-102563005 36554 132 5 1109 113 7 77 190 ODF1
SE_02_086300164 chr8:107273151-107366347 93196 164 32 2357 26 3 386 294 ANGPT1
SE_02_086300025 chr8:107379740-107464312 84572 25 13 2224 112 15 325 0 ANGPT1
SE_02_086300115 chr8:107477563-107501936 24373 115 1 614 10 2 178 113 ANGPT1
SE_02_086300139 chr8:126823763-126846280 22517 139 4 593 1 6 61 0 PCAT1,PRNCR1
SE_02_086300192 chr8:128849641-128880638 30997 192 8 842 0 8 76 0 LINC00824,LINC00977
SE_02_086300048 chr8:129533291-129595847 62556 48 11 1760 1 5 207 0 CCDC26,MIR3686
SE_02_086300021 chr8:129669490-129731730 62240 21 13 1743 153 9 162 0 CCDC26
SE_02_086300120 chr8:17646773-17699699 52926 120 19 2416 266 10 171 411 MTUS1,MIR548V
SE_02_086300169 chr8:2912166-2942959 30793 169 10 1409 4 6 61 353 CSMD1,LOC101927815
SE_02_086300166 chr8:2976324-3001333 25009 166 3 1195 4 1 20 172 CSMD1,LOC101927815
SE_02_086300098 chr8:73407373-73517698 110325 98 31 2859 165 16 476 541 STAU2-AS1,STAU2
SE_02_086300195 chr8_KI270810v1_alt:297201-329002 31801 195 6 0 0 0 0 0
SE_02_086300114 chr9:121264548-121340471 75923 114 18 2002 212 3 315 2896 GSN,STOM,GSN-AS1
SE_02_086300193 chr9:129458435-129502458 44023 193 14 1292 82 0 137 450 LINC00963
SE_02_086300096 chr9:130755109-130867223 112114 96 35 3090 192 8 136 733 ABL1,QRFP
SE_02_086300082 chr9:27107495-27213979 106484 82 38 3465 454 22 329 1239 TEK
SE_02_086300054 chr9:35902459-35955739 53280 54 10 1497 204 4 101 691 HRCT1,LINC00961,LINC00950,OR2S2,OR13J1
SE_02_086300361 chr9:70410583-70422872 12289 361 4 274 14 0 272 385 KLF9
SE_02_086300126 chr9:7133810-7187410 53600 126 17 1911 90 19 83 389 KDM4C
SE_02_086300235 chr9:72348968-72368202 19234 235 5 468 37 2 132 970 ZFAND5,LINC01504
SE_02_086300011 chr9:72472144-72616535 144391 11 38 3603 295 26 325 148 TMC1
SE_02_086300151 chr9:7317588-7383144 65556 151 16 2583 13 4 143 0 TMEM261
SE_02_086300118 chr9:90095818-90143889 48071 118 4 1335 27 10 40 0 LOC286370
SE_02_086300097 chr9:90286947-90339466 52519 97 13 1345 91 6 10 0 LINC01508
SE_02_086300187 chr9:90772787-90816897 44110 187 14 1306 187 18 31 181 SYK
SE_02_086300186 chrX:109372687-109406521 33834 186 9 634 19 0 200 678 GUCY2F
SE_02_086300216 chrX:109467148-109489893 22745 216 3 411 19 0 92 215 GUCY2F,NXT2
SE_02_086300237 chrX:110407729-110446580 38851 237 12 681 22 0 413 355 AMMECR1,RGAG1
SE_02_086300065 chrX:124210341-124306994 96653 65 28 1813 45 9 303 0 SH2D1A
SE_02_086300252 chrX:124348274-124390038 41764 252 10 700 4 0 353 865 SH2D1A,TENM1
SE_02_086300307 chrX:41777050-41800409 23359 307 6 353 11 0 82 29 CASK,GPR82
SE_02_086300266 chrX:45764635-45812473 47838 266 17 855 12 0 182 0 MIR222,MIR221,LOC401585,LOC392452
SE_02_086300295 chrX:47481524-47524262 42738 295 14 735 51 3 28 231 ZNF41,LINC01560,ARAF
SE_02_086300287 chrX:826182-866481 40299 287 11 1599 9 0 0 88 SHOX,PPP2R3B

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM3558592
Input ID: Name:GSM3558571
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb