Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_148700207 chr1:113809520-113832299 22779 207 6 492 40 3 133 429 AP4B1-AS1,PTPN22,RSBN1
SE_02_148700147 chr1:116349567-116366308 16741 147 7 421 7 0 48 0 ATP1A1
SE_02_148700047 chr1:147044578-147063608 19030 47 6 667 81 0 16 0 RNVU1-8,LOC728989
SE_02_148700216 chr1:149443973-149451962 7989 216 4 0 6 0 0 0 PPIAL4C
SE_02_148700210 chr1:150093516-150110997 17481 210 6 412 39 1 24 105 VPS45,PLEKHO1
SE_02_148700034 chr1:156103436-156130294 26858 34 11 651 64 4 206 594 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_148700199 chr1:156746766-156751488 4722 199 4 121 9 0 40 118 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24
SE_02_148700108 chr1:161185811-161202119 16308 108 3 402 28 2 155 1527 ADAMTS4,NDUFS2,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2
SE_02_148700167 chr1:163585750-163592349 6599 167 4 184 0 0 31 0 LOC100422212
SE_02_148700106 chr1:164633918-164648758 14840 106 6 421 3 4 157 240 PBX1
SE_02_148700094 chr1:164752887-164771447 18560 94 5 497 5 3 117 274 LOC100505795,PBX1
SE_02_148700189 chr1:170084898-170097968 13070 189 4 355 48 1 30 0 METTL11B,KIFAP3
SE_02_148700157 chr1:170586300-170593742 7442 157 4 180 5 0 117 0 LOC101928650
SE_02_148700049 chr1:170661839-170677126 15287 49 5 400 27 1 112 161 PRRX1
SE_02_148700099 chr1:172141179-172155354 14175 99 4 358 11 5 120 348 DNM3OS,DNM3,MIR199A2,MIR3120,MIR214
SE_02_148700204 chr1:177728425-177735564 7139 204 5 196 3 0 16 0 LOC101928778,SEC16B
SE_02_148700054 chr1:183821441-183844559 23118 54 9 655 42 3 61 0 RGL1
SE_02_148700209 chr1:184887626-184896723 9097 209 5 211 13 0 42 101 FAM129A
SE_02_148700178 chr1:185313124-185323237 10113 178 4 288 5 0 59 160 IVNS1ABP,GS1-279B7.1
SE_02_148700194 chr1:185346246-185353817 7571 194 4 175 13 1 18 0 IVNS1ABP,GS1-279B7.1
SE_02_148700064 chr1:185645126-185663651 18525 64 8 531 5 0 30 0 LINC01350
SE_02_148700004 chr1:185680061-185722147 42086 4 14 1166 70 1 39 0 HMCN1
SE_02_148700092 chr1:185803991-185817112 13121 92 10 317 22 0 56 0 HMCN1
SE_02_148700148 chr1:185833011-185853528 20517 148 6 480 25 0 93 38 HMCN1
SE_02_148700198 chr1:192538354-192546490 8136 198 5 170 6 2 30 0 RGS1
SE_02_148700018 chr1:198892341-198935346 43005 18 19 991 25 2 173 39 MIR181A1HG,MIR181A1,MIR181B1
SE_02_148700035 chr1:199148719-199177353 28634 35 7 707 10 1 82 0 LINC01222
SE_02_148700077 chr1:201535327-201553614 18287 77 9 486 35 0 85 0 CSRP1,RPS10P7
SE_02_148700150 chr1:210060532-210073958 13426 150 5 299 24 2 0 0 SYT14,SERTAD4
SE_02_148700176 chr1:210290256-210295751 5495 176 6 154 33 3 49 0 HHAT
SE_02_148700032 chr1:213977254-213999995 22741 32 6 536 29 6 316 497 PROX1-AS1,PROX1
SE_02_148700095 chr1:214392679-214419623 26944 95 8 836 30 4 68 283 PTPN14,SMYD2
SE_02_148700220 chr1:214439001-214448881 9880 220 3 263 20 1 11 0 PTPN14
SE_02_148700016 chr1:218373791-218409951 36160 16 12 1021 32 8 169 522 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_148700093 chr1:218452513-218461584 9071 93 6 244 7 10 28 0 MIR548F3,TGFB2-OT1
SE_02_148700208 chr1:224497611-224504352 6741 208 3 174 17 0 19 0 WDR26
SE_02_148700036 chr1:230220767-230238081 17314 36 9 499 43 0 25 135 GALNT2
SE_02_148700113 chr1:230268330-230281930 13600 113 4 529 24 1 31 597 GALNT2,PGBD5
SE_02_148700183 chr1:234599605-234618878 19273 183 4 547 37 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_148700191 chr1:23553849-23562234 8385 191 4 316 20 1 93 382 ID3,E2F2,LOC101928163
SE_02_148700116 chr1:236640059-236656987 16928 116 4 524 89 3 7 0 ACTN2,HEATR1
SE_02_148700197 chr1:236698743-236706850 8107 197 6 184 12 1 23 0 ACTN2
SE_02_148700007 chr1:241515058-241560596 45538 7 13 1321 112 7 60 365 KMO,FH
SE_02_148700142 chr1:241701060-241717342 16282 142 5 450 25 2 24 35 WDR64
SE_02_148700012 chr1:25319769-25373441 53672 12 18 1071 86 2 25 972 RHCE,RHD,TMEM50A
SE_02_148700226 chr1:28506144-28510737 4593 226 1 184 16 0 0 360 SNORA73B,RCC1,SNHG3,SNORA73A,TRNAU1AP
SE_02_148700117 chr1:30250270-30260570 10300 117 5 346 1 1 21 0 LOC101929406,MATN1-AS1
SE_02_148700107 chr1:30509337-30525202 15865 107 10 561 5 2 2 0 MATN1-AS1
SE_02_148700041 chr1:38024959-38068304 43345 41 17 1042 41 1 535 764 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_148700211 chr1:43763755-43773361 9606 211 5 250 29 0 12 0 ST3GAL3,LOC101929592
SE_02_148700014 chr1:64889221-64923828 34607 14 20 797 76 0 81 0 JAK1
SE_02_148700120 chr1:78408607-78427888 19281 120 9 540 26 1 22 0 PTGFR
SE_02_148700234 chr10:117131605-117137486 5881 234 2 123 5 0 78 613 VAX1,SHTN1,MIR3663,MIR3663HG
SE_02_148700075 chr10:117160263-117175889 15626 75 5 425 9 0 60 289 MIR3663,MIR3663HG,KCNK18,SHTN1,VAX1
SE_02_148700068 chr10:18134849-18159659 24810 68 8 756 69 3 90 287 CACNB2
SE_02_148700089 chr10:21516061-21532566 16505 89 9 303 8 0 393 789 SKIDA1,MLLT10,CASC10,MIR1915
SE_02_148700170 chr10:29369300-29382547 13247 170 7 407 27 2 30 0 SVIL-AS1
SE_02_148700052 chr10:29411311-29449534 38223 52 13 1111 154 0 0 289 SVIL-AS1
SE_02_148700074 chr10:32375362-32402823 27461 74 9 721 96 5 59 80 EPC1,CCDC7,LOC102031319,LOC101929431
SE_02_148700161 chr10:60463943-60481228 17285 161 7 432 41 1 6 0 ANK3
SE_02_148700224 chr10:61970193-61995261 25068 224 8 616 3 2 199 32 ARID5B
SE_02_148700037 chr10:62037401-62085127 47726 37 17 1150 55 11 397 307 ARID5B
SE_02_148700096 chr11:110349498-110363525 14027 96 8 402 34 0 34 121 RDX
SE_02_148700129 chr11:134986791-135008438 21647 129 9 722 63 0 0 20 LOC283177,GLB1L2
SE_02_148700026 chr11:16342264-16386045 43781 26 15 946 11 5 347 0 SOX6
SE_02_148700045 chr11:16598922-16621121 22199 45 15 443 17 1 394 227 C11ORF58
SE_02_148700223 chr11:33923234-33935668 12434 223 7 352 4 0 95 0 LMO2
SE_02_148700111 chr11:34044656-34054764 10108 111 5 313 29 1 63 445 CAPRIN1
SE_02_148700193 chr11:65418499-65426970 8471 193 2 237 8 1 35 663 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_148700044 chr11:65477005-65505571 28566 44 9 846 82 4 44 844 MALAT1,SCYL1,MIR612
SE_02_148700013 chr11:69618813-69652147 33334 13 13 966 26 5 139 797 CCND1,ORAOV1
SE_02_148700086 chr11:83601541-83642499 40958 86 10 1101 87 1 86 191 DLG2
SE_02_148700015 chr11:83713230-83750123 36893 15 13 991 23 1 91 0 DLG2
SE_02_148700039 chr12:114392821-114413497 20676 39 6 624 12 4 151 1421 TBX5-AS1,TBX5
SE_02_148700145 chr12:114472405-114481433 9028 145 6 280 0 5 34 0 TBX5
SE_02_148700196 chr12:14879093-14896932 17839 196 8 499 35 1 29 307 MGP,ERP27,ART4
SE_02_148700121 chr12:54014249-54026618 12369 121 7 274 17 1 283 158 HOXC4,HOXC6,HOXC5,HOXC8,HOTAIR,HOXC11,HOXC-AS2,HOXC9,HOXC-AS1,MIR196A2,FLJ12825,HOXC10,MIR615,HOXC-AS3
SE_02_148700066 chr12:63909117-63944802 35685 66 9 909 37 2 85 0 SRGAP1
SE_02_148700020 chr12:71866539-71925916 59377 20 25 1439 148 5 149 667 TBC1D15,TPH2,MRS2P2
SE_02_148700130 chr12:72267501-72280852 13351 130 9 316 14 1 133 464 TRHDE-AS1,TRHDE
SE_02_148700174 chr12:81274227-81296593 22366 174 7 599 29 1 78 179 PPFIA2,LOC102724663
SE_02_148700152 chr13:100297011-100311304 14293 152 5 323 4 0 124 136 PCCA,PCCA-AS1
SE_02_148700154 chr13:112089426-112103682 14256 154 8 384 0 1 74 0 LINC00403,SOX1
SE_02_148700135 chr13:31010986-31022726 11740 135 10 337 5 0 19 0 TEX26,LINC00545
SE_02_148700221 chr13:36366611-36378958 12347 221 3 337 44 0 6 167 SPG20,SPG20-AS1
SE_02_148700192 chr13:40650506-40664689 14183 192 4 391 36 0 21 0 FOXO1
SE_02_148700069 chr13:46040442-46056624 16182 69 5 346 44 1 53 341 CPB2-AS1,ZC3H13,CPB2
SE_02_148700046 chr13:46101971-46126672 24701 46 12 721 57 2 40 137 CPB2,LCP1,ZC3H13,CPB2-AS1
SE_02_148700149 chr13:60080450-60101813 21363 149 11 501 18 0 63 26 DIAPH3,DIAPH3-AS2
SE_02_148700022 chr13:64069116-64114010 44894 22 22 1271 0 0 38 188 LOC102723968
SE_02_148700031 chr14:102522516-102549579 27063 31 11 909 82 1 2 113 MIR4309,RCOR1,ANKRD9
SE_02_148700125 chr14:21640785-21659311 18526 125 11 487 17 0 11 113 OR10G2,OR4E2
SE_02_148700203 chr14:76946688-76962334 15646 203 5 410 29 0 91 0 IRF2BPL
SE_02_148700062 chr14:77024685-77043730 19045 62 7 505 31 7 420 928 IRF2BPL,LOC283575,LOC102724190
SE_02_148700017 chr14:97206406-97238969 32563 17 14 959 0 1 34 0 LOC101929241
SE_02_148700024 chr14:99236510-99273808 37298 24 20 912 2 3 381 322 BCL11B
SE_02_148700171 chr15:69074127-69085562 11435 171 4 323 4 0 26 214 EWSAT1
SE_02_148700091 chr15:98852714-98875424 22710 91 9 669 14 2 79 0 IGF1R,MIR4714
SE_02_148700163 chr16:11349135-11362556 13421 163 4 505 65 7 34 138 RMI2,MIR548H2
SE_02_148700126 chr16:23852338-23868125 15787 126 9 426 62 4 35 0 PRKCB
SE_02_148700166 chr16:23894501-23906876 12375 166 5 342 40 1 32 0 PRKCB
SE_02_148700215 chr16:24977981-24990396 12415 215 7 341 29 0 22 32 ARHGAP17,LOC554206
SE_02_148700063 chr16:25782755-25810330 27575 63 12 679 4 1 49 0 HS3ST4
SE_02_148700109 chr16:70687703-70716526 28823 109 10 904 89 0 176 1296 VAC14,VAC14-AS1,MTSS1L
SE_02_148700040 chr16:74534812-74561293 26481 40 22 730 96 0 15 0 GLG1
SE_02_148700076 chr16:8569110-8580789 11679 76 5 437 21 1 11 289 TMEM114,METTL22
SE_02_148700230 chr16:9186420-9200755 14335 230 7 587 2 2 17 0 C16ORF72
SE_02_148700056 chr17:43231432-43252448 21016 56 5 0 0 0 0 0 RNU2-1,TMEM106A,LINC00854
SE_02_148700038 chr17:43266761-43301098 34337 38 8 0 0 0 0 0 RNU2-1,LINC00854
SE_02_148700188 chr17:48541871-48554977 13106 188 4 316 25 1 329 1447 HOXB3,HOXB2,HOXB-AS1,HOXB-AS3,HOXB1,MIR10A,HOXB6,HOXB4,HOXB5
SE_02_148700006 chr17:48981360-49027531 46171 6 23 1036 59 5 240 443 IGF2BP1,SNF8,GIP
SE_02_148700219 chr17:69313581-69325176 11595 219 5 307 24 0 16 166 ABCA5
SE_02_148700137 chr17:7037079-7052768 15689 137 3 501 53 2 138 1056 SLC16A11,SLC16A13,ALOX12,RNASEK,MIR497HG,MIR195,MIR497,BCL6B,CLEC10A,C17ORF49,ALOX12-AS1
SE_02_148700065 chr17:7116099-7136961 20862 65 11 599 52 1 2 0 ASGR1,CLEC10A,ASGR2
SE_02_148700110 chr17:77461723-77478155 16432 110 5 486 6 0 20 231 SEPT9
SE_02_148700071 chr17:81387155-81404106 16951 71 11 556 40 1 281 274 BAHCC1,MIR4740,LOC100130370,MIR3186
SE_02_148700058 chr18:10056913-10071425 14512 58 7 439 9 2 0 0 VAPA
SE_02_148700028 chr18:10455098-10479837 24739 28 9 670 55 3 0 270 APCDD1,LINC01254,NAPG
SE_02_148700134 chr18:48922831-48935478 12647 134 9 424 11 6 81 0 SMAD7
SE_02_148700132 chr18:63364949-63388462 23513 132 6 586 29 1 19 193 KDSR,BCL2,VPS4B
SE_02_148700168 chr18:72755507-72770364 14857 168 12 478 0 1 14 31 NETO1,MIR548AV
SE_02_148700008 chr19:12996508-13039722 43214 8 17 1066 43 0 551 331 NFIX,DAND5,GADD45GIP1
SE_02_148700195 chr19:48084156-48091882 7726 195 6 263 44 0 5 131 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_148700156 chr19:50725261-50746128 20867 156 5 571 41 1 12 145 CLEC11A,ACPT,SHANK1,GPR32
SE_02_148700072 chr2:133495412-133527929 32517 72 9 975 19 3 98 38 NCKAP5
SE_02_148700141 chr2:151327220-151339534 12314 141 6 357 36 0 26 153 LOC101929319,NMI,MIR4773-1,TNFAIP6,MIR4773-2
SE_02_148700123 chr2:178245209-178278362 33153 123 8 838 50 0 52 0 OSBPL6
SE_02_148700118 chr2:182910051-182928481 18430 118 5 437 30 0 24 106 NCKAP1,FRZB
SE_02_148700021 chr2:182999755-183038353 38598 21 26 910 86 0 118 279 NCKAP1,DUSP19
SE_02_148700173 chr2:197070071-197090045 19974 173 10 459 35 3 81 294 ANKRD44,PGAP1
SE_02_148700127 chr2:201404796-201433833 29037 127 6 709 75 0 42 74 TRAK2,STRADB,ALS2CR12
SE_02_148700082 chr2:212892550-212914196 21646 82 9 602 2 0 128 0 MIR4776-1,MIR4776-2
SE_02_148700139 chr2:215535823-215555567 19744 139 7 498 13 0 92 0 LOC102724849
SE_02_148700151 chr2:222290120-222306031 15911 151 8 510 6 1 191 951 PAX3,CCDC140
SE_02_148700103 chr2:223040863-223063554 22691 103 5 565 16 1 146 544 KCNE4
SE_02_148700222 chr2:227933576-227942385 8809 222 5 265 30 0 12 0 DAW1
SE_02_148700081 chr2:30143213-30160797 17584 81 11 449 7 1 120 699 YPEL5
SE_02_148700090 chr2:85246677-85277830 31153 90 7 924 70 1 111 0 TCF7L1,TGOLN2
SE_02_148700160 chr2:85741427-85756681 15254 160 4 473 44 1 160 384 ATOH8,GNLY,MIR6071
SE_02_148700128 chr2:8676981-8686556 9575 128 5 307 9 0 245 321 ID2,ID2-AS1
SE_02_148700205 chr20:1948733-1960432 11699 205 6 330 37 4 16 64 PDYN
SE_02_148700023 chr20:4463402-4492235 28833 23 11 789 23 1 42 0 PRNP
SE_02_148700217 chr21:14208021-14218375 10354 217 4 279 32 0 26 164 LIPI,RBM11
SE_02_148700119 chr21:16772775-16794752 21977 119 10 578 2 0 95 0 MIR125B2
SE_02_148700050 chr21:44910722-44935000 24278 50 8 916 105 3 2 1380 ITGB2,LINC01547,ITGB2-AS1,FAM207A,PTTG1IP
SE_02_148700133 chr22:46054479-46061774 7295 133 1 195 18 1 46 424 PRR34-AS1,PRR34,MIR3619,LINC00899,LOC730668,MIRLET7BHG
SE_02_148700144 chr22:46062782-46069901 7119 144 1 185 9 1 46 0 PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_148700083 chr3:146125082-146157010 31928 83 12 806 93 1 27 0 PLOD2
SE_02_148700124 chr3:195179714-195196951 17237 124 6 515 8 1 8 164 XXYLT1,MIR3137,XXYLT1-AS2
SE_02_148700169 chr3:33914988-33922190 7202 169 3 198 9 0 0 0 PDCD6IP
SE_02_148700027 chr3:34261028-34295934 34906 27 15 984 7 0 109 0 PDCD6IP
SE_02_148700029 chr3:35633826-35677727 43901 29 12 1142 54 4 155 357 ARPP21
SE_02_148700202 chr3:47660180-47666791 6611 202 4 142 8 0 13 113 SMARCC1,CSPG5
SE_02_148700087 chr3:58229835-58250635 20800 87 9 556 100 0 12 269 ABHD6,DNASE1L3
SE_02_148700206 chr3:8309470-8316415 6945 206 3 181 0 0 23 0 LMCD1-AS1
SE_02_148700180 chr3:8362947-8372607 9660 180 8 308 12 2 38 37 LMCD1-AS1
SE_02_148700048 chr4:115086976-115118929 31953 48 15 854 43 2 102 62 NDST4
SE_02_148700235 chr4:138220974-138239449 18475 235 7 499 31 2 79 114 SLC7A11
SE_02_148700088 chr4:14999895-15020626 20731 88 12 491 26 0 183 962 CPEB2,CPEB2-AS1,LOC101929095
SE_02_148700213 chr4:164362037-164381242 19205 213 5 462 0 2 15 0 MARCH1
SE_02_148700186 chr4:17091318-17100286 8968 186 7 264 8 0 30 0 LOC101929123
SE_02_148700201 chr4:174118680-174136927 18247 201 5 552 49 0 77 40 LOC101928509
SE_02_148700102 chr4:174201453-174218752 17299 102 8 469 28 6 125 0 LOC101928509
SE_02_148700140 chr4:3116912-3125924 9012 140 6 218 11 0 28 129 HTT,HTT-AS
SE_02_148700030 chr4:40195550-40224089 28539 30 10 807 29 0 34 106 RHOH
SE_02_148700184 chr4:86582108-86599110 17002 184 4 406 49 0 0 263 PTPN13,MIR4452
SE_02_148700042 chr4:86953719-86981805 28086 42 16 748 65 4 56 0 AFF1,LOC100506746
SE_02_148700233 chr4:86998800-87014461 15661 233 4 411 38 3 42 177 AFF1
SE_02_148700060 chr5:133864711-133886299 21588 60 10 601 19 2 63 0 WSPAR
SE_02_148700155 chr5:155040534-155054557 14023 155 5 328 32 1 39 0 KIF4B
SE_02_148700177 chr5:159049955-159073530 23575 177 5 545 6 1 334 34 EBF1,LOC101927740
SE_02_148700122 chr5:163457001-163469244 12243 122 4 298 18 0 24 365 HMMR,NUDCD2,CCNG1,MAT2B,HMMR-AS1
SE_02_148700073 chr6:110282657-110299335 16678 73 8 414 52 1 61 52 METTL24
SE_02_148700009 chr6:110321882-110368535 46653 9 14 1234 95 6 141 273 METTL24,DDO
SE_02_148700200 chr6:134718266-134725122 6856 200 3 164 14 0 28 0 LOC101928304
SE_02_148700187 chr6:137341847-137356454 14607 187 5 403 1 5 70 0 IFNGR1
SE_02_148700115 chr6:148493043-148511081 18038 115 4 521 20 3 85 54 SASH1
SE_02_148700227 chr6:24325049-24341882 16833 227 8 473 38 3 30 0 DCDC2,KAAG1
SE_02_148700182 chr6:98831196-98845066 13870 182 6 329 21 0 325 607 POU3F2
SE_02_148700025 chr7:116211185-116241790 30605 25 14 674 78 0 98 133 TES,LOC102724434
SE_02_148700078 chr7:116455568-116471297 15729 78 5 403 56 0 5 33 CAV2
SE_02_148700005 chr7:116486638-116535786 49148 5 16 1272 194 12 207 1136 CAV1,CAV2
SE_02_148700001 chr7:130886557-130971323 84766 1 28 2285 154 6 222 277 LINC-PINT,LOC100506860,MIR29A,MIR29B1
SE_02_148700146 chr7:141343443-141363426 19983 146 7 499 19 0 109 0 TMEM178B,AGK
SE_02_148700057 chr7:30321468-30354516 33048 57 9 811 42 0 24 20 ZNRF2,LINC01176,MIR550A1,MIR550B1,DKFZP586I1420
SE_02_148700085 chr7:5418315-5430000 11685 85 4 350 3 0 243 846 TNRC18
SE_02_148700104 chr7:82367274-82394815 27541 104 9 850 20 4 85 0 CACNA2D1
SE_02_148700079 chr7:84134804-84163139 28335 79 16 773 38 8 89 27 SEMA3A
SE_02_148700229 chr7:90719470-90740858 21388 229 7 576 51 0 32 53 CDK14
SE_02_148700172 chr8:106146640-106154706 8066 172 3 201 2 3 45 0 ZFPM2-AS1
SE_02_148700051 chr8:126809635-126834183 24548 51 10 606 4 7 50 0 PCAT1,PRNCR1
SE_02_148700059 chr8:12744110-12758202 14092 59 9 471 47 0 132 352 LONRF1,MIR3926-2,MIR3926-1,LINC00681
SE_02_148700143 chr8:127808978-127819167 10189 143 8 251 12 0 8 0 MIR1204
SE_02_148700158 chr8:12865204-12873559 8355 158 4 314 1 1 11 0 LOC340357
SE_02_148700033 chr8:12925923-12954524 28601 33 7 1149 121 5 54 50 KIAA1456
SE_02_148700179 chr8:129444970-129451891 6921 179 4 162 0 0 32 0 CCDC26,MIR3686
SE_02_148700043 chr8:13192013-13224809 32796 43 15 1255 67 2 126 79 DLC1
SE_02_148700061 chr8:13489502-13508102 18600 61 9 709 27 6 80 123 DLC1
SE_02_148700080 chr8:21544703-21553571 8868 80 6 303 7 0 26 0 GFRA2
SE_02_148700003 chr8:27183814-27228273 44459 3 12 1148 60 4 27 0 STMN4
SE_02_148700067 chr8:30097858-30113952 16094 67 8 385 42 5 36 246 LEPROTL1,DCTN6,SARAF,MBOAT4
SE_02_148700228 chr8:37726989-37734369 7380 228 3 203 6 0 49 157 LOC101929622,ERLIN2,ZNF703,PROSC,LOC102723701,LOC728024
SE_02_148700232 chr8:37797221-37803525 6304 232 4 182 9 2 62 157 ADGRA2,LOC728024,BRF2,PROSC
SE_02_148700153 chr8:52141940-52153332 11392 153 6 293 10 3 72 103 ST18,PCMTD1
SE_02_148700225 chr8:56539719-56557874 18155 225 6 522 18 0 26 276 LOC101929415,LINC00968
SE_02_148700011 chr8:6245303-6264207 18904 11 4 1158 8 3 33 0 LOC100287015
SE_02_148700165 chr8:64832333-64842459 10126 165 9 235 18 0 6 0 CYP7B1
SE_02_148700164 chr8:64988926-64999854 10928 164 4 254 7 0 138 0 LINC00251
SE_02_148700159 chr8:66558348-66566849 8501 159 5 175 9 0 75 183 MYBL1
SE_02_148700212 chr8:69868098-69875660 7562 212 9 227 8 0 12 0 SLCO5A1
SE_02_148700084 chr8:74110583-74129848 19265 84 7 613 13 4 22 0 LY96
SE_02_148700138 chr8:9345397-9351832 6435 138 2 241 19 3 12 0 LOC157273
SE_02_148700175 chr8:9551481-9559897 8416 175 3 295 19 2 53 260 TNKS
SE_02_148700185 chr8:96578464-96588309 9845 185 5 257 2 2 34 79 SDC2,CPQ
SE_02_148700098 chr8:9676132-9699719 23587 98 6 731 41 4 77 55 TNKS,MIR597
SE_02_148700131 chr8:98857238-98869619 12381 131 8 329 6 1 41 0 STK3
SE_02_148700181 chr9:115411337-115418259 6922 181 4 164 20 2 20 0 DEC1
SE_02_148700231 chr9:115590834-115597701 6867 231 5 182 14 1 38 0 LOC101928775
SE_02_148700019 chr9:123027417-123089413 61996 19 20 1424 102 1 126 550 GPR21,RABGAP1,MIR600HG,MIR600
SE_02_148700101 chr9:123333360-123349654 16294 101 8 498 31 3 31 0 CRB2
SE_02_148700114 chr9:129481542-129497930 16388 114 5 448 23 0 69 419 LINC00963
SE_02_148700112 chr9:129695178-129713323 18145 112 9 512 51 4 37 55 PRRX2,PRRX2-AS1,PTGES
SE_02_148700097 chr9:14308255-14323530 15275 97 7 370 1 0 231 191 NFIB
SE_02_148700214 chr9:14403139-14420860 17721 214 5 550 5 0 61 0 NFIB
SE_02_148700010 chr9:15841279-15886864 45585 10 28 1387 103 0 199 167 CCDC171,RNU6-14P
SE_02_148700055 chr9:4653807-4670621 16814 55 7 669 75 2 104 655 PPAPDC2,SPATA6L,CDC37L1,CDC37L1-AS1
SE_02_148700100 chr9:62799167-62803464 4297 100 1 26 0 0 0 178 LINC01410,PTGER4P2-CDK2AP2P2
SE_02_148700190 chr9:72576845-72586572 9727 190 4 229 19 1 40 64 TMC1
SE_02_148700105 chr9:86530682-86550460 19778 105 9 552 6 1 17 0 ZCCHC6
SE_02_148700162 chrX:19117831-19128528 10697 162 6 195 9 0 1 190 ADGRG2
SE_02_148700218 chrX:19174316-19184255 9939 218 6 240 14 1 0 0 ADGRG2
SE_02_148700053 chrX:2811802-2832508 20706 53 8 426 37 0 0 504 XG,GYG2
SE_02_148700002 chrX:52489082-52523766 34684 2 2 0 5 0 0 1735 XAGE1E,XAGE1B
SE_02_148700070 chrX:52650969-52667760 16791 70 6 502 32 0 0 269 SSX7,SSX8,SSX2B,SSX2
SE_02_148700136 chrX:69286382-69302931 16549 136 9 388 7 0 73 0 LINC00269,PJA1

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM5364014
Input ID: Name:GSM5364015
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb