SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000132819
Gene: RBM38 Gene type: protein_coding
Strand: + External links:
Genomic region: chr20:57391396-57409333 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087500461 chr20:57354773-57454592 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 461 28 3330 219 19 154 1654 RAE1,MTRNR2L3,RBM38,SPO11,MIR4325,CTCFL
SE_02_104700028 chr20:57361769-57453603 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 28 46 3029 186 16 150 1433 RAE1,RBM38,SPO11,MIR4325,MTRNR2L3
SE_02_128900006 chr20:57370248-57509021 Sample_02_1289 Lung NCI-H526_p8-15 6 50 4619 262 40 157 2121 CTCFL,RAE1,RBM38,MTRNR2L3,MIR4325,SPO11
SE_02_104300140 chr20:57370399-57493529 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 140 72 4092 247 35 151 1394 RAE1,RBM38,CTCFL,MTRNR2L3,MIR4325,SPO11
SE_02_152900241 chr20:57370438-57476885 Sample_02_1529 Peripheral blood neutrophils_0BC75 241 36 3570 209 27 151 1313 RAE1,RBM38,CTCFL,MTRNR2L3,MIR4325,SPO11
SE_02_069200006 chr20:57370442-57509165 Sample_02_0692 Lung NCI-H526_no infection 6 53 4619 262 40 157 2121 CTCFL,RAE1,RBM38,MTRNR2L3,MIR4325,SPO11
SE_02_143201090 chr20:57372217-57415453 Sample_02_1432 Bone A673 STAG2 WT 1090 23 1521 103 3 109 1259 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_077900063 chr20:57372858-57408985 Sample_02_0779 Lymphoma U2932 63 11 1260 84 1 90 1142 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_101701271 chr20:57372870-57425710 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1271 13 1824 123 9 112 1313 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_104600101 chr20:57373026-57502274 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 101 65 4250 250 39 156 1808 CTCFL,RAE1,RBM38,MTRNR2L3,SPO11
SE_02_122900209 chr20:57373882-57464514 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 209 37 3019 178 17 139 1261 RAE1,RBM38,SPO11,MTRNR2L3,CTCFL,PCK1
SE_02_104800056 chr20:57373912-57473613 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 56 40 3350 199 27 144 1260 RAE1,RBM38,SPO11,MTRNR2L3
SE_00_005500529 chr20:57374154-57403545 Sample_00_0055 Spleen spleen 34y 529 10 978 71 1 73 763 RAE1,RBM38,SPO11,MTRNR2L3
SE_00_005600619 chr20:57374281-57401645 Sample_00_0056 Sigmoid colon sigmoid colon 3y 619 10 884 68 1 73 763 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_104000059 chr20:57374298-57409873 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 59 26 1241 82 1 91 1206 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_089201455 chr20:57374477-57410231 Sample_02_0892 Heart left ventricle_LV1215 1455 9 1255 85 1 93 1195 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_115300451 chr20:57374570-57402106 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 451 3 899 68 1 73 741 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_119500615 chr20:57374780-57401220 Sample_02_1195 Brain GBM29 615 7 851 68 1 69 720 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_143301247 chr20:57374840-57415497 Sample_02_1433 Bone A673 STAG2 null 1247 19 1420 98 3 96 1150 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_118800151 chr20:57374942-57473653 Sample_02_1188 Brain GBM18 151 25 3309 197 27 138 1184 RAE1,RBM38,SPO11,MTRNR2L3
SE_01_009800906 chr20:57375051-57410635 Sample_01_0098 Heart left ventricle_51y 906 10 1243 84 1 91 1111 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_082601217 chr20:57375175-57400069 Sample_02_0826 Stomach gastric tumor 1217 13 778 65 1 67 633 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_074700561 chr20:57375420-57413490 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 561 19 1347 95 1 91 1034 RAE1,RBM38,SPO11,MTRNR2L3
SE_00_004600529 chr20:57375470-57410281 Sample_00_0046 Heart right ventricle_34y 529 14 1218 84 1 90 1024 RAE1,RBM38,SPO11,MTRNR2L3,BMP7
SE_02_119301056 chr20:57375485-57400735 Sample_02_1193 Brain GBM27 1056 6 803 66 1 67 580 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_119400882 chr20:57375842-57401642 Sample_02_1194 Brain GBM28 882 9 832 66 1 67 569 RAE1,RBM38,SPO11,MTRNR2L3
SE_02_074600007 chr20:57379514-57499274 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 7 31 3963 233 37 138 1282 CTCFL,RBM38,RAE1,MTRNR2L3,SPO11
SE_02_078100233 chr20:57380183-57412156 Sample_02_0781 Lymphoma Pfeiffer_DMSO 233 8 1162 75 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_115500255 chr20:57381631-57402931 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 255 3 727 51 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_068800005 chr20:57381982-57508831 Sample_02_0688 Lung NCI-H211_no infection 5 57 4241 235 39 139 1757 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_106500118 chr20:57381995-57402690 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 118 4 711 49 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_130400699 chr20:57382009-57401643 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 699 6 654 48 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_130300769 chr20:57382025-57401289 Sample_02_1303 Lymphoma RL_tazemetostat 769 6 640 48 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_146600295 chr20:57382062-57419097 Sample_02_1466 Blood HUDEP-2_BCL11AKO 295 12 1322 86 5 94 907 RBM38,RAE1,MTRNR2L3
SE_02_101800012 chr20:57382091-57433905 Sample_02_1018 Erythroblast CD34+ Hematopoietic stem/progenitor cells_12 days 12 13 1781 105 9 100 961 RBM38,RAE1,MTRNR2L3
SE_02_128400004 chr20:57382098-57510305 Sample_02_1284 Lung NCI-H211_p8-15 4 48 4263 235 39 139 1769 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_121800192 chr20:57382115-57402866 Sample_02_1218 Bone marrow Daudi 192 13 708 49 0 62 464 RBM38,RAE1,MTRNR2L3
SE_04_000101244 chr20:57382125-57393937 Sample_04_0001 Blood heat shocked K562 1244 2 335 24 0 39 464 RBM38,RAE1,MTRNR2L3
SE_02_146800579 chr20:57382132-57419224 Sample_02_1468 Blood HUDEP-2_WT 579 9 1320 86 5 94 907 RBM38,RAE1,MTRNR2L3
SE_02_078200846 chr20:57382147-57401897 Sample_02_0782 Blood MEC1 846 3 656 47 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_111100491 chr20:57382213-57441397 Sample_02_1111 Other HGrC1_SMAD2/3KO 491 25 2019 122 11 114 961 RBM38,RAE1,MTRNR2L3
SE_02_078800101 chr20:57382225-57507659 Sample_02_0788 Brain 3565 101 34 4196 233 39 138 1655 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_128300436 chr20:57382839-57399621 Sample_02_1283 Lung NCI-H2107_p8-15 436 6 536 42 0 55 464 RBM38,RAE1,MTRNR2L3
SE_01_010900997 chr20:57382953-57409222 Sample_01_0109 Colon transverse colon_54y 997 6 961 58 0 73 862 RBM38,RAE1,MTRNR2L3
SE_02_107000193 chr20:57385354-57425720 Sample_02_1070 Blood SupT1_WT 193 11 1449 87 8 94 961 RBM38,RAE1,MTRNR2L3
SE_02_103601448 chr20:57385361-57407884 Sample_02_1036 Mammary gland HCC70_XY018 1448 7 842 45 0 72 583 RBM38,RAE1,MTRNR2L3
SE_02_115100071 chr20:57386062-57502165 Sample_02_1151 Mammary gland MCF-7_UNTR 71 47 3855 212 38 138 1456 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_116200520 chr20:57387340-57452429 Sample_02_1162 Stomach YCC11 520 22 2233 126 13 122 961 RBM38,RAE1,MTRNR2L3
SE_01_009600449 chr20:57388419-57401890 Sample_01_0096 B-cell lymphoma DOHH2 449 3 484 29 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_054501008 chr20:57388710-57393180 Sample_02_0545 Bone marrow K562 WT 1008 1 127 5 0 34 396 RBM38,RAE1,MTRNR2L3
SE_02_075000501 chr20:57388722-57403059 Sample_02_0750 Lymphoma Rec-1_GSI 501 7 541 30 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_146700444 chr20:57388726-57419221 Sample_02_1467 Blood HUDEP-2_LRFKO 444 10 1140 67 5 94 907 RBM38,RAE1,MTRNR2L3
SE_02_106900073 chr20:57388768-57483193 Sample_02_1069 Bone marrow Bone marrow aspirate 73 18 3203 175 27 133 961 RBM38,RAE1,CTCFL,MTRNR2L3
SE_01_009700381 chr20:57388772-57410486 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 381 3 847 45 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_073900753 chr20:57388778-57401913 Sample_02_0739 Blood Nalm6 753 5 478 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_122500353 chr20:57388890-57401750 Sample_02_1225 Bone marrow RAJI 353 7 466 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_092300501 chr20:57388910-57412129 Sample_02_0923 Heart fetal heart_PCW10_12522 501 10 918 50 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_092400438 chr20:57388919-57411123 Sample_02_0924 Heart fetal heart_PCW10_12569 438 10 865 45 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_078300646 chr20:57388922-57401667 Sample_02_0783 Blood MEC2 646 2 464 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_01_009400857 chr20:57388933-57409548 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 857 6 810 42 0 80 907 RBM38,RAE1,MTRNR2L3
SE_02_109600194 chr20:57388958-57416881 Sample_02_1096 Blood CD34 Erythroid cells_Don003 194 3 1059 64 5 94 907 RBM38,RAE1,MTRNR2L3
SE_02_136300070 chr20:57388969-57433866 Sample_02_1363 Blood Hudep2 70 6 1592 86 9 100 961 RBM38,RAE1,MTRNR2L3
SE_02_095300541 chr20:57388999-57442062 Sample_02_0953 Brain H3.3K27M_1840 541 19 1862 104 11 118 961 RBM38,RAE1,MTRNR2L3
SE_02_088500565 chr20:57389004-57402354 Sample_02_0885 Blood NALM6_2 565 3 499 29 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_081700645 chr20:57389012-57400620 Sample_02_0817 Ovary Epithelial ovarian cancer 645 5 411 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_092500884 chr20:57389037-57410796 Sample_02_0925 Heart fetal heart_PCW17_12570 884 10 852 45 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_044800948 chr20:57389037-57450869 Sample_02_0448 Bone MNNG 948 18 2134 121 13 122 961 RBM38,RAE1,MTRNR2L3
SE_02_103501518 chr20:57389043-57409159 Sample_02_1035 Mammary gland HCC70_Vehicle 1518 5 788 41 0 72 841 RBM38,RAE1,MTRNR2L3
SE_02_120100056 chr20:57389049-57474150 Sample_02_1201 Brain GBM37 56 27 2920 158 26 133 961 RBM38,RAE1,MTRNR2L3
SE_02_119800117 chr20:57389051-57442284 Sample_02_1198 Brain GBM34 117 12 1866 104 11 119 961 RBM38,RAE1,MTRNR2L3
SE_02_122100552 chr20:57389058-57400254 Sample_02_1221 Bone marrow KMS11 552 4 394 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_119700242 chr20:57389064-57442554 Sample_02_1197 Brain GBM33 242 20 1878 104 11 119 961 RBM38,RAE1,MTRNR2L3
SE_02_054200254 chr20:57389076-57481669 Sample_02_0542 Brain Kelly_ResJQ1 254 36 3152 172 27 133 961 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_059100405 chr20:57389078-57401536 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 405 6 454 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_054400143 chr20:57389099-57481587 Sample_02_0544 Brain Kelly_ResVeh 143 35 3148 172 27 133 961 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_121000560 chr20:57389101-57399900 Sample_02_1210 Brain GBM17 560 8 376 25 0 60 464 RBM38,RAE1,MTRNR2L3
SE_02_075100681 chr20:57389101-57402622 Sample_02_0751 Lymphoma Rec-1_WO 681 7 508 29 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_121900228 chr20:57389111-57400445 Sample_02_1219 Bone marrow H929 228 2 404 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_00_004700440 chr20:57389115-57400606 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 440 5 409 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_118400152 chr20:57389119-57473921 Sample_02_1184 Brain GBM13 152 28 2916 158 26 133 961 RBM38,RAE1,MTRNR2L3
SE_02_072900538 chr20:57389121-57401247 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 538 3 443 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_059300487 chr20:57389123-57402942 Sample_02_0593 Fetal spleenocytes fetal naive T cells 487 6 519 30 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_122200481 chr20:57389131-57400052 Sample_02_1222 Bone marrow KMS12 481 6 384 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_101501028 chr20:57389136-57425807 Sample_02_1015 Embryo H9_ Undifferentiated 1028 9 1346 80 8 94 961 RBM38,RAE1,MTRNR2L3
SE_02_059400304 chr20:57389166-57481578 Sample_02_0594 iPSC-derived neural progenitors 304 19 3145 172 27 133 961 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_115600340 chr20:57389179-57401190 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 340 7 438 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_074500004 chr20:57389181-57498797 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 4 21 3672 205 37 138 1276 CTCFL,RBM38,RAE1,MTRNR2L3
SE_02_075800384 chr20:57389182-57402597 Sample_02_0758 Peripheral blood REH 384 5 503 29 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_057300414 chr20:57389195-57401908 Sample_02_0573 Blood Nalm6_1 414 4 466 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_133200462 chr20:57389200-57436532 Sample_02_1332 Blood Monomac6_CTRL 462 11 1683 93 9 100 961 RBM38,RAE1,MTRNR2L3
SE_02_101300615 chr20:57389204-57401699 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 615 11 457 28 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_114200355 chr20:57389208-57411878 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 355 3 895 48 0 86 907 RBM38,RAE1,MTRNR2L3
SE_02_098200070 chr20:57389213-57442097 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 70 20 1857 104 11 118 961 RBM38,RAE1,MTRNR2L3
SE_02_114600033 chr20:57389229-57441951 Sample_02_1146 Peripheral nerve STS26T PRC2 WT 33 16 1850 104 11 115 961 RBM38,RAE1,MTRNR2L3
SE_02_074400398 chr20:57389266-57416547 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 398 10 1042 62 3 94 907 RBM38,RAE1,MTRNR2L3
SE_02_138400153 chr20:57389287-57480988 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 153 20 3126 171 27 133 961 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_098000411 chr20:57389294-57399914 Sample_02_0980 Brain BT245 411 5 371 25 0 61 464 RBM38,RAE1,MTRNR2L3
SE_02_096600504 chr20:57389355-57416287 Sample_02_0966 Brain H3.3K27M_JN29-BS3 504 11 1033 60 2 94 907 RBM38,RAE1,MTRNR2L3
SE_02_067401209 chr20:57389359-57400177 Sample_02_0674 Endometrium E1_FA 1209 5 386 26 0 62 464 RBM38,RAE1,MTRNR2L3
SE_02_092200875 chr20:57392053-57410939 Sample_02_0922 Heart fetal heart_PCW10_12434 875 6 776 41 0 58 656 RBM38,RAE1,MTRNR2L3
SE_02_115700502 chr20:57392063-57401577 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 502 9 374 24 0 34 213 RBM38,RAE1,MTRNR2L3
SE_02_069600003 chr20:57392080-57495934 Sample_02_0696 Lung COR-L311 3 58 3511 199 35 106 818 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_104900189 chr20:57392081-57408454 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 189 1 681 35 0 44 439 RBM38,RAE1,MTRNR2L3
SE_02_066300407 chr20:57392087-57409093 Sample_02_0663 Thyroid TT 407 5 705 37 0 44 569 RBM38,RAE1,MTRNR2L3
SE_02_092100095 chr20:57392105-57495388 Sample_02_0921 Heart embryonic heart_CS22 95 30 3492 198 34 105 791 RBM38,RAE1,CTCFL,MTRNR2L3
SE_02_073600360 chr20:57393257-57401700 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 360 5 343 23 0 28 51 RBM38,RAE1,MTRNR2L3
SE_02_103900458 chr20:57394369-57404834 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 458 10 427 26 0 21 0 RBM38,RAE1,MTRNR2L3
SE_04_000101160 chr20:57408033-57465548 Sample_04_0001 Blood heat shocked K562 1160 11 1868 100 17 56 347 RBM38,MTRNR2L3,RAE1,CTCFL,PCK1
SE_02_084300020 chr20:57408574-57416938 Sample_02_0843 Umbilical cord blood HSPC-derived late erythroid precursors 20 9 291 25 5 22 204 RBM38,MTRNR2L3
SE_02_057600407 chr20:57408671-57498946 Sample_02_0576 Blood HEL_sgLKB1e2 407 38 2912 165 37 66 565 CTCFL,RBM38,MTRNR2L3
SE_02_058000407 chr20:57408817-57498877 Sample_02_0580 Blood HEL_sgSIK3e4 407 32 2903 164 37 66 530 CTCFL,RBM38,MTRNR2L3
SE_02_057900421 chr20:57408836-57465523 Sample_02_0579 Blood HEL_sgNeg2 421 23 1838 98 17 56 201 RBM38,MTRNR2L3
SE_02_098800926 chr20:57409213-57434151 Sample_02_0988 Blood K562_EPZ 926 11 810 45 9 27 96 RBM38,MTRNR2L3,RAE1,CTCFL,PCK1
SE_02_095800352 chr20:57409495-57442531 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 352 10 1074 62 11 39 62 RBM38,MTRNR2L3
SE_02_021600942 chr20:57410525-57435754 Sample_02_0216 Skin NHEK_scramble 942 5 809 45 9 14 54 RBM38
SE_02_084100162 chr20:57411395-57481715 Sample_02_0841 Blood THP-1_untr 162 20 2282 126 27 47 54 CTCFL,RBM38
SE_02_133100090 chr20:57411824-57498940 Sample_02_1331 Blood Molm13_CTRL 90 31 2785 157 37 52 375 CTCFL,RBM38
SE_02_133000100 chr20:57413645-57511233 Sample_02_1330 Blood AMU-AML1 100 34 3140 161 39 53 862 CTCFL,RBM38,PCK1
SE_02_153900896 chr20:57414084-57439711 Sample_02_1539 Nasopharyngeal C666-1 896 16 797 46 11 14 54 RBM38
SE_02_033200229 chr20:57414761-57495688 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 229 9 2586 146 34 48 135 RBM38,CTCFL
SE_02_119500331 chr20:57415019-57474004 Sample_02_1195 Brain GBM29 331 20 1917 101 25 47 54 RBM38
SE_02_119400594 chr20:57415110-57442480 Sample_02_1194 Brain GBM28 594 9 876 47 10 33 54 RBM38
SE_02_121000208 chr20:57415113-57442380 Sample_02_1210 Brain GBM17 208 7 868 47 10 33 54 RBM38
SE_02_096200603 chr20:57415174-57483280 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 603 15 2189 118 26 44 54 CTCFL,RBM38
SE_02_119300911 chr20:57415248-57474075 Sample_02_1193 Brain GBM27 911 14 1909 101 25 44 54 RBM38
SE_02_095600784 chr20:57416047-57473686 Sample_02_0956 Brain IDH1_2658 784 14 1877 98 24 39 54 RBM38
SE_02_096100104 chr20:57416629-57459014 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 104 9 1347 72 13 28 54 RBM38
SE_02_033700542 chr20:57416639-57474071 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 542 10 1869 95 22 39 54 RBM38
SE_02_109800181 chr20:57416875-57481748 Sample_02_1098 Blood THP1_DMSO_noPMA 181 16 2100 108 22 39 54 CTCFL,RBM38
SE_02_017600254 chr20:57418343-57499018 Sample_02_0176 Peripheral blood LOUCY 254 7 2571 140 32 44 375 CTCFL,RBM38
SE_02_032700486 chr20:57422112-57459526 Sample_02_0327 Liver hepatocytes_d6 486 6 1188 61 9 28 54 RBM38
SE_02_155300436 chr20:57423234-57481072 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 436 28 1873 94 19 39 28 CTCFL,RBM38
SE_02_130300125 chr20:57424403-57504579 Sample_02_1303 Lymphoma RL_tazemetostat 125 29 2604 131 30 44 575 CTCFL,RBM38
SE_02_033400345 chr20:57424466-57495679 Sample_02_0334 Haematopoietic and lymphoid tissue MOLM14_CA25_11 345 8 2282 124 27 40 81 RBM38,CTCFL
SE_02_050200091 chr20:57424504-57498949 Sample_02_0502 Blood HL-60_PMA_16h 91 29 2380 126 29 44 321 CTCFL,RBM38
SE_02_035600360 chr20:57424633-57442571 Sample_02_0356 Colon Sw480 360 3 575 25 3 25 0 RBM38
SE_02_033500285 chr20:57424732-57482352 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 285 10 1864 95 19 39 0 RBM38,CTCFL
SE_02_153000563 chr20:57424797-57476658 Sample_02_1530 Peripheral blood neutrophils_0BA0X 563 12 1690 83 18 39 0 CTCFL,RBM38
SE_02_115400054 chr20:57424856-57507909 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 54 17 2705 135 31 44 732 CTCFL,RBM38
SE_02_033100225 chr20:57424879-57482367 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 225 10 1856 95 19 39 0 RBM38,CTCFL
SE_02_025600497 chr20:57424912-57475159 Sample_02_0256 Peripheral blood MV411 497 8 1638 82 18 39 0 RBM38,CTCFL
SE_02_131800313 chr20:57425151-57481571 Sample_02_1318 Brain hMGLs_SORL1-A528T 313 13 1821 93 19 39 0 CTCFL,RBM38
SE_02_050100101 chr20:57425171-57495357 Sample_02_0501 Blood HL-60_CTRL 101 23 2245 123 26 39 81 CTCFL,RBM38
SE_02_078100236 chr20:57425262-57507768 Sample_02_0781 Lymphoma Pfeiffer_DMSO 236 25 2682 135 31 44 717 CTCFL,RBM38
SE_00_004600664 chr20:57425320-57470475 Sample_00_0046 Heart right ventricle_34y 664 21 1468 78 17 39 0 RBM38,RAE1,MTRNR2L3
SE_02_081000539 chr20:57425593-57443534 Sample_02_0810 Mammary gland T47D noSerum 539 7 567 26 3 25 0 RBM38
SE_00_001400340 chr20:57427232-57459708 Sample_00_0014 Heart left ventricle heart-left-ventricle 340 4 1042 55 8 28 0 RBM38
SE_01_008200814 chr20:57427280-57459306 Sample_01_0082 Right lobe of liver right-lobe-of-liver 814 7 1019 55 8 28 0 RBM38
SE_02_032600935 chr20:57427431-57444302 Sample_02_0326 Liver hepatocytes_d3 935 3 536 28 4 25 0 RBM38
SE_02_032500851 chr20:57428024-57444205 Sample_02_0325 Liver hepatocytes_d1 851 3 517 28 4 25 0 RBM38
SE_02_038200126 chr20:57428216-57497532 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 126 6 2221 125 29 41 217 CTCFL,RBM38
SE_02_036800242 chr20:57428263-57471249 Sample_02_0368 Skeletal muscle NS134 242 9 1410 78 18 39 0 RBM38
SE_02_097700450 chr20:57428365-57473998 Sample_02_0977 Brain 2089_H3.3K27WT 450 12 1497 78 18 39 0 RBM38
SE_02_074700207 chr20:57428371-57495371 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 207 26 2152 122 26 39 81 CTCFL,RBM38
SE_02_043900689 chr20:57428526-57439764 Sample_02_0439 Bone Hu09 689 5 351 22 3 6 0 RBM38
SE_02_131400564 chr20:57429118-57452931 Sample_02_1314 Brain hMGLs_TREM2-KO 564 9 754 42 5 26 0 RBM38
SE_02_010400474 chr20:57429401-57476344 Sample_02_0104 Blood neutrophils 474 8 1523 80 18 37 0 RBM38,CTCFL
SE_02_153100574 chr20:57429496-57481970 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 574 18 1696 90 19 37 0 CTCFL,RBM38
SE_00_005500488 chr20:57429675-57495350 Sample_00_0055 Spleen spleen 34y 488 20 2100 120 26 37 81 CTCFL,RBM38
SE_01_004400121 chr20:57431122-57499335 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 121 7 2170 123 29 42 321 CTCFL,RBM38
SE_02_092300272 chr20:57431373-57495194 Sample_02_0923 Heart fetal heart_PCW10_12522 272 20 2039 119 26 37 81 CTCFL,RBM38
SE_02_035300292 chr20:57432018-57451056 Sample_02_0353 Colon HT29 292 3 604 38 5 26 0 RBM38
SE_02_137100698 chr20:57432109-57440246 Sample_02_1371 Pancreas Patu899S-untreated 698 3 246 18 3 5 0 RBM38
SE_02_037000686 chr20:57432186-57442954 Sample_02_0370 Skeletal muscle RH4 686 2 344 21 3 23 0 RBM38
SE_02_038100162 chr20:57432228-57496817 Sample_02_0381 Heart purified cardiomyocyte WT 162 7 2082 121 29 38 181 RBM38,CTCFL
SE_01_008100722 chr20:57432314-57495848 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 722 8 2043 119 27 38 88 RBM38,CTCFL
SE_01_007600914 chr20:57432321-57477189 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 914 4 1463 78 18 37 0 RBM38,CTCFL
SE_01_008300321 chr20:57432394-57496229 Sample_01_0083 Sigmoid colon sigmoid-colon 321 11 2052 119 27 38 145 RBM38,CTCFL
SE_01_007800559 chr20:57432462-57495622 Sample_01_0078 Heart left ventricle heart-left-ventricle 559 8 2029 119 27 38 81 RBM38,CTCFL
SE_02_036700379 chr20:57432476-57470927 Sample_02_0367 Skeletal muscle NS129 379 8 1266 74 18 37 0 RBM38
SE_01_007700222 chr20:57432479-57496349 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 222 13 2058 121 28 38 165 RBM38,CTCFL
SE_00_004300381 chr20:57432566-57495687 Sample_00_0043 Stomach stomach_96d 381 9 2027 119 27 38 81 RBM38,CTCFL
SE_01_009700506 chr20:57432567-57476774 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 506 7 1447 78 18 37 0 CTCFL,RBM38
SE_02_092400456 chr20:57432582-57446414 Sample_02_0924 Heart fetal heart_PCW10_12569 456 6 456 33 5 26 0 RBM38
SE_00_003400223 chr20:57432587-57470749 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 223 10 1253 74 18 37 0 RBM38
SE_02_092201047 chr20:57432605-57446297 Sample_02_0922 Heart fetal heart_PCW10_12434 1047 4 451 31 5 26 0 RBM38
SE_01_007400317 chr20:57432612-57496434 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 317 11 2055 120 28 38 173 RBM38,CTCFL
SE_00_003200442 chr20:57432689-57470590 Sample_00_0032 Psoas muscle psoas-muscle_30y 442 7 1244 73 17 37 0 RBM38
SE_01_010900972 chr20:57433265-57481515 Sample_01_0109 Colon transverse colon_54y 972 15 1575 87 19 33 0 CTCFL,RBM38
SE_02_080900521 chr20:57434056-57443901 Sample_02_0809 Mammary gland T47D Serum 521 2 321 21 3 19 0 RBM38
SE_02_107800542 chr20:57434824-57442473 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 542 5 259 17 2 19 0 RBM38
SE_01_008900705 chr20:57435263-57495900 Sample_01_0089 Transverse colon transverse-colon 705 8 1960 115 26 34 102 RBM38,CTCFL
SE_02_105800361 chr20:57436005-57514276 Sample_02_1058 Bone A673_SA2 Rescue 361 23 2536 130 30 41 860 CTCFL,RBM38,PCK1
SE_02_074400169 chr20:57440134-57446120 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 169 5 217 14 2 21 0 RBM38
Genomic distribution of SEs associated with RBM38
Genome Browser

The strength of the tissue affected by the gene

Expression of RBM38

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)