SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800926
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr20:57409213-57434151
Size: 24938
Super-enhancer rank 926
Number of SE elements: 11
ChIP density(Case|Control): 11990.1904|1179.5674
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RBM38 ;
ROSE Overlap RBM38 ;
ROSE Proximal RBM38 ; MTRNR2L3 ;
ROSE Closest RBM38 ;
Lasso RAE1 ; CTCFL ; PCK1 ; RBM38 ;
PreSTIGE ;
ABC ;
BETA MTRNR2L3 ; SPO11 ; RAE1 ; RBM38 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800926 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers