SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_078200846
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MEC1
Genomic region: chr20:57382147-57401897
Size: 19750
Super-enhancer rank 846
Number of SE elements: 3
ChIP density(Case|Control): 20320.775|1368.675
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RBM38 ;
ROSE Overlap RBM38 ;
ROSE Proximal RAE1 ; MTRNR2L3 ; RBM38 ;
ROSE Closest RBM38 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MTRNR2L3 ; SPO11 ; RAE1 ; MIR4325 ; RBM38 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078200846 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers