SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000128973
Gene: CLN6 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:68206992-68257211 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_130200393 chr15:68054282-68194190 Sample_02_1302 Lymphoma RL DMSO 393 38 3455 167 3 349 958 PIAS1,CALML4,CLN6
SE_02_038200143 chr15:68077045-68183955 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 143 14 2600 126 2 192 418 PIAS1,CALML4,CLN6
SE_02_014600171 chr15:68178664-68206292 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 171 6 771 41 2 103 1093 CALML4,PIAS1,CLN6
SE_02_140200192 chr15:68187503-68190793 Sample_02_1402 Blood MM.1S_GNE-781 192 2 97 5 1 34 91 PIAS1,CALML4,CLN6
SE_02_009900023 chr15:68253027-68306882 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 23 12 1269 115 2 188 1536 FEM1B,ITGA11,CALML4,CLN6
SE_02_050500720 chr15:68253187-68289306 Sample_02_0505 Esophagus KYSE70_1 720 12 842 82 1 74 547 FEM1B,CLN6,CALML4
SE_02_051600717 chr15:68253192-68289306 Sample_02_0516 Esophagus KYSE70 717 11 841 82 1 74 547 FEM1B,CLN6,CALML4
SE_02_155100538 chr15:68253273-68292847 Sample_02_1551 Gastrointestinal Stromal MaMel 538 10 905 85 1 142 801 FEM1B,CLN6,CALML4
SE_02_104301850 chr15:68254517-68281939 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1850 9 627 60 1 68 473 FEM1B,CLN6,CALML4
SE_01_007600266 chr15:68254813-68300523 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 266 3 1018 95 1 170 1042 FEM1B,CALML4,CLN6
SE_01_009700177 chr15:68254961-68300279 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 177 6 1013 95 1 170 1042 FEM1B,CLN6,CALML4
SE_01_007200251 chr15:68254972-68301846 Sample_01_0072 Breast epithelium breast-epithelium 251 8 1052 97 1 173 1091 FEM1B,ITGA11,CALML4,CLN6
SE_02_103700159 chr15:68255216-68288652 Sample_02_1037 Pharynx FaDu Control 159 9 773 75 1 71 504 FEM1B,CLN6,CALML4
SE_02_103800196 chr15:68255225-68287886 Sample_02_1038 Pharynx FaDu LPS 196 9 750 72 1 70 473 FEM1B,CLN6,CALML4
SE_01_009400311 chr15:68255242-68299730 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 311 5 995 92 1 170 1042 FEM1B,CLN6,CALML4
SE_01_008800796 chr15:68255749-68283646 Sample_01_0088 Tibial nerve tibial-nerve 796 3 629 63 1 70 473 FEM1B,CALML4,CLN6
SE_01_009100440 chr15:68255940-68282719 Sample_01_0091 Uterus uterus 440 4 610 61 1 69 473 FEM1B,CALML4,CLN6
SE_02_088600538 chr15:68255941-68297926 Sample_02_0886 Skin foreskin_ p63KLF4 538 9 931 84 1 170 1042 FEM1B,CLN6,CALML4
SE_01_008100449 chr15:68256047-68300208 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 449 5 983 89 1 170 1042 FEM1B,CALML4,CLN6
SE_01_008000401 chr15:68256053-68282863 Sample_01_0080 Prostate prostate 401 3 606 60 1 69 473 FEM1B,CALML4,CLN6
SE_01_007400695 chr15:68256061-68300432 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 695 5 988 90 1 170 1042 FEM1B,CALML4,CLN6
SE_02_006300103 chr15:68256073-68306279 Sample_02_0063 Skin Keratinocytes 103 8 1165 103 2 188 1536 FEM1B,ITGA11,CALML4,CLN6
SE_01_008300737 chr15:68256081-68283217 Sample_01_0083 Sigmoid colon sigmoid-colon 737 3 614 60 1 70 473 FEM1B,CALML4,CLN6
SE_02_009700023 chr15:68256085-68289060 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 23 8 761 72 1 74 526 FEM1B,CALML4,CLN6
SE_01_008600879 chr15:68256091-68283076 Sample_01_0086 Thoracic aorta thoracic-aorta 879 2 611 60 1 69 473 FEM1B,CALML4,CLN6
SE_02_136100277 chr15:68256138-68288592 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 277 8 748 71 1 71 504 FEM1B,CLN6
SE_02_117300805 chr15:68256165-68282321 Sample_02_1173 Brain GBM01 805 10 596 57 1 68 473 FEM1B,CLN6
SE_02_136200345 chr15:68256174-68289276 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 345 9 765 72 1 74 546 FEM1B,CLN6
SE_03_000300015 chr15:68256202-68282939 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 15 5 608 60 1 69 473 FEM1B,CLN6
SE_02_051800174 chr15:68256203-68314045 Sample_02_0518 Esophagus TT_Esophagus carcinoma 174 21 1427 118 2 202 2070 ITGA11,FEM1B,CLN6
SE_01_007000786 chr15:68256215-68282641 Sample_01_0070 Ascending aorta ascending-aorta 786 2 602 60 1 68 473 FEM1B,CLN6
SE_02_050800173 chr15:68256215-68314045 Sample_02_0508 Esophagus TT_1 173 21 1427 118 2 202 2070 ITGA11,FEM1B,CLN6
SE_02_136000473 chr15:68256217-68280089 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 473 7 535 51 1 66 473 FEM1B,CLN6
SE_02_005600605 chr15:68256229-68282127 Sample_02_0056 Mammary gland HMEC 605 7 592 56 1 68 473 FEM1B,CLN6
SE_02_125400353 chr15:68256234-68284922 Sample_02_1254 Bladder Bladder tumor Basal1 353 8 654 62 1 70 473 FEM1B,CLN6
SE_02_028400652 chr15:68256235-68282640 Sample_02_0284 Pelvis patient 119 652 5 602 60 1 68 473 FEM1B,CLN6
SE_02_070800349 chr15:68256244-68282789 Sample_02_0708 Pancreas hF3 organoid 349 11 606 60 1 69 473 FEM1B,CLN6
SE_01_010700445 chr15:68256248-68282618 Sample_01_0107 Esophagus esophagus squamous epithelium 445 7 602 60 1 68 473 FEM1B,CLN6
SE_02_071300615 chr15:68256255-68282310 Sample_02_0713 Pancreas BxPC3_sgTP63 615 9 596 57 1 68 473 FEM1B,CLN6
SE_02_090801027 chr15:68256256-68310637 Sample_02_0908 Heart left ventricle_DCM_LV1262 1027 16 1294 109 2 194 1687 ITGA11,FEM1B,CLN6
SE_02_071200434 chr15:68256261-68281960 Sample_02_0712 Pancreas BxPC3_sgNEG 434 9 588 55 1 68 473 FEM1B,CLN6
SE_02_010500140 chr15:68256268-68290047 Sample_02_0105 Skin neonatal_keratinocytes 140 6 783 72 1 91 611 FEM1B,CLN6
SE_01_002700203 chr15:68256293-68282710 Sample_01_0027 Prostate epithelial-cell-of-prostate 203 5 604 60 1 69 473 FEM1B,CLN6
SE_02_120300842 chr15:68256310-68282325 Sample_02_1203 Brain NB1 842 9 597 57 1 68 473 FEM1B,CLN6
SE_01_004500178 chr15:68256352-68289761 Sample_01_0045 Mammary gland mammary-epithelial-cell 178 5 777 72 1 82 588 FEM1B,CLN6
SE_02_026300480 chr15:68256368-68282721 Sample_02_0263 Osteoblastic hFOB_undifferentiated 480 4 605 60 1 69 473 FEM1B,CLN6
SE_02_088700724 chr15:68256376-68299867 Sample_02_0887 Heart left ventricle_LV1121 724 12 978 89 1 170 1042 FEM1B,CLN6
SE_02_066600090 chr15:68256377-68282279 Sample_02_0666 Prostate RWPE1 Lacz rep1 90 7 593 57 1 68 473 FEM1B,CLN6
SE_02_070700513 chr15:68256379-68282663 Sample_02_0707 Pancreas BxPC3 WT 513 11 603 60 1 68 473 FEM1B,CLN6
SE_02_061900486 chr15:68256384-68283831 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 486 5 625 61 1 70 473 FEM1B,CLN6
SE_01_004100146 chr15:68256384-68289671 Sample_01_0041 Skin keratinocyte 146 6 771 72 1 77 574 FEM1B,CLN6
SE_02_149300642 chr15:68256389-68283589 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 642 5 618 61 1 70 473 FEM1B,CLN6
SE_02_157200741 chr15:68256392-68282225 Sample_02_1572 iPSCs FiPSC 741 7 592 56 1 68 473 FEM1B,CLN6
SE_02_136600248 chr15:68256400-68281901 Sample_02_1366 Pancreas BxPC3-untreated 248 14 585 55 1 68 473 FEM1B,CLN6
SE_02_049900793 chr15:68256404-68283104 Sample_02_0499 Fetal lung IMR90 IR Senescence 793 8 611 60 1 69 473 FEM1B,CLN6,ITGA11
SE_02_005700230 chr15:68256404-68289382 Sample_02_0057 Mammary gland vHMEC 230 9 765 72 1 74 554 FEM1B,CLN6
SE_02_011000591 chr15:68256408-68292882 Sample_02_0110 Ovaries IOE11 591 5 833 77 1 142 815 FEM1B,CLN6
SE_02_048000280 chr15:68256425-68305894 Sample_02_0480 Gingival epithelial HGEP 280 20 1152 103 2 188 1536 ITGA11,FEM1B,CLN6
SE_02_064500241 chr15:68256432-68289316 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 241 7 763 72 1 74 549 FEM1B,CLN6
SE_02_064600217 chr15:68256449-68289019 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 217 8 756 71 1 74 525 FEM1B,CLN6
SE_02_086900308 chr15:68256453-68282319 Sample_02_0869 Fibroblast VH10_NO_UV 308 12 593 57 1 68 473 FEM1B,CLN6
SE_02_089800760 chr15:68256461-68299721 Sample_02_0898 Heart left ventricle_LV1356 760 12 970 88 1 170 1042 FEM1B,CLN6
SE_02_112100082 chr15:68256462-68288588 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 82 18 745 71 1 71 504 FEM1B,CLN6
SE_02_090200516 chr15:68256466-68311118 Sample_02_0902 Heart left ventricle_LV1558 516 17 1311 109 2 197 1742 ITGA11,FEM1B,CLN6
SE_02_046601206 chr15:68256470-68285825 Sample_02_0466 Adipose visceral adipocytes 1206 12 673 63 1 70 473 FEM1B,CLN6
SE_02_059500129 chr15:68256470-68289342 Sample_02_0595 Mammary gland MCF10A_scrshRNA_Nutlin3A 129 8 762 72 1 74 551 FEM1B,CLN6
SE_01_006100283 chr15:68256476-68282239 Sample_01_0061 Prostate RWPE1 283 5 591 56 1 68 473 FEM1B,CLN6
SE_02_060000193 chr15:68256485-68289263 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 193 8 760 72 1 74 544 FEM1B,CLN6
SE_02_059600440 chr15:68256488-68289185 Sample_02_0596 Mammary gland MCF10A_ DMSO 440 5 758 72 1 74 536 FEM1B,CLN6
SE_02_092500860 chr15:68256488-68291332 Sample_02_0925 Heart fetal heart_PCW17_12570 860 9 803 73 1 134 715 FEM1B,CLN6
SE_02_090301039 chr15:68256489-68282535 Sample_02_0903 Heart left ventricle_DCM_LV1009 1039 7 597 60 1 68 473 FEM1B,CLN6
SE_02_064700313 chr15:68256490-68288259 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 313 15 732 69 1 71 476 FEM1B,CLN6
SE_01_009300012 chr15:68256493-68432756 Sample_01_0093 Aorta ascending aorta 12 54 5209 263 17 483 4330 ITGA11,FEM1B,CLN6
SE_02_065000325 chr15:68256496-68299641 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 325 9 965 88 1 170 1042 FEM1B,CLN6
SE_03_000100078 chr15:68256503-68282834 Sample_03_0001 Foreskin foreskin-keratinocyte 78 4 601 60 1 69 472 FEM1B,CLN6
SE_02_064800359 chr15:68256514-68299256 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 359 17 950 85 1 170 1040 FEM1B,CLN6
SE_02_090500842 chr15:68256527-68310761 Sample_02_0905 Heart left ventricle_DCM_LV1033 842 10 1295 109 2 194 1685 ITGA11,FEM1B,CLN6
SE_02_060300402 chr15:68256528-68289264 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 402 8 760 72 1 74 542 FEM1B,CLN6
SE_02_090400724 chr15:68256530-68311109 Sample_02_0904 Heart left ventricle_DCM_LV1028 724 10 1309 109 2 197 1740 ITGA11,FEM1B,CLN6
SE_03_000200069 chr15:68256531-68282461 Sample_03_0002 Foreskin foreskin-keratinocyte-calcium2.5day 69 4 593 57 1 68 471 FEM1B,CLN6
SE_02_060200465 chr15:68256543-68288688 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 465 6 745 71 1 71 504 FEM1B,CLN6
SE_02_053000117 chr15:68256545-68305895 Sample_02_0530 Mammary gland MCF10A 117 16 1149 103 2 188 1533 ITGA11,FEM1B,CLN6
SE_02_064900566 chr15:68256561-68282037 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 566 10 585 55 1 68 468 FEM1B,CLN6
SE_02_090700554 chr15:68256562-68310990 Sample_02_0907 Heart left ventricle_DCM_LV1223 554 13 1304 109 2 194 1719 ITGA11,FEM1B,CLN6
SE_02_141600035 chr15:68256575-68430070 Sample_02_1416 Brain SF9402 35 46 5121 260 17 459 4181 ITGA11,FEM1B,CLN6
SE_02_060400150 chr15:68256578-68289113 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 150 5 756 72 1 74 516 FEM1B,CLN6
SE_02_091300685 chr15:68256586-68300240 Sample_02_0913 Heart left ventricle_DCM_LV1304 685 8 978 89 1 170 1027 FEM1B,CLN6
SE_02_059700385 chr15:68256594-68289213 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 385 8 758 72 1 74 522 FEM1B,CLN6
SE_02_065200247 chr15:68256596-68282314 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 247 15 591 57 1 68 458 FEM1B,CLN6
SE_02_047900330 chr15:68256607-68313395 Sample_02_0479 Head and neck SCC25 330 29 1394 118 2 200 1935 ITGA11,FEM1B,CLN6
SE_02_060100192 chr15:68256624-68288713 Sample_02_0601 Mammary gland MCF10A_p53shRNA_Nutlin3A 192 10 747 71 1 71 489 FEM1B,CLN6
SE_02_135900333 chr15:68256649-68288559 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 333 6 740 70 1 71 480 FEM1B,CLN6
SE_02_089000806 chr15:68256659-68310936 Sample_02_0890 Heart left ventricle_LV1200 806 8 1300 109 2 194 1683 ITGA11,FEM1B,CLN6
SE_02_076201500 chr15:68256683-68289060 Sample_02_0762 Podocyte podocyte_CTL 1500 5 751 72 1 74 500 FEM1B,CLN6
SE_02_056700240 chr15:68256694-68281865 Sample_02_0567 Mammary gland MCF7L-P_TAMR 240 10 574 55 1 68 447 FEM1B,CLN6
SE_02_124800267 chr15:68256701-68282351 Sample_02_1248 Bladder RT4 267 6 587 57 1 68 446 FEM1B,CLN6
SE_02_026600167 chr15:68256704-68275774 Sample_02_0266 Bronchial HBE_Primary human bronchial epithelial cells_ 167 6 406 40 1 25 152 FEM1B,CLN6
SE_02_072100175 chr15:68256710-68284614 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 175 11 633 62 1 70 445 FEM1B,CLN6
SE_02_107300568 chr15:68256710-68288563 Sample_02_1073 Keratinocyte keratinocytes stem cell 568 9 737 70 1 71 476 FEM1B,CLN6
SE_02_018500298 chr15:68256718-68283196 Sample_02_0185 Skin UACC257 298 6 603 60 1 70 444 FEM1B,CLN6
SE_02_135700265 chr15:68256726-68280376 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 265 9 529 51 1 67 444 FEM1B,CLN6
SE_02_091000955 chr15:68256747-68299830 Sample_02_0910 Heart left ventricle_DCM_LV1275 955 14 969 89 1 170 1009 FEM1B,CLN6
SE_02_072500299 chr15:68256754-68287956 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 299 7 719 69 1 70 439 FEM1B,CLN6
SE_02_135800310 chr15:68256758-68281122 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 310 8 543 51 1 68 439 FEM1B,CLN6
SE_02_066000511 chr15:68256815-68288277 Sample_02_0660 Mammary gland MCF10DCIS 511 8 728 69 1 71 425 FEM1B,CLN6
SE_02_113100517 chr15:68256914-68281994 Sample_02_1131 Pancreas T3M4 wt 517 10 574 55 1 68 395 FEM1B,CLN6
SE_02_088201102 chr15:68257029-68282426 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1102 4 580 56 1 68 369 FEM1B,CLN6
SE_02_003600810 chr15:68258694-68279067 Sample_02_0036 Embryo H7 810 6 446 42 1 60 294 FEM1B,CLN6
SE_02_088301168 chr15:68258708-68285054 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1168 4 595 59 1 70 294 FEM1B,CLN6
SE_02_152200570 chr15:68261142-68283715 Sample_02_1522 Skin A375 RTKi 570 4 512 54 1 70 294 FEM1B,CLN6
SE_02_004200490 chr15:68262990-68279367 Sample_02_0042 Embryo endodermal CyT49_ES_D0 490 3 362 34 1 62 294 FEM1B,CLN6
SE_00_001100478 chr15:68265904-68282430 Sample_00_0011 Esophagus esophagus 478 6 387 39 0 68 294 FEM1B,CLN6,FE1B
SE_02_018400196 chr15:68267200-68283555 Sample_02_0184 Skin SKMEL30 196 3 391 40 0 70 294 FEM1B,CLN6
SE_02_035900223 chr15:68267484-68283314 Sample_02_0359 Colon Colo741 223 3 380 39 0 70 294 FEM1B,CLN6
SE_02_029400755 chr15:68267672-68289518 Sample_02_0294 Pancreatic L3-6_DMSO 755 4 527 50 0 74 379 FEM1B,CLN6
SE_02_066100340 chr15:68267845-68289118 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 340 8 511 50 0 74 351 FEM1B,CLN6
SE_02_151500644 chr15:68267949-68283386 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 644 7 362 39 0 70 294 FEM1B,CLN6
SE_02_151600414 chr15:68268124-68283213 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 414 7 357 38 0 70 294 FEM1B,CLN6
SE_02_003301070 chr15:68269846-68283445 Sample_02_0033 Pancreas pancreatic-islets-F 1070 1 326 32 0 70 294 FEM1B,CLN6
SE_02_030101207 chr15:68270024-68283594 Sample_02_0301 Neuroblastoma GIMEN 1207 1 324 32 0 70 294 FEM1B,CLN6
SE_02_010700985 chr15:68270429-68283018 Sample_02_0107 Endometrium EEC16 985 2 307 30 0 69 294 FEM1B,CLN6
SE_01_007500673 chr15:68270525-68282660 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 673 3 301 30 0 68 294 FEM1B,CLN6
SE_02_076600916 chr15:68270539-68284098 Sample_02_0766 Ovary PEO1 916 6 331 31 0 70 294 FEM1B,CLN6
SE_02_074800485 chr15:68270547-68282421 Sample_02_0748 Mammary gland HCC1599_WO 485 2 295 27 0 68 294 FEM1B,CLN6
SE_02_153200688 chr15:68270575-68289506 Sample_02_1532 Mammary gland MCF10A 688 6 465 42 0 74 378 FEM1B,CLN6
SE_02_074900441 chr15:68270579-68282270 Sample_02_0749 Mammary gland HCC1599_GSI 441 2 291 27 0 68 294 FEM1B,CLN6
SE_00_003200255 chr15:68270592-68291477 Sample_00_0032 Psoas muscle psoas-muscle_30y 255 5 507 43 0 134 552 FEM1B,CLN6
SE_00_000300465 chr15:68270598-68302630 Sample_00_0003 Adrenal gland adrenal-gland_97d 465 5 751 66 0 179 1075 FEM1B,ITGA11,CLN6
SE_04_001000600 chr15:68270600-68280426 Sample_04_0010 Lung A549 TGFb 600 2 237 21 0 67 294 FEM1B,CLN6
SE_02_127901316 chr15:68270601-68313299 Sample_02_1279 Bone Mesenchymal stem cells 1316 13 1094 87 1 199 1773 ITGA11,FEM1B,CLN6
SE_02_088001193 chr15:68270635-68283405 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1193 3 310 30 0 70 294 FEM1B,CLN6
SE_02_087801049 chr15:68270635-68283659 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1049 3 315 30 0 70 294 FEM1B,CLN6
SE_02_061400847 chr15:68270647-68282118 Sample_02_0614 Liposarcoma MLPS_T2 847 5 287 25 0 68 294 FEM1B,CLN6
SE_02_113900846 chr15:68270652-68282748 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 846 3 301 29 0 69 294 FEM1B,CLN6
SE_02_074700582 chr15:68270665-68300594 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 582 11 685 59 0 170 863 FEM1B,CLN6
SE_02_147200858 chr15:68270668-68282021 Sample_02_1472 Fetal lung IMR-90 858 4 284 24 0 68 294 FEM1B,CLN6
SE_02_087901044 chr15:68270673-68283412 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1044 2 310 30 0 70 294 FEM1B,CLN6
SE_02_154100654 chr15:68270683-68304078 Sample_02_1541 Nasopharyngeal HNE1 654 6 791 67 0 187 1353 ITGA11,FEM1B,CLN6
SE_02_046500879 chr15:68270696-68300304 Sample_02_0465 Adipose subcutaneous adipocytes 879 11 680 59 0 170 863 FEM1B,CLN6
SE_02_136400160 chr15:68270713-68282316 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 160 6 289 26 0 68 294 FEM1B,CLN6
SE_02_072700589 chr15:68270721-68282358 Sample_02_0727 Fetal lung IMR90_Etoposide 589 2 290 26 0 68 294 FEM1B,CLN6
SE_02_081800732 chr15:68270722-68282573 Sample_02_0818 Ovary High-grade serous ovarian cancer 732 5 295 29 0 68 294 FEM1B,CLN6
SE_02_144500069 chr15:68270743-68428613 Sample_02_1445 Adipose SW872_TAZ4SA 69 43 4780 227 16 459 4009 ITGA11,FEM1B,CLN6
SE_01_011000881 chr15:68270749-68283550 Sample_01_0110 Aorta thoracic aorta_37y 881 5 311 29 0 70 294 FEM1B,CLN6
SE_02_092900805 chr15:68270750-68298985 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 805 9 640 53 0 170 863 FEM1B,CLN6
SE_01_007700719 chr15:68270754-68300401 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 719 5 680 58 0 170 863 FEM1B,CLN6
SE_01_007800879 chr15:68270761-68282819 Sample_01_0078 Heart left ventricle heart-left-ventricle 879 2 298 28 0 69 294 FEM1B,CLN6
SE_01_006900764 chr15:68270773-68282823 Sample_01_0069 Adrenal gland adrenal-gland 764 3 298 28 0 69 294 FEM1B,CLN6
SE_02_093001222 chr15:68270787-68282338 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1222 7 288 25 0 68 294 FEM1B,CLN6
SE_02_072600531 chr15:68270811-68281961 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 531 3 279 23 0 68 294 FEM1B,CLN6
SE_02_026100654 chr15:68270829-68301080 Sample_02_0261 Osteoblastic hFOB_differentiated 654 3 690 60 0 170 863 FEM1B,CLN6
SE_02_142800071 chr15:68270831-68443294 Sample_02_1428 Shoulder fibroblast_316 71 56 5281 291 17 517 4151 ITGA11,FEM1B,CLN6
SE_02_142500719 chr15:68270835-68283738 Sample_02_1425 Shoulder fibroblast_384 719 5 311 29 0 70 294 FEM1B,CLN6
SE_02_140500238 chr15:68270866-68282392 Sample_02_1405 Embryonic kidney HEK293_siBAHD1_W667G_mutant 238 5 288 25 0 68 294 FEM1B,CLN6
SE_01_003700613 chr15:68270876-68280260 Sample_01_0037 Liver hepatocyte 613 2 227 19 0 67 294 FEM1B,CLN6
SE_02_079300423 chr15:68270901-68281851 Sample_02_0793 Brain MES20 423 3 275 23 0 68 294 FEM1B,CLN6
SE_02_089701021 chr15:68270901-68311058 Sample_02_0897 Heart left ventricle_LV1325 1021 16 1003 77 1 194 1556 ITGA11,FEM1B,CLN6
SE_02_130500482 chr15:68270910-68281894 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 482 7 276 23 0 68 294 FEM1B,CLN6
SE_02_085700782 chr15:68270913-68316546 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 782 6 1213 96 1 205 2004 ITGA11,FEM1B,CLN6
SE_02_140400176 chr15:68270914-68282542 Sample_02_1404 Embryonic kidney HEK293_siBAHD1_WT 176 3 293 28 0 68 294 FEM1B,CLN6
SE_02_090100743 chr15:68270938-68310818 Sample_02_0901 Heart left ventricle_LV1471 743 9 991 77 1 194 1510 ITGA11,FEM1B,CLN6
SE_02_096700921 chr15:68270939-68282362 Sample_02_0967 Brain H3.3K27M_JN57 921 4 286 25 0 68 294 FEM1B,CLN6
SE_02_089601138 chr15:68270972-68311150 Sample_02_0896 Heart left ventricle_LV1294 1138 12 1003 77 1 197 1567 ITGA11,FEM1B,CLN6
SE_02_017500360 chr15:68270997-68282403 Sample_02_0175 Lung IMR-90_Etoposide 360 4 285 25 0 68 294 FEM1B,CLN6
SE_02_032500641 chr15:68271022-68309882 Sample_02_0325 Liver hepatocytes_d1 641 7 962 77 1 194 1508 FEM1B,ITGA11,CLN6
SE_02_141000770 chr15:68271033-68307207 Sample_02_1410 Brain GSC6 770 10 884 73 1 188 1364 ITGA11,FEM1B,CLN6
SE_02_089400606 chr15:68271048-68300004 Sample_02_0894 Heart left ventricle_LV1248 606 9 669 57 0 170 863 FEM1B,CLN6
SE_02_120501029 chr15:68271057-68307277 Sample_02_1205 Brain NB3 1029 10 884 73 1 188 1379 ITGA11,FEM1B,CLN6
SE_02_070400410 chr15:68271065-68281625 Sample_02_0704 Pancreas HPAFII WT 410 8 259 21 0 68 294 FEM1B,CLN6
SE_01_011200187 chr15:68271070-68282220 Sample_01_0112 Embryonic kidney HEK293_encode 187 4 280 24 0 68 294 FEM1B,CLN6
SE_02_145201036 chr15:68271093-68282715 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1036 5 291 28 0 69 294 FEM1B,CLN6
SE_02_145400745 chr15:68271177-68282228 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 745 5 278 23 0 68 294 FEM1B,CLN6
SE_02_125901130 chr15:68271184-68282707 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 1130 3 289 27 0 69 294 FEM1B,CLN6
SE_02_060601091 chr15:68271235-68299734 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1091 4 657 55 0 170 863 FEM1B,CLN6,ITGA11
SE_02_064400247 chr15:68271264-68289077 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 247 7 445 39 0 74 348 FEM1B,CLN6
SE_01_008501236 chr15:68271279-68282945 Sample_01_0085 Stomach stomach 1236 1 292 27 0 69 294 FEM1B,CLN6
SE_02_086200506 chr15:68271291-68283224 Sample_02_0862 Malignant rhaboid tumor TTC1240_SMARCB1 FL 506 5 298 27 0 70 294 FEM1B,CLN6
SE_02_088800740 chr15:68271300-68310868 Sample_02_0888 Heart left ventricle_LV1160 740 10 987 76 1 194 1520 ITGA11,FEM1B,CLN6
SE_02_003200926 chr15:68271359-68282260 Sample_02_0032 Pancreas pancreatic-islets-M 926 3 276 24 0 68 294 FEM1B,CLN6
SE_02_132801195 chr15:68271403-68282379 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1195 4 278 24 0 68 294 FEM1B,CLN6
SE_02_036600493 chr15:68271478-68282685 Sample_02_0366 Skeletal muscle NCI0082 493 2 285 27 0 69 294 FEM1B,CLN6
SE_02_145500842 chr15:68271533-68281945 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 842 6 267 22 0 68 294 FEM1B,CLN6
SE_01_008200945 chr15:68271538-68301534 Sample_01_0082 Right lobe of liver right-lobe-of-liver 945 7 697 59 0 170 866 FEM1B,CLN6
SE_00_002100375 chr15:68271546-68282532 Sample_00_0021 Lung lung_3y 375 3 280 27 0 68 294 FEM1B,CLN6
SE_02_091100767 chr15:68271558-68300047 Sample_02_0911 Heart left ventricle_DCM_LV1290 767 11 661 56 0 170 863 FEM1B,CLN6
SE_02_010100189 chr15:68271564-68355031 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 189 10 2494 190 8 310 3452 FEM1B,ITGA11,CLN6
SE_00_004100723 chr15:68271580-68282398 Sample_00_0041 Stomach stomach_3y 723 2 276 24 0 68 294 FEM1B,CLN6
SE_02_004700904 chr15:68271611-68283761 Sample_02_0047 Pancreatic endoderm IIDP/donor790 904 4 299 28 0 70 294 FEM1B,CLN6
SE_00_003400513 chr15:68271629-68300087 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 513 6 662 56 0 170 863 FEM1B,CLN6
SE_02_116300066 chr15:68271651-68282683 Sample_02_1163 Embryonic kidney HEK293 no dox 66 2 282 27 0 69 294 FEM1B,CLN6
SE_02_089100969 chr15:68271673-68299716 Sample_02_0891 Heart left ventricle_LV1202 969 12 650 55 0 170 863 FEM1B,CLN6
SE_02_066500071 chr15:68271701-68281275 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 71 2 237 18 0 68 294 FEM1B,CLN6
SE_02_120200583 chr15:68271729-68282362 Sample_02_1202 Brain GBM38 583 4 274 24 0 68 294 FEM1B,CLN6
SE_02_003900965 chr15:68271733-68279502 Sample_02_0039 Embryo AFG 965 3 198 15 0 62 294 FEM1B,CLN6
SE_02_147101119 chr15:68271733-68282019 Sample_02_1471 Blood Outgrowth Endothelia BOEC 1119 3 266 22 0 68 294 FEM1B,CLN6
SE_02_095600610 chr15:68271748-68283358 Sample_02_0956 Brain IDH1_2658 610 2 290 27 0 70 294 FEM1B,CLN6
SE_00_005200375 chr15:68271752-68299705 Sample_00_0052 Heart left ventricle 3y 375 12 648 55 0 170 863 FEM1B,CLN6
SE_02_111400179 chr15:68271755-68282322 Sample_02_1114 Embryonic kidney HEK293 179 4 272 24 0 68 294 FEM1B,CLN6
SE_01_009800935 chr15:68271755-68311127 Sample_01_0098 Heart left ventricle_51y 935 9 990 76 1 197 1563 ITGA11,FEM1B,CLN6
SE_00_002200704 chr15:68271765-68279446 Sample_00_0022 Lung lung_30y 704 2 194 15 0 62 294 FEM1B,CLN6
SE_02_120000875 chr15:68271765-68282400 Sample_02_1200 Brain GBM36 875 3 273 24 0 68 294 FEM1B,CLN6
SE_02_117400985 chr15:68271773-68281341 Sample_02_1174 Brain GBM02 985 3 239 18 0 68 294 FEM1B,CLN6
SE_02_089201100 chr15:68271791-68311173 Sample_02_0892 Heart left ventricle_LV1215 1100 13 992 76 1 197 1570 ITGA11,FEM1B,CLN6
SE_02_091700809 chr15:68271792-68292329 Sample_02_0917 Heart left ventricle_DCM_LV1433 809 9 502 43 0 139 597 FEM1B,CLN6
SE_02_004600537 chr15:68271798-68279430 Sample_02_0046 Embryo endodermal CyT49_ES_D10 537 3 194 15 0 62 294 FEM1B,CLN6
SE_00_002900829 chr15:68271802-68279397 Sample_00_0029 Ovary ovary 829 2 194 15 0 62 294 FEM1B,CLN6
SE_02_119601037 chr15:68271802-68282323 Sample_02_1196 Brain GBM32 1037 5 272 24 0 68 294 FEM1B,CLN6
SE_02_145100606 chr15:68271804-68282106 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 606 4 267 22 0 68 294 FEM1B,CLN6
SE_02_074600838 chr15:68271804-68282302 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 838 3 272 24 0 68 294 FEM1B,CLN6
SE_02_092301029 chr15:68271807-68282325 Sample_02_0923 Heart fetal heart_PCW10_12522 1029 4 273 24 0 68 294 FEM1B,CLN6
SE_02_061301014 chr15:68271816-68282355 Sample_02_0613 Liposarcoma MLPS_T1 1014 6 273 24 0 68 294 FEM1B,CLN6
SE_00_003500762 chr15:68271820-68279411 Sample_00_0035 Sigmoid colon sigmoid-colon 762 3 194 15 0 62 294 FEM1B,CLN6
SE_02_090600959 chr15:68271822-68310699 Sample_02_0906 Heart left ventricle_DCM_LV1072 959 10 975 76 1 194 1508 ITGA11,FEM1B,CLN6
SE_00_000400478 chr15:68271850-68279049 Sample_00_0004 Aorta aorta 478 8 182 12 0 60 294 FEM1B,CLN6
SE_02_084900391 chr15:68271867-68281900 Sample_02_0849 iPSCs iPSC_CBP-30 391 2 261 22 0 68 294 FEM1B,CLN6
SE_00_005700405 chr15:68271875-68282243 Sample_00_0057 Heart right ventricle 3y 405 5 269 23 0 68 294 FEM1B,CLN6
SE_02_081601428 chr15:68271879-68282336 Sample_02_0816 Ovary Clear cell ovarian cancer 1428 3 272 24 0 68 294 FEM1B,CLN6
SE_02_119800659 chr15:68271886-68282336 Sample_02_1198 Brain GBM34 659 5 272 24 0 68 294 FEM1B,CLN6
SE_02_004800453 chr15:68271887-68279396 Sample_02_0048 Embryo endodermal CyT49_HE 453 3 193 15 0 62 294 FEM1B,CLN6
SE_02_035000631 chr15:68271901-68282356 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 631 3 272 24 0 68 294 FEM1B,CLN6
SE_02_119700988 chr15:68271930-68282229 Sample_02_1197 Brain GBM33 988 5 268 23 0 68 294 FEM1B,CLN6
SE_00_004600666 chr15:68271948-68311045 Sample_00_0046 Heart right ventricle_34y 666 6 987 76 1 194 1555 ITGA11,FEM1B,CLN6
SE_02_155400470 chr15:68271956-68312102 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 470 12 1024 79 1 199 1680 ITGA11,FEM1B,CLN6
SE_02_088901065 chr15:68271967-68311218 Sample_02_0889 Heart left ventricle_LV1183 1065 15 992 76 1 197 1585 ITGA11,FEM1B,CLN6
SE_02_092101173 chr15:68272012-68291015 Sample_02_0921 Heart embryonic heart_CS22 1173 8 478 39 0 115 512 FEM1B,CLN6
SE_02_090901223 chr15:68272062-68282400 Sample_02_0909 Heart left ventricle_DCM_LV1264 1223 6 271 24 0 65 294 FEM1B,CLN6
SE_02_047600572 chr15:68272216-68280396 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 572 4 207 18 0 61 294 FEM1B,CLN6
SE_02_108200954 chr15:68272252-68299736 Sample_02_1082 Retina retina 954 8 639 55 0 163 863 FEM1B,CLN6
SE_02_091400809 chr15:68272268-68300201 Sample_02_0914 Heart left ventricle_DCM_LV1342 809 9 649 56 0 163 863 FEM1B,CLN6
SE_02_149400572 chr15:68272286-68283186 Sample_02_1494 Other monocyte-derived dendritic cells_0h 572 6 279 27 0 62 294 FEM1B,CLN6
SE_02_065800147 chr15:68272319-68282384 Sample_02_0658 Tracheobronchial epithelial HTBE_H5N1_18h 147 4 263 24 0 61 294 FEM1B,CLN6
SE_02_108301162 chr15:68272361-68300140 Sample_02_1083 Macula macula 1162 9 648 56 0 163 863 FEM1B,CLN6
SE_00_002000774 chr15:68272857-68301428 Sample_00_0020 Large intestine large-intestine_108d 774 4 668 58 0 163 863 FEM1B,CLN6
SE_00_003601226 chr15:68273847-68281703 Sample_00_0036 Small intestine small-intestine_108days 1226 2 218 20 0 56 294 FEM1B,CLN6
SE_00_001400630 chr15:68274061-68301709 Sample_00_0014 Heart left ventricle heart-left-ventricle 630 3 659 58 0 159 898 FEM1B,ITGA11,CLN6
SE_02_004500359 chr15:68274194-68279179 Sample_02_0045 Embryo endodermal CyT49_ES_D7 359 2 140 12 0 48 294 FEM1B,CLN6
SE_02_004400528 chr15:68274719-68279000 Sample_02_0044 Embryo endodermal CyT49_ES_D5 528 2 115 6 0 47 294 FEM1B,CLN6
SE_02_156000561 chr15:68274770-68312298 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 561 10 964 73 1 186 1680 ITGA11,FEM1B,CLN6
SE_00_002600870 chr15:68276026-68279385 Sample_00_0026 Muscle of trunk muscle-of-trunk 870 1 95 8 0 37 294 FEM1B,CLN6
SE_00_003900975 chr15:68276152-68279647 Sample_00_0039 Spleen spleen_3y 975 1 101 8 0 37 294 FEM1B,CLN6
SE_01_008401597 chr15:68276258-68285543 Sample_01_0084 Spleen spleen 1597 2 242 23 0 45 294 FEM1B,CLN6
SE_00_004000778 chr15:68276349-68282305 Sample_00_0040 Spleen spleen_30y 778 2 169 17 0 43 294 FEM1B,CLN6
SE_02_023300754 chr15:68276501-68299969 Sample_02_0233 Tonsil Th1 754 6 554 49 0 145 863 FEM1B,CLN6
SE_02_122700762 chr15:68276739-68282388 Sample_02_1227 Bone marrow U266 762 1 163 17 0 42 294 FEM1B,CLN6
SE_02_146700556 chr15:68276791-68289467 Sample_02_1467 Blood HUDEP-2_LRFKO 556 1 332 32 0 48 376 FEM1B,CLN6
SE_02_055500188 chr15:68276817-68282574 Sample_02_0555 Other HAP1_WT 188 1 164 20 0 42 294 FEM1B,CLN6
SE_02_122400623 chr15:68276893-68311149 Sample_02_1224 Bone marrow normal plasma cell 623 20 874 69 1 171 1567 ITGA11,FEM1B,CLN6
SE_01_004800136 chr15:68277316-68305895 Sample_01_0048 Peripheral blood MM.1S 136 7 704 63 1 157 1357 FEM1B,ITGA11,CLN6
Genomic distribution of SEs associated with CLN6
Genome Browser

The strength of the tissue affected by the gene

Expression of CLN6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)