SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000561
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr15:68274770-68312298
Size: 37528
Super-enhancer rank 561
Number of SE elements: 10
ChIP density(Case|Control): 20456.5128|5096.3024
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FEM1B ;
ROSE Overlap ITGA11 ; FEM1B ;
ROSE Proximal CLN6 ;
ROSE Closest FEM1B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CALML4 ; CLN6 ; FEM1B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000561 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers