SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000139832
Gene: RAB20 Gene type: protein_coding
Strand: - External links:
Genomic region: chr13:110523066-110561722 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104600089 chr13:110402373-110597381 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 89 66 6629 624 29 258 4308 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_02_039601205 chr13:110404191-110527833 Sample_02_0396 Skin NHEK-D 1205 33 4371 364 19 243 4099 COL4A2,RAB20
SE_02_138500090 chr13:110404410-110541314 Sample_02_1385 Other iPSCs 90 40 4795 454 24 243 4099 COL4A2-AS1,COL4A2,RAB20
SE_02_001000191 chr13:110440908-110528650 Sample_02_0010 Kidney A-498_emptyvector 191 17 3236 314 12 170 3476 COL4A2,RAB20
SE_02_101700258 chr13:110447087-110536762 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 258 20 3273 351 12 161 3351 COL4A2-AS1,COL4A2,RAB20
SE_01_009300360 chr13:110463933-110562855 Sample_01_0093 Aorta ascending aorta 360 19 3419 377 16 147 3010 COL4A2-AS1,COL4A2,RAB20
SE_01_007300185 chr13:110471360-110563153 Sample_01_0073 Coronary artery coronary-artery 185 17 3144 341 14 141 2670 COL4A2,RAB20
SE_02_133200149 chr13:110471601-110541506 Sample_02_1332 Blood Monomac6_CTRL 149 18 2478 266 12 128 2461 COL4A2-AS1,COL4A2,RAB20
SE_02_046500365 chr13:110478891-110542047 Sample_02_0465 Adipose subcutaneous adipocytes 365 36 2182 241 13 107 2205 COL4A2-AS1,COL4A2,RAB20
SE_02_046601144 chr13:110478987-110541858 Sample_02_0466 Adipose visceral adipocytes 1144 31 2178 241 13 107 2205 COL4A2-AS1,COL4A2,RAB20
SE_01_011000375 chr13:110479282-110561730 Sample_01_0110 Aorta thoracic aorta_37y 375 19 2779 314 14 116 2346 COL4A2-AS1,COL4A2,RAB20
SE_02_035600090 chr13:110484103-110528560 Sample_02_0356 Colon Sw480 90 5 1592 140 6 100 2014 COL4A2,RAB20
SE_02_035800048 chr13:110484103-110530230 Sample_02_0358 Colon LS180 48 5 1633 151 6 100 2014 COL4A2,RAB20
SE_02_042300294 chr13:110485746-110531880 Sample_02_0423 Skin A375 294 12 1589 158 6 92 1845 COL4A2,RAB20
SE_02_132300101 chr13:110485838-110530077 Sample_02_1323 Colon DLD1_WT 101 7 1539 149 6 89 1813 COL4A2-AS1,COL4A2,RAB20
SE_02_138800552 chr13:110486827-110525078 Sample_02_1388 Peripheral blood JB6_ALK+ 552 5 1334 113 5 89 1784 COL4A2-AS1,COL4A2,RAB20
SE_02_092800358 chr13:110491987-110557537 Sample_02_0928 Peripheral blood neutrophils_Ecoli 358 15 2162 280 12 81 1596 COL4A2-AS1,COL4A2,RAB20
SE_02_127300104 chr13:110493299-110582200 Sample_02_1273 Cervix HeLa 104 22 2950 321 13 90 1669 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_02_003200327 chr13:110495890-110560328 Sample_02_0032 Pancreas pancreatic-islets-M 327 18 2129 276 10 72 1331 COL4A2,RAB20
SE_01_007800609 chr13:110496290-110563089 Sample_01_0078 Heart left ventricle heart-left-ventricle 609 9 2191 280 10 82 1540 COL4A2,RAB20
SE_01_008400533 chr13:110496405-110563201 Sample_01_0084 Spleen spleen 533 10 2194 280 10 83 1540 COL4A2,RAB20
SE_01_006900158 chr13:110496628-110563945 Sample_01_0069 Adrenal gland adrenal-gland 158 12 2209 281 10 83 1540 COL4A2,RAB20
SE_02_139200429 chr13:110496706-110538806 Sample_02_1392 Peripheral blood Mac-2A_ALK- 429 10 1455 186 6 68 1331 COL4A2-AS1,COL4A2,RAB20
SE_02_090900537 chr13:110497411-110561770 Sample_02_0909 Heart left ventricle_DCM_LV1264 537 12 2127 279 10 79 1484 COL4A2-AS1,COL4A2,RAB20
SE_00_005100151 chr13:110497776-110560235 Sample_00_0051 Adrenal gland adrenal gland 30y 151 51 2071 275 10 72 1331 COL4A2-AS1,COL4A2,RAB20
SE_02_035400021 chr13:110498747-110638271 Sample_02_0354 Colon Colo205 21 17 4700 570 21 115 2238 COL4A2,CARKD,RAB20
SE_02_042400021 chr13:110499357-110583819 Sample_02_0424 Colon SW620 21 6 2821 313 11 83 1540 COL4A2,RAB20,CARKD
SE_02_068400021 chr13:110500236-110561692 Sample_02_0684 Lung DMS79 21 29 2031 271 9 79 1464 COL4A2-AS1,COL4A2,RAB20
SE_02_008600127 chr13:110502744-110578161 Sample_02_0086 Pancreas CAPAN1 127 6 2482 297 9 81 1374 COL4A2,RAB20,CARKD
SE_02_024200498 chr13:110502792-110528826 Sample_02_0242 Colon V481 498 3 922 105 2 66 1154 COL4A2,RAB20
SE_01_007000439 chr13:110502795-110563181 Sample_01_0070 Ascending aorta ascending-aorta 439 9 1992 268 9 81 1363 COL4A2,RAB20
SE_02_025600665 chr13:110502849-110539212 Sample_02_0256 Peripheral blood MV411 665 7 1264 177 6 66 1145 COL4A2,RAB20
SE_01_008100536 chr13:110502881-110563074 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 536 7 1979 268 9 80 1349 COL4A2,RAB20
SE_02_088800404 chr13:110502882-110561736 Sample_02_0888 Heart left ventricle_LV1160 404 16 1945 268 9 77 1281 COL4A2-AS1,COL4A2,RAB20
SE_02_088900500 chr13:110502947-110562750 Sample_02_0889 Heart left ventricle_LV1183 500 8 1970 266 8 77 1346 COL4A2-AS1,COL4A2,RAB20
SE_02_090000531 chr13:110502963-110561748 Sample_02_0900 Heart left ventricle_LV1452 531 11 1942 266 8 77 1283 COL4A2-AS1,COL4A2,RAB20
SE_02_090800987 chr13:110502965-110561749 Sample_02_0908 Heart left ventricle_DCM_LV1262 987 16 1941 266 8 77 1283 COL4A2-AS1,COL4A2,RAB20
SE_02_090300553 chr13:110502992-110562576 Sample_02_0903 Heart left ventricle_DCM_LV1009 553 9 1963 266 8 77 1346 COL4A2-AS1,COL4A2,RAB20
SE_02_074701101 chr13:110502995-110559963 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 1101 17 1892 262 8 70 1137 COL4A2-AS1,COL4A2,RAB20
SE_01_009800410 chr13:110502995-110562579 Sample_01_0098 Heart left ventricle_51y 410 13 1963 266 8 77 1346 COL4A2-AS1,COL4A2,RAB20
SE_02_098700287 chr13:110503000-110537268 Sample_02_0987 Blood K562_Control_1 287 11 1197 157 2 66 1137 COL4A2-AS1,COL4A2,RAB20
SE_02_090200303 chr13:110503018-110561749 Sample_02_0902 Heart left ventricle_LV1558 303 13 1940 266 8 77 1281 COL4A2-AS1,COL4A2,RAB20
SE_02_089500582 chr13:110503021-110528864 Sample_02_0895 Heart left ventricle_LV1259 582 8 910 103 1 66 1134 COL4A2-AS1,COL4A2,RAB20
SE_02_089100292 chr13:110503032-110562706 Sample_02_0891 Heart left ventricle_LV1202 292 19 1968 266 8 77 1340 COL4A2-AS1,COL4A2,RAB20
SE_02_090700599 chr13:110503036-110561771 Sample_02_0907 Heart left ventricle_DCM_LV1223 599 15 1941 266 8 77 1283 COL4A2-AS1,COL4A2,RAB20
SE_02_133100483 chr13:110503048-110541489 Sample_02_1331 Blood Molm13_CTRL 483 11 1320 192 6 68 1129 COL4A2-AS1,COL4A2,RAB20
SE_00_004600347 chr13:110503062-110560293 Sample_00_0046 Heart right ventricle_34y 347 17 1896 262 8 70 1123 COL4A2-AS1,COL4A2,RAB20
SE_02_109900382 chr13:110503064-110539045 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 382 11 1251 173 4 66 1121 COL4A2-AS1,COL4A2,RAB20
SE_02_090400611 chr13:110503068-110562558 Sample_02_0904 Heart left ventricle_DCM_LV1028 611 16 1958 266 8 77 1328 COL4A2-AS1,COL4A2,RAB20
SE_02_091000514 chr13:110503076-110561768 Sample_02_0910 Heart left ventricle_DCM_LV1275 514 12 1939 266 8 77 1270 COL4A2-AS1,COL4A2,RAB20
SE_02_089200611 chr13:110503090-110561749 Sample_02_0892 Heart left ventricle_LV1215 611 10 1936 266 8 77 1262 COL4A2-AS1,COL4A2,RAB20
SE_02_089800333 chr13:110503094-110562693 Sample_02_0898 Heart left ventricle_LV1356 333 16 1963 266 8 77 1323 COL4A2-AS1,COL4A2,RAB20
SE_00_005200565 chr13:110503095-110560266 Sample_00_0052 Heart left ventricle 3y 565 15 1894 262 8 70 1114 COL4A2-AS1,COL4A2,RAB20
SE_02_089700459 chr13:110503099-110561726 Sample_02_0897 Heart left ventricle_LV1325 459 11 1933 266 8 77 1253 COL4A2-AS1,COL4A2,RAB20
SE_02_089300371 chr13:110503118-110561742 Sample_02_0893 Heart left ventricle_LV1226 371 10 1935 266 8 77 1249 COL4A2-AS1,COL4A2,RAB20
SE_02_090100490 chr13:110503129-110561756 Sample_02_0901 Heart left ventricle_LV1471 490 25 1935 266 8 77 1253 COL4A2-AS1,COL4A2,RAB20
SE_02_088700473 chr13:110503131-110561756 Sample_02_0887 Heart left ventricle_LV1121 473 8 1935 266 8 77 1252 COL4A2-AS1,COL4A2,RAB20
SE_02_091200518 chr13:110503136-110561728 Sample_02_0912 Heart left ventricle_DCM_LV1300 518 10 1932 266 8 77 1241 COL4A2-AS1,COL4A2,RAB20
SE_02_109800914 chr13:110503142-110537317 Sample_02_1098 Blood THP1_DMSO_noPMA 914 10 1193 157 2 66 1099 COL4A2-AS1,COL4A2,RAB20
SE_02_090500545 chr13:110503151-110561740 Sample_02_0905 Heart left ventricle_DCM_LV1033 545 12 1934 266 8 77 1241 COL4A2-AS1,COL4A2,RAB20
SE_02_091100402 chr13:110503159-110561747 Sample_02_0911 Heart left ventricle_DCM_LV1290 402 17 1934 266 8 77 1242 COL4A2-AS1,COL4A2,RAB20
SE_02_088400519 chr13:110503168-110531009 Sample_02_0884 Colon LoVo 519 5 955 118 1 65 1093 COL4A2-AS1,COL4A2,RAB20
SE_02_092100590 chr13:110503169-110560415 Sample_02_0921 Heart embryonic heart_CS22 590 18 1893 262 8 69 1093 COL4A2-AS1,COL4A2,RAB20
SE_02_089600498 chr13:110503211-110561732 Sample_02_0896 Heart left ventricle_LV1294 498 13 1931 266 8 76 1218 COL4A2-AS1,COL4A2,RAB20
SE_02_091300686 chr13:110503238-110561734 Sample_02_0913 Heart left ventricle_DCM_LV1304 686 14 1931 266 8 76 1209 COL4A2-AS1,COL4A2,RAB20
SE_02_089400345 chr13:110503239-110561708 Sample_02_0894 Heart left ventricle_LV1248 345 10 1928 266 8 75 1204 COL4A2-AS1,COL4A2,RAB20
SE_02_098900207 chr13:110503247-110565499 Sample_02_0989 Kidney kidney cortex_WT 207 21 2031 270 8 79 1273 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_01_008900549 chr13:110503252-110563382 Sample_01_0089 Transverse colon transverse-colon 549 8 1978 267 8 79 1271 COL4A2,RAB20
SE_02_024000094 chr13:110503258-110530278 Sample_02_0240 Colon V429_2 94 7 940 114 1 64 1062 COL4A2,RAB20
SE_02_091700679 chr13:110503259-110546319 Sample_02_0917 Heart left ventricle_DCM_LV1433 679 16 1445 209 8 66 1062 COL4A2-AS1,COL4A2,RAB20
SE_02_035300086 chr13:110503264-110532822 Sample_02_0353 Colon HT29 86 5 1016 127 1 64 1061 COL4A2,RAB20
SE_02_090600625 chr13:110503284-110561748 Sample_02_0906 Heart left ventricle_DCM_LV1072 625 15 1930 266 8 75 1202 COL4A2-AS1,COL4A2,RAB20
SE_02_089000392 chr13:110503292-110562588 Sample_02_0890 Heart left ventricle_LV1200 392 15 1952 266 8 75 1264 COL4A2-AS1,COL4A2,RAB20
SE_01_008800242 chr13:110503292-110563235 Sample_01_0088 Tibial nerve tibial-nerve 242 13 1975 267 8 79 1264 COL4A2,RAB20
SE_02_002100134 chr13:110503298-110529611 Sample_02_0021 Colon V429 134 4 925 111 1 64 1053 COL4A2,RAB20
SE_02_091800957 chr13:110503309-110547380 Sample_02_0918 Heart left ventricle_DCM_LV1437 957 11 1488 214 8 66 1050 COL4A2-AS1,COL4A2,RAB20
SE_00_005700423 chr13:110503405-110546904 Sample_00_0057 Heart right ventricle 3y 423 16 1461 210 8 66 1026 COL4A2-AS1,COL4A2,RAB20
SE_02_091900361 chr13:110503424-110561719 Sample_02_0919 Heart left ventricle_DCM_LV1532 361 17 1924 265 8 75 1155 COL4A2-AS1,COL4A2,RAB20
SE_02_092000422 chr13:110503444-110561743 Sample_02_0920 Heart left ventricle_DCM_LV1535 422 14 1924 265 8 73 1158 COL4A2-AS1,COL4A2,RAB20
SE_02_092300643 chr13:110503445-110542878 Sample_02_0923 Heart fetal heart_PCW10_12522 643 11 1337 197 7 64 1013 COL4A2-AS1,COL4A2,RAB20
SE_02_078000314 chr13:110503535-110564722 Sample_02_0780 Liver SMMC-7721 314 20 2003 268 8 73 1198 COL4A2-AS1,COL4A2,RAB20
SE_02_105100024 chr13:110503563-110576855 Sample_02_1051 Esophagus Eso26 24 20 2394 290 8 73 1191 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_02_024100288 chr13:110503602-110528247 Sample_02_0241 Colon V456 288 7 884 99 1 58 977 COL4A2,RAB20
SE_02_047700114 chr13:110503629-110577782 Sample_02_0477 Colon intestinal epithelial organoids_139a 114 24 2426 291 8 73 1179 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_02_089900810 chr13:110503690-110560598 Sample_02_0899 Heart left ventricle_LV1400 810 12 1876 259 8 63 964 COL4A2-AS1,COL4A2,RAB20
SE_02_047800123 chr13:110503724-110577476 Sample_02_0478 Colon normal colon mucosa 123 24 2405 288 8 73 1168 COL4A2-AS1,COL4A2,RAB20,CARKD
SE_02_127800133 chr13:110503797-110563648 Sample_02_1278 Chordoma UCH1_DMSO_48h 133 11 1963 264 8 73 1161 COL4A2-AS1,COL4A2,RAB20
SE_02_019900200 chr13:110503987-110530464 Sample_02_0199 Stomach KATO3 200 9 907 110 1 55 880 COL4A2,RAB20
SE_02_023700347 chr13:110504099-110563214 Sample_02_0237 Colon V389 347 10 1930 261 8 69 1060 COL4A2,RAB20
SE_02_019300200 chr13:110505167-110543420 Sample_02_0193 Kidney Patient_x750N 200 4 1256 192 7 51 775 COL4A2,RAB20
SE_01_008500091 chr13:110505351-110631903 Sample_01_0085 Stomach stomach 91 12 4122 503 17 83 1333 COL4A2,CARKD,RAB20
SE_02_092200578 chr13:110505389-110561686 Sample_02_0922 Heart fetal heart_PCW10_12434 578 12 1798 259 8 59 907 COL4A2-AS1,COL4A2,RAB20
SE_00_003400533 chr13:110505427-110530200 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 533 5 812 107 1 49 775 COL4A2,RAB20
SE_00_002000817 chr13:110505515-110529199 Sample_00_0020 Large intestine large-intestine_108d 817 5 781 101 1 49 775 COL4A2,RAB20
SE_02_070300223 chr13:110505531-110563872 Sample_02_0703 Pancreas PATU8988S WT 223 11 1859 261 8 64 984 COL4A2-AS1,COL4A2,RAB20
SE_00_004200089 chr13:110505559-110591298 Sample_00_0042 Stomach stomach_30y 89 14 2765 317 9 64 984 COL4A2,RAB20,CARKD
SE_02_025700094 chr13:110505584-110582529 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 94 15 2512 294 9 64 984 COL4A2,RAB20,CARKD
SE_01_008600473 chr13:110505708-110563286 Sample_01_0086 Thoracic aorta thoracic-aorta 473 7 1842 260 8 64 984 COL4A2,RAB20
SE_02_125800921 chr13:110505790-110531124 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 921 3 824 114 1 48 775 COL4A2-AS1,COL4A2,RAB20
SE_01_010100141 chr13:110505880-110563136 Sample_01_0101 Pancreas pancreas_54y 141 22 1827 258 8 63 984 COL4A2-AS1,COL4A2,RAB20
SE_00_001400159 chr13:110506005-110564186 Sample_00_0014 Heart left ventricle heart-left-ventricle 159 6 1854 260 8 63 984 COL4A2,RAB20
SE_02_023600416 chr13:110506037-110527884 Sample_02_0236 Colon V206 416 9 736 92 1 48 775 COL4A2,RAB20
SE_00_002100522 chr13:110506059-110562597 Sample_00_0021 Lung lung_3y 522 9 1807 258 8 59 984 COL4A2,RAB20
SE_00_003600884 chr13:110506131-110530247 Sample_00_0036 Small intestine small-intestine_108days 884 5 789 106 1 48 775 COL4A2,RAB20
SE_01_008200079 chr13:110506148-110577073 Sample_01_0082 Right lobe of liver right-lobe-of-liver 79 10 2261 283 8 63 984 COL4A2,RAB20,CARKD
SE_00_002200252 chr13:110506158-110560368 Sample_00_0022 Lung lung_30y 252 12 1737 254 8 52 775 COL4A2,RAB20
SE_00_004900238 chr13:110506172-110528406 Sample_00_0049 Small intestine small intestine 30y 238 9 743 94 1 48 775 COL4A2-AS1,COL4A2,RAB20,CARKD,ING1
SE_01_007900113 chr13:110506182-110578109 Sample_01_0079 Peyers patch Peyers-patch 113 13 2301 287 8 63 984 COL4A2,RAB20,CARKD
SE_01_007100080 chr13:110506225-110562357 Sample_01_0071 Pancreas body-of-pancreas 80 12 1792 258 8 59 983 COL4A2,RAB20
SE_02_092400640 chr13:110506256-110560216 Sample_02_0924 Heart fetal heart_PCW10_12569 640 13 1728 254 8 52 770 COL4A2-AS1,COL4A2,RAB20
SE_00_004100270 chr13:110506260-110562430 Sample_00_0041 Stomach stomach_3y 270 9 1793 258 8 59 978 COL4A2,RAB20
SE_02_032700349 chr13:110506350-110577173 Sample_02_0327 Liver hepatocytes_d6 349 7 2252 283 8 63 964 COL4A2,RAB20,CARKD
SE_02_019600172 chr13:110506369-110528395 Sample_02_0196 Stomach NCC59 172 3 736 94 1 48 753 COL4A2,RAB20
SE_02_032600426 chr13:110506418-110577107 Sample_02_0326 Liver hepatocytes_d3 426 7 2249 283 8 63 953 COL4A2,RAB20,CARKD
SE_00_003500201 chr13:110506744-110560430 Sample_00_0035 Sigmoid colon sigmoid-colon 201 9 1712 253 8 47 664 COL4A2,RAB20
SE_02_034200421 chr13:110509260-110539156 Sample_02_0342 Liver HSPCs_F0 421 10 992 163 5 33 484 COL4A2,RAB20
SE_02_149200424 chr13:110509327-110563983 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 424 18 1739 256 8 48 693 RAB20,COL4A2,COL4A2-AS1
SE_02_087500377 chr13:110509368-110575926 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 377 16 2113 278 8 48 693 RAB20,COL4A2,CARKD,COL4A2-AS1,ING1
SE_02_128700089 chr13:110509712-110576547 Sample_02_1287 Lung NCI-H510_p8-15 89 28 2125 279 8 48 693 RAB20,COL4A2,CARKD,COL4A2-AS1
SE_02_157300067 chr13:110509882-110563080 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 67 16 1697 253 8 47 693 RAB20,COL4A2,COL4A2-AS1
SE_02_131500248 chr13:110510524-110560217 Sample_02_1315 Brain hMGLs_INPP5D SNP 248 15 1597 248 8 37 484 RAB20,COL4A2,COL4A2-AS1
SE_02_082700503 chr13:110510760-110538549 Sample_02_0827 Stomach normal gastric 503 6 931 156 4 33 484 RAB20,COL4A2,COL4A2-AS1
SE_02_074800398 chr13:110516041-110565428 Sample_02_0748 Mammary gland HCC1599_WO 398 8 1544 238 7 30 453 RAB20,COL4A2-AS1
SE_00_005600532 chr13:110517536-110560362 Sample_00_0056 Sigmoid colon sigmoid colon 3y 532 33 1361 224 7 19 244 RAB20,COL4A2-AS1
SE_01_010900651 chr13:110518104-110562931 Sample_01_0109 Colon transverse colon_54y 651 11 1415 226 7 26 453 RAB20,COL4A2-AS1
SE_02_119100252 chr13:110518117-110574572 Sample_02_1191 Brain GBM25 252 18 1781 250 7 30 453 RAB20,CARKD,COL4A2-AS1
SE_02_118500367 chr13:110518137-110563036 Sample_02_1185 Brain GBM14 367 11 1417 226 7 29 453 RAB20,COL4A2-AS1
SE_02_053400600 chr13:110518157-110549271 Sample_02_0534 Blood vessel Circle of Willis_60y 600 14 1003 179 7 17 244 RAB20,COL4A2-AS1
SE_02_093001485 chr13:110518429-110559538 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1485 26 1307 220 7 17 244 RAB20,COL4A2-AS1
SE_02_119500405 chr13:110518580-110560626 Sample_02_1195 Brain GBM29 405 15 1331 221 7 20 244 RAB20,COL4A2-AS1
SE_02_006800583 chr13:110518650-110531126 Sample_02_0068 Skin A375_DMSO 583 4 397 80 0 15 244 RAB20
SE_02_010300546 chr13:110519115-110537948 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 546 4 636 124 3 15 244 RAB20
SE_02_010100597 chr13:110519183-110542260 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 597 2 738 150 6 17 244 RAB20
SE_02_119700990 chr13:110519356-110538103 Sample_02_1197 Brain GBM33 990 10 631 125 3 15 244 RAB20,COL4A2-AS1
SE_02_081600651 chr13:110519453-110562981 Sample_02_0816 Ovary Clear cell ovarian cancer 651 16 1366 222 7 26 453 RAB20,COL4A2-AS1
SE_02_119200662 chr13:110519511-110560180 Sample_02_1192 Brain GBM26 662 17 1286 218 7 19 244 RAB20,COL4A2-AS1
SE_02_058600353 chr13:110519715-110563164 Sample_02_0586 Chordal patient-derived chordoma MGH_4 353 14 1362 222 7 30 453 RAB20,COL4A2-AS1
SE_02_061300796 chr13:110519723-110560281 Sample_02_0613 Liposarcoma MLPS_T1 796 15 1280 218 7 19 244 RAB20,COL4A2-AS1
SE_02_074900715 chr13:110519739-110566119 Sample_02_0749 Mammary gland HCC1599_GSI 715 9 1440 228 7 30 453 RAB20,CARKD,COL4A2-AS1
SE_02_117500284 chr13:110519857-110538952 Sample_02_1175 Brain GBM03 284 11 629 129 3 15 244 RAB20,COL4A2-AS1
SE_02_103500919 chr13:110519890-110564341 Sample_02_1035 Mammary gland HCC70_Vehicle 919 19 1391 224 7 30 453 RAB20,COL4A2-AS1
SE_02_103602045 chr13:110519987-110559013 Sample_02_1036 Mammary gland HCC70_XY018 2045 20 1234 217 7 17 244 RAB20,COL4A2-AS1
SE_00_000400397 chr13:110520130-110541091 Sample_00_0004 Aorta aorta 397 7 683 143 4 15 244 RAB20
SE_02_149400417 chr13:110520165-110538604 Sample_02_1494 Other monocyte-derived dendritic cells_0h 417 13 613 127 3 15 244 RAB20,COL4A2-AS1
SE_01_010600173 chr13:110520201-110561701 Sample_01_0106 Adrenal gland adrenal gland 54y 173 6 1305 222 7 26 377 RAB20,COL4A2-AS1
SE_01_010300137 chr13:110520263-110563038 Sample_01_0103 Pancreas pancreas_37y 137 22 1339 222 7 29 453 RAB20,COL4A2-AS1
SE_02_093700832 chr13:110520325-110543419 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 832 5 733 155 6 17 244 RAB20,COL4A2-AS1
SE_01_010500793 chr13:110520340-110543463 Sample_01_0105 Thyroid gland thyroid gland_54y 793 6 733 155 6 17 244 RAB20,COL4A2-AS1
SE_02_131600507 chr13:110520429-110541450 Sample_02_1316 Brain hMGLs_TREM2-R47H 507 9 682 147 5 17 244 RAB20,COL4A2-AS1
SE_02_131700286 chr13:110520439-110539054 Sample_02_1317 Brain hMGLs_SORL1-KO 286 9 613 128 3 15 244 RAB20,COL4A2-AS1
SE_02_131200569 chr13:110520460-110538594 Sample_02_1312 Brain hMGLs_WT 569 10 602 126 3 15 244 RAB20,COL4A2-AS1
SE_02_131800497 chr13:110520517-110538725 Sample_02_1318 Brain hMGLs_SORL1-A528T 497 7 603 127 3 15 244 RAB20,COL4A2-AS1
SE_02_082600566 chr13:110520537-110596585 Sample_02_0826 Stomach gastric tumor 566 24 2438 307 10 30 453 RAB20,CARKD,COL4A2-AS1
SE_00_005800284 chr13:110520541-110560362 Sample_00_0058 Stomach stomach 34y 284 15 1256 217 7 19 244 RAB20,COL4A2-AS1
SE_01_010800048 chr13:110520619-110561680 Sample_01_0108 Adrenal gland adrenal gland_37y 48 16 1291 220 7 25 374 RAB20,COL4A2-AS1
SE_02_018500213 chr13:110520711-110561740 Sample_02_0185 Skin UACC257 213 6 1293 219 7 25 388 RAB20
SE_02_131300598 chr13:110520735-110540828 Sample_02_1313 Brain hMGLs_CD33_SNP 598 9 656 140 4 14 244 RAB20,COL4A2-AS1
SE_02_071100411 chr13:110520743-110561723 Sample_02_0711 Pancreas hN35_organoid 411 13 1288 219 7 25 384 RAB20,COL4A2-AS1
SE_02_131400511 chr13:110520803-110538538 Sample_02_1314 Brain hMGLs_TREM2-KO 511 12 590 124 3 14 244 RAB20,COL4A2-AS1
SE_02_067200201 chr13:110521111-110581947 Sample_02_0672 Endometrium endometrium cancer_DSG 201 27 1967 252 8 29 453 RAB20,CARKD,COL4A2-AS1
SE_02_067400173 chr13:110521124-110581441 Sample_02_0674 Endometrium E1_FA 173 22 1954 250 8 29 453 RAB20,CARKD,COL4A2-AS1
SE_02_077001379 chr13:110524015-110565320 Sample_02_0770 Ovary OVCA429_shLuc 1379 23 1292 202 7 21 279 RAB20,COL4A2-AS1
SE_02_123400456 chr13:110524155-110560312 Sample_02_1234 Mammary gland T47D_Full 456 12 1151 193 7 4 40 RAB20,COL4A2-AS1
SE_02_040300364 chr13:110524241-110565736 Sample_02_0403 Mammary gland T-47D_untreat 364 7 1295 202 7 15 232 RAB20,CARKD
SE_02_109200411 chr13:110524311-110563776 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 411 10 1247 198 7 15 220 RAB20,COL4A2-AS1
SE_02_142100053 chr13:110524328-110531217 Sample_02_1421 Brain NHA 53 2 219 52 0 0 10 RAB20,COL4A2-AS1
SE_02_108700283 chr13:110524380-110563811 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 283 12 1244 197 7 15 209 RAB20,COL4A2-AS1
SE_02_080900200 chr13:110524387-110563827 Sample_02_0809 Mammary gland T47D Serum 200 7 1243 197 7 15 209 RAB20,COL4A2-AS1
SE_02_151400270 chr13:110524434-110561166 Sample_02_1514 Lung Differentiated AT1-like cells 270 7 1160 193 7 5 0 RAB20,COL4A2-AS1
SE_02_109300459 chr13:110524518-110561766 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 459 17 1181 193 7 11 152 RAB20,COL4A2-AS1
SE_02_146500227 chr13:110524599-110561164 Sample_02_1465 Ovary CAOV4cis 227 9 1160 193 7 5 0 RAB20,COL4A2-AS1
SE_02_040600523 chr13:110526041-110530289 Sample_02_0406 Mammary gland ZR-75-30_parental 523 4 120 22 0 0 0 RAB20
SE_00_005300141 chr13:110526930-110568059 Sample_00_0053 Embryo trophoblast cell originated from H1 141 12 1272 176 7 15 209 RAB20,CARKD,COL4A2-AS1
SE_02_053200254 chr13:110526988-110561226 Sample_02_0532 Mammary gland T47D 254 12 1062 170 7 5 11 RAB20,COL4A2-AS1
SE_00_002900875 chr13:110527352-110560316 Sample_00_0029 Ovary ovary 875 7 1025 165 7 4 0 RAB20
SE_02_004300381 chr13:110529247-110550987 Sample_02_0043 Embryo endodermal CyT49_ES_D2 381 3 690 118 7 2 0 RAB20
SE_02_075200685 chr13:110529588-110552068 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 685 4 709 127 7 2 0 RAB20,COL4A2-AS1
SE_02_075501462 chr13:110529708-110551655 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1462 4 696 123 7 2 0 RAB20,COL4A2-AS1
SE_02_003801659 chr13:110538600-110551885 Sample_02_0038 Embryo DE 1659 3 394 65 4 2 0 RAB20
SE_01_006800027 chr13:110540795-110563143 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 27 3 674 79 3 15 209 RAB20
SE_02_151300921 chr13:110541144-110561198 Sample_02_1513 Lung Transitional AT2->1 cells 921 3 608 78 2 5 3 RAB20,COL4A2-AS1
SE_02_035300337 chr13:110546275-110577927 Sample_02_0353 Colon HT29 337 5 999 86 0 13 209 RAB20,CARKD
SE_02_108800502 chr13:110546367-110563310 Sample_02_1088 Mammary gland T47D_shCtrl_45min 502 8 530 58 0 13 209 RAB20,COL4A2-AS1
SE_02_108600605 chr13:110546672-110561753 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 605 8 475 57 0 9 149 RAB20,COL4A2-AS1
SE_02_109000476 chr13:110547161-110563846 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 476 8 514 55 0 13 209 RAB20,COL4A2-AS1
SE_02_071000893 chr13:110547233-110561728 Sample_02_0710 Pancreas hN34_organoid 893 4 447 52 0 9 141 RAB20,COL4A2-AS1
SE_02_109100521 chr13:110547286-110561764 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 521 7 448 52 0 9 151 RAB20,COL4A2-AS1
SE_02_036100371 chr13:110554194-110581994 Sample_02_0361 Colon HT29_DMSO 371 4 914 52 1 13 209 RAB20,CARKD
SE_02_081900247 chr13:110554887-110566374 Sample_02_0819 Ovary Mucinous ovarian cancer 247 1 343 25 0 13 209 RAB20,CARKD,COL4A2-AS1
Genomic distribution of SEs associated with RAB20
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB20

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)