SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082600566
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: gastric tumor
Genomic region: chr13:110520537-110596585
Size: 76048
Super-enhancer rank 566
Number of SE elements: 24
ChIP density(Case|Control): 28335.4848|10251.2704
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAB20;
ROSE Overlap RAB20;
ROSE Proximal CARKD; COL4A2-AS1;
ROSE Closest RAB20;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082600566 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers