SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_127800133
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Chordoma
Biosample name: UCH1_DMSO_48h
Genomic region: chr13:110503797-110563648
Size: 59851
Super-enhancer rank 133
Number of SE elements: 11
ChIP density(Case|Control): 59773.1937|3644.9259
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COL4A2-AS1;
ROSE Overlap COL4A2-AS1; COL4A2; RAB20;
ROSE Proximal ;
ROSE Closest COL4A2-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127800133 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers