Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_053200084 chr1:107624675-107704211 79536 84 34 2096 86 19 352 251 VAV3
SE_02_053200243 chr1:109718145-109739877 21732 243 7 499 60 3 27 712 GSTM3,GSTM5,EPS8L3,GSTM1
SE_02_053200265 chr1:146179544-146226922 47378 265 19 102 3 0 245 116 NOTCH2NL,NBPF10
SE_02_053200211 chr1:148626959-148680404 53445 211 26 0 10 0 0 0 NBPF14
SE_02_053200192 chr1:149389925-149441202 51277 192 29 0 32 0 0 0 PPIAL4C,LINC00869
SE_02_053200131 chr1:150560176-150579153 18977 131 9 498 46 3 69 682 ADAMTSL4,MCL1,ADAMTSL4-AS1,FALEC,ENSA,MIR4257
SE_02_053200359 chr1:150968827-150981258 12431 359 7 269 37 2 35 324 CERS2,SETDB1,ANXA9,PRUNE,FAM63A
SE_02_053200174 chr1:151970120-151992451 22331 174 5 551 88 0 67 119 S100A10,NBPF18P,S100A11
SE_02_053200190 chr1:152033700-152049203 15503 190 4 319 35 0 34 310 S100A11,LOC100131107,TCHHL1,NBPF18P,S100A10
SE_02_053200138 chr1:154180064-154200887 20823 138 9 469 29 3 124 576 TPM3,C1ORF189,MIR190B,UBAP2L,NUP210L,C1ORF43
SE_02_053200147 chr1:154999694-155017406 17712 147 8 369 19 1 572 1336 ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1
SE_02_053200108 chr1:156102828-156130257 27429 108 15 666 64 4 206 594 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_053200086 chr1:156689276-156725806 36530 86 13 1050 60 0 96 833 ISG20L2,CRABP2,HDGF,BCAN,NES,RRNAD1,PRCC,MRPL24
SE_02_053200025 chr1:164557316-164662184 104868 25 39 2631 21 11 864 628 PBX1
SE_02_053200343 chr1:183262698-183282810 20112 343 9 544 23 1 66 191 NMNAT2
SE_02_053200137 chr1:200351983-200417317 65334 137 18 1523 106 4 417 796 ZNF281,LINC00862
SE_02_053200246 chr1:214213578-214221207 7629 246 3 220 13 0 13 0 SMYD2
SE_02_053200149 chr1:214624729-214685916 61187 149 23 1774 85 5 194 1036 CENPF
SE_02_053200006 chr1:215084207-215283861 199654 6 78 4875 238 7 253 449 KCNK2
SE_02_053200051 chr1:215393366-215431697 38331 51 16 1117 22 1 33 0 KCTD3
SE_02_053200010 chr1:215450024-215543492 93468 10 39 2428 21 2 58 0 KCTD3
SE_02_053200050 chr1:215567730-215624807 57077 50 30 1374 7 0 99 771 USH2A,KCTD3
SE_02_053200060 chr1:22428455-22500596 72141 60 24 1753 94 5 160 357 ZBTB40
SE_02_053200053 chr1:224386267-224458041 71774 53 27 1664 142 2 283 1274 WDR26,MIR4742,CNIH4
SE_02_053200325 chr1:233105271-233115302 10031 325 6 240 13 0 0 48 PCNXL2,NTPCR
SE_02_053200091 chr1:234598658-234620667 22009 91 9 601 41 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_053200181 chr1:234957749-234966266 8517 181 5 264 14 2 49 222 LOC101927851
SE_02_053200346 chr1:235061259-235083747 22488 346 6 117 29 0 11 0 LINC01348,SNORA14B,TOMM20
SE_02_053200233 chr1:23954491-23984545 30054 233 12 99 53 3 273 1174 SRSF10,PNRC2,MIR378F,CNR2
SE_02_053200069 chr1:31896978-31940465 43487 69 16 1158 63 5 0 700 PTP4A2
SE_02_053200266 chr1:40897398-40945598 48200 266 16 1477 136 2 77 0 CTPS1,CITED4
SE_02_053200301 chr1:41858554-41892781 34227 301 15 913 83 7 66 0 HIVEP3
SE_02_053200380 chr1:51313750-51332629 18879 380 5 484 34 0 59 622 TTC39A-AS1,TTC39A
SE_02_053200289 chr1:64981031-65004779 23748 289 9 600 29 1 27 285 LINC01359,JAK1
SE_02_053200230 chr1:65041940-65074734 32794 230 17 840 62 2 105 98 MIR3671,MIR101-1,LINC01359
SE_02_053200183 chr10:101041684-101067961 26277 183 7 648 29 0 141 1207 KAZALD1,LZTS2,SFXN3,PDZD7
SE_02_053200134 chr10:110864530-110896720 32190 134 18 781 46 1 91 853 PDCD4,PDCD4-AS1,SHOC2,BBIP1,RPL13AP6,MIR4680
SE_02_053200063 chr10:27495241-27559584 64343 63 23 1623 129 0 70 655 RAB18
SE_02_053200032 chr10:28241662-28304258 62596 32 25 1688 218 14 50 319 MPP7,MIR8086
SE_02_053200208 chr10:40365969-40488984 123015 208 34 0 0 0 0 0
SE_02_053200337 chr10:40541944-40617410 75466 337 21 0 0 0 0 0
SE_02_053200238 chr10:40752758-40863514 110756 238 27 0 0 0 0 0
SE_02_053200275 chr10:41109509-41218714 109205 275 26 0 0 0 0 0
SE_02_053200361 chr10:41460534-41539824 79290 361 25 0 6 0 0 0 LOC441666
SE_02_053200377 chr10:43394763-43407164 12401 377 6 363 42 0 42 375 HNRNPF,ZNF487,FXYD4
SE_02_053200164 chr10:44161547-44183743 22196 164 5 675 21 6 28 0 C10ORF142
SE_02_053200111 chr10:58065758-58111486 45728 111 24 1265 133 8 26 0 IPMK
SE_02_053200321 chr10:60130216-60149011 18795 321 5 504 12 5 71 250 ANK3
SE_02_053200341 chr10:61924116-61951442 27326 341 13 739 18 8 141 67 ARID5B
SE_02_053200180 chr10:62076922-62113422 36500 180 14 945 27 8 282 818 ARID5B
SE_02_053200365 chr10:6355148-6366718 11570 365 5 318 14 4 1 0 LOC399715
SE_02_053200194 chr10:77844766-77899774 55008 194 16 1540 144 1 118 881 DLG5,DLG5-AS1
SE_02_053200264 chr10:79070964-79102163 31199 264 10 927 51 15 142 0 ZMIZ1,ZMIZ1-AS1
SE_02_053200017 chr10:8045352-8076253 30901 17 9 970 38 25 339 1693 GATA3-AS1,GATA3
SE_02_053200038 chr10:80939671-81019289 79618 38 29 2203 68 9 90 0 SH2D4B
SE_02_053200357 chr10:88949246-88976161 26915 357 7 639 31 2 0 564 ACTA2,FAS,ACTA2-AS1,FAS-AS1
SE_02_053200354 chr10:8948016-8987977 39961 354 16 1090 34 8 136 0 LOC105755953
SE_02_053200027 chr10:9018639-9123080 104441 27 46 2910 81 51 231 0 LOC105755953
SE_02_053200014 chr10:9137244-9243990 106746 14 25 2890 1 7 320 0 LOC101928272,LINC00709
SE_02_053200026 chr10:93432152-93482709 50557 26 19 1459 196 7 127 229 MYOF,CEP55
SE_02_053200226 chr10_KI270825v1_alt:83980-128895 44915 226 16 0 0 0 0 0 DLG5
SE_02_053200018 chr11:101021861-101127315 105454 18 72 2763 238 10 132 1054 PGR,LOC101054525,TMEM133
SE_02_053200009 chr11:101290887-101414805 123918 9 43 3681 34 19 117 0 MIR3920
SE_02_053200078 chr11:101427984-101456783 28799 78 7 775 7 2 52 231 TRPC6,MIR3920
SE_02_053200031 chr11:102613237-102667323 54086 31 23 1785 201 6 42 132 MMP20,MMP27
SE_02_053200106 chr11:106156450-106206015 49565 106 16 1374 135 8 0 0 LOC101928535
SE_02_053200312 chr11:10859900-10902804 42904 312 22 1150 99 7 88 377 ZBED5-AS1,ZBED5
SE_02_053200136 chr11:118912670-118930238 17568 136 16 411 33 2 271 0 MIR4492,CXCR5,BCL9L,UPK2,FOXR1
SE_02_053200035 chr11:120626146-120659282 33136 35 12 1058 33 11 87 75 GRIK4
SE_02_053200348 chr11:121456417-121489108 32691 348 9 926 19 0 172 212 SORL1
SE_02_053200240 chr11:123059780-123072964 13184 240 5 457 47 3 71 468 HSPA8,CLMP,SNORD14E,LOC341056,SNORD14C,SNORD14D
SE_02_053200045 chr11:129140729-129293752 153023 45 50 3802 308 3 326 155 ARHGAP32
SE_02_053200082 chr11:129313620-129326245 12625 82 5 354 6 0 70 0 BARX2
SE_02_053200019 chr11:34619485-34672574 53089 19 18 1425 93 7 317 1007 EHF
SE_02_053200195 chr11:48028857-48056616 27759 195 10 702 51 4 97 0 PTPRJ,MIR3161
SE_02_053200102 chr11:57761861-57801490 39629 102 17 879 59 2 266 470 CTNND1,TMX2-CTNND1,BTBD18,TMX2,C11ORF31,MED19
SE_02_053200079 chr11:61149338-61166122 16784 79 9 451 67 24 34 132 VPS37C,PGA3,CD5
SE_02_053200247 chr11:61687602-61699799 12197 247 10 313 26 9 79 0 DAGLA
SE_02_053200179 chr11:62498919-62513284 14365 179 9 340 24 0 55 0 AHNAK
SE_02_053200186 chr11:62539129-62557029 17900 186 11 418 30 1 184 185 AHNAK,EEF1G,TUT1,MTA2,MIR6747
SE_02_053200200 chr11:63555958-63584013 28055 200 12 684 33 1 14 361 HRASLS2,PLA2G16,RARRES3,LGALS12
SE_02_053200081 chr11:63840375-63878174 37799 81 21 1020 74 1 120 0 MARK2,RCOR2,C11ORF84
SE_02_053200061 chr11:65418492-65442257 23765 61 19 608 28 1 40 2260 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_053200012 chr11:65471263-65516806 45543 12 17 1245 120 4 50 1018 MALAT1,SCYL1,LTBP3,NEAT1,MIR612
SE_02_053200234 chr11:67241298-67270612 29314 234 11 625 36 0 206 1491 KDM2A,ADRBK1,ANKRD13D,SSH3,LOC100130987
SE_02_053200177 chr11:72026442-72050763 24321 177 13 588 68 2 88 271 NUMA1,IL18BP,LOC100128494,LRTOMT,MIR3165
SE_02_053200318 chr11:73192565-73201793 9228 318 3 255 25 1 27 0 P2RY2
SE_02_053200368 chr11:73272249-73284684 12435 368 3 294 24 1 14 69 P2RY6,ARHGEF17
SE_02_053200324 chr11:7572000-7614276 42276 324 12 1264 116 5 188 518 PPFIBP2
SE_02_053200286 chr11:78286159-78315313 29154 286 14 809 72 15 61 0 GAB2
SE_02_053200307 chr11:83709517-83729885 20368 307 7 575 18 0 58 0 DLG2
SE_02_053200303 chr11:90635122-90671456 36334 303 21 1098 71 2 18 0 DISC1FP1,MIR4490
SE_02_053200112 chr11:90801700-90858020 56320 112 34 1691 30 6 26 74 DISC1FP1,MIR1261
SE_02_053200269 chr11:90888286-90917076 28790 269 18 766 16 1 5 0 DISC1FP1,MIR1261
SE_02_053200224 chr12:104275998-104319002 43004 224 11 1131 102 2 52 724 TXNRD1,EID3
SE_02_053200002 chr12:115956161-116305445 349284 2 188 7893 84 10 267 2202 MED13L,MIR620
SE_02_053200281 chr12:116388262-116407520 19258 281 6 545 3 3 0 0 MIR4472-2
SE_02_053200223 chr12:116493086-116506996 13910 223 9 399 27 0 1 0 LINC00173
SE_02_053200349 chr12:118269769-118302391 32622 349 8 730 60 1 7 0 TAOK3
SE_02_053200088 chr12:124910087-124940437 30350 88 12 1117 37 4 71 1108 MIR5188,UBC,SCARB1,DHX37
SE_02_053200375 chr12:14879755-14907046 27291 375 13 770 55 1 48 307 MGP,ERP27,ART4
SE_02_053200044 chr12:15107967-15164299 56332 44 25 1379 136 4 114 199 RERG,RERG-AS1
SE_02_053200159 chr12:15180945-15227218 46273 159 11 1103 58 6 138 182 RERG,RERG-AS1
SE_02_053200279 chr12:31748607-31780989 32382 279 7 924 90 0 0 0 H3F3C,AMN1
SE_02_053200277 chr12:45259932-45304286 44354 277 16 1130 42 4 0 147 ANO6,PLEKHA8P1
SE_02_053200146 chr12:50567947-50598531 30584 146 13 722 90 0 23 0 DIP2B
SE_02_053200260 chr12:50612893-50637930 25037 260 8 597 43 0 24 59 DIP2B
SE_02_053200244 chr12:52235425-52249158 13733 244 8 393 33 2 54 785 KRT7,KRT80,LINC00592,C12ORF80,KRT81
SE_02_053200165 chr12:52885163-52908253 23090 165 12 704 80 2 74 971 KRT8,KRT18,KRT78
SE_02_053200262 chr12:52967277-52980485 13208 262 8 396 45 1 20 0 KRT18,EIF4B,KRT8
SE_02_053200378 chr12:56672981-56688119 15138 378 9 499 38 0 16 222 PTGES3,NACA,BAZ2A,ATP5B,SNORD59B,SNORD59A
SE_02_053200376 chr12:58890629-58920078 29449 376 10 837 19 1 146 210 LRIG3
SE_02_053200144 chr12:68781213-68813217 32004 144 7 816 61 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_053200239 chr12:722642-755346 32704 239 9 876 44 0 79 451 WNK1
SE_02_053200257 chr12:75698701-75726393 27692 257 12 815 21 2 66 0 KRR1
SE_02_053200245 chr12:89448318-89475470 27152 245 10 634 55 2 90 252 POC1B,GALNT4
SE_02_053200351 chr12:91414069-91435866 21797 351 9 527 20 1 61 0 DCN
SE_02_053200168 chr12:93133418-93168629 35211 168 16 901 14 1 72 0 LOC643339,LOC102724933
SE_02_053200254 chr13:110526988-110561226 34238 254 12 1062 170 7 5 11 RAB20,COL4A2-AS1
SE_02_053200283 chr13:33207825-33230832 23007 283 19 623 55 1 72 0 STARD13,STARD13-AS
SE_02_053200126 chr14:100012059-100074356 62297 126 21 1712 125 2 59 170 EVL,MIR342,MIR151B
SE_02_053200152 chr14:105014346-105043963 29617 152 11 693 123 0 6 128 CDCA4,C14ORF79,AHNAK2,GPR132
SE_02_053200237 chr14:105466013-105482853 16840 237 6 557 28 0 116 2351 MTA1,CRIP2,C14ORF80,CRIP1,TMEM121,LOC100507437
SE_02_053200309 chr14:35320611-35353929 33318 309 8 1064 128 0 42 0 PSMA6
SE_02_053200122 chr14:37402456-37448336 45880 122 19 1087 44 6 114 26 MIPOL1,FOXA1
SE_02_053200008 chr14:37512158-37624211 112053 8 55 2557 150 35 554 1373 TTC6,MIPOL1,FOXA1
SE_02_053200373 chr14:49893600-49912173 18573 373 4 444 19 1 97 355 ARF6,NEMF,RN7SL2
SE_02_053200092 chr14:49949646-49976806 27160 92 8 714 39 2 45 126 MIR6076,LINC01588
SE_02_053200267 chr14:49989917-50004704 14787 267 5 420 30 0 32 375 LINC01588,MIR6076
SE_02_053200364 chr14:54647329-54677587 30258 364 10 825 12 1 117 0 SAMD4A
SE_02_053200041 chr14:68137595-68197143 59548 41 25 1433 42 20 358 0 RAD51B
SE_02_053200292 chr14:73526017-73545835 19818 292 10 378 43 0 61 581 ACOT1,HEATR4,ACOT2,C14ORF169,ACOT4
SE_02_053200163 chr14:73592439-73614726 22287 163 9 609 109 3 32 232 ACOT4,ACOT2,HEATR4,DNAL1,ACOT6
SE_02_053200304 chr14:75829657-75855583 25926 304 7 608 52 0 89 0 TTLL5,TGFB3
SE_02_053200182 chr14:77006187-77035045 28858 182 13 884 69 8 310 971 IRF2BPL,LOC283575,LOC102724190
SE_02_053200293 chr14:77572700-77599238 26538 293 6 731 98 0 35 119 SPTLC2
SE_02_053200294 chr14:91114373-91128970 14597 294 4 404 46 3 14 212 C14ORF159,SNORA11B
SE_02_053200118 chr14:94313141-94342309 29168 118 11 818 67 5 22 246 SERPINA6,SERPINA10,SERPINA1,SERPINA2
SE_02_053200080 chr14:94386704-94421946 35242 80 12 1120 87 13 22 290 SERPINA1,SERPINA11,SERPINA2
SE_02_053200119 chr14_KI270847v1_alt:1429329-1456830 27501 119 13 0 0 0 0 0 SERPINA6
SE_02_053200326 chr15:33007850-33037702 29852 326 14 1267 164 0 38 25 FMN1
SE_02_053200220 chr15:33054614-33084058 29444 220 8 1090 95 3 72 344 FMN1
SE_02_053200120 chr15:39581242-39624172 42930 120 19 1088 70 2 0 1587 FSIP1,THBS1
SE_02_053200098 chr15:39639105-39686740 47635 98 12 1225 89 0 67 0 FSIP1,THBS1
SE_02_053200379 chr15:40766275-40803922 37647 379 9 1010 95 0 142 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_053200099 chr15:63365347-63403563 38216 99 12 1053 70 7 61 162 CA12,LOC102723344
SE_02_053200046 chr15:71068496-71114330 45834 46 16 1141 35 0 62 315 CT62,THSD4
SE_02_053200057 chr15:92797404-92845513 48109 57 16 1478 47 0 52 0 LINC01578,ASB9P1
SE_02_053200158 chr15:98712028-98763862 51834 158 14 1638 45 40 230 0 IGF1R,MIR4714
SE_02_053200094 chr15:98841063-98878387 37324 94 18 1084 19 2 178 0 IGF1R,MIR4714
SE_02_053200021 chr16:34571637-34595697 24060 21 10 0 2 0 0 0 LINC00273
SE_02_053200007 chr16:46380683-46401638 20955 7 12 543 0 0 0 0 ANKRD26P1,SHCBP1
SE_02_053200327 chr16:48236135-48256928 20793 327 13 556 65 0 35 333 LONP2,ABCC11
SE_02_053200282 chr16:53768013-53809240 41227 282 13 1024 90 83 96 0 FTO
SE_02_053200248 chr16:54067933-54098581 30648 248 13 838 35 4 221 0 FTO,FTO-IT1,LOC100996338
SE_02_053200252 chr16:54921030-54937394 16364 252 8 398 16 0 354 1100 CRNDE,IRX5
SE_02_053200132 chr16:84093862-84116496 22634 132 15 847 84 2 46 235 MBTPS1,DNAAF1,HSDL1
SE_02_053200222 chr16:84723553-84760594 37041 222 11 1564 121 11 38 412 USP10
SE_02_053200071 chr16:85459502-85475317 15815 71 12 602 17 1 33 0 GSE1
SE_02_053200125 chr16:85545468-85574943 29475 125 12 1051 14 0 218 0 GSE1
SE_02_053200291 chr17:17689923-17725580 35657 291 16 978 68 1 142 121 RAI1,SMCR2,RAI1-AS1
SE_02_053200340 chr17:31069118-31076125 7007 340 2 146 12 0 10 0 MIR4733,NF1
SE_02_053200274 chr17:40111963-40136670 24707 274 5 567 45 0 302 1260 MSL1,THRA,RAPGEFL1,NR1D1,MIR6866,CASC3
SE_02_053200048 chr17:40300871-40332910 32039 48 23 711 40 0 531 746 RARA,CDC6,RARA-AS1,GJD3
SE_02_053200287 chr17:40576302-40619907 43605 287 10 1152 83 4 42 0 CCR7,KRT222,SMARCE1
SE_02_053200036 chr17:41521062-41549854 28792 36 13 850 67 3 102 784 LINC00974,KRT19,MIR6510,KRT35,KRT36,KRT15,KRT9,KRT13,KRT14
SE_02_053200229 chr17:43359148-43370448 11300 229 5 479 81 3 0 95 LINC00910,ARL4D
SE_02_053200127 chr17:50700687-50765660 64973 127 12 1645 126 3 229 1383 ANKRD40,LUC7L3,LINC00483,MIR8059
SE_02_053200058 chr17:50829155-50864653 35498 58 9 1076 75 3 279 1207 TOB1,WFIKKN2,TOB1-AS1
SE_02_053200185 chr17:50902502-50921037 18535 185 11 540 34 1 61 0 TOB1-AS1,TOB1
SE_02_053200214 chr17:50935653-50954243 18590 214 6 535 71 0 64 0 TOB1
SE_02_053200352 chr17:56160648-56177087 16439 352 8 387 9 0 62 0 ANKFN1
SE_02_053200064 chr17:57889695-57905642 15947 64 8 423 27 0 118 149 CUEDC1,MRPS23
SE_02_053200037 chr17:57918711-57954692 35981 37 19 915 50 3 105 0 CUEDC1,VEZF1
SE_02_053200100 chr17:57972220-58015262 43042 100 15 1075 57 0 529 2049 SRSF1,VEZF1,CUEDC1
SE_02_053200116 chr17:59836014-59870023 34009 116 12 847 78 3 111 463 TUBD1,MIR21,VMP1,RPS6KB1
SE_02_053200235 chr17:68437148-68464364 27216 235 8 659 68 3 78 353 WIPI1,PRKAR1A,MIR635
SE_02_053200193 chr17:73289896-73310676 20780 193 10 645 35 2 43 0 CDC42EP4,CPSF4L
SE_02_053200369 chr17:74379720-74396932 17212 369 7 561 24 2 23 0 GPRC5C,GPR142,BTBD17
SE_02_053200296 chr17:74426804-74454724 27920 296 6 862 62 1 174 1538 GPRC5C,CD300A
SE_02_053200047 chr17:74744904-74774348 29444 47 14 878 50 5 160 2088 RAB37,NAT9,SLC9A3R1,MIR3615,TMEM104,CD300LF
SE_02_053200300 chr17:82099964-82110896 10932 300 9 427 51 1 0 173 CCDC57,GPS1,DUS1L,RFNG,FASN
SE_02_053200314 chr18:14451295-14472695 21400 314 11 626 45 0 0 0 CXADRP3,ANKRD20A5P
SE_02_053200062 chr18:14780843-14815495 34652 62 13 1062 33 0 0 415 ANKRD30B,MIR3156-2
SE_02_053200250 chr18:59004226-59027850 23624 250 15 666 32 5 28 0 OACYLP
SE_02_053200241 chr19:1162005-1183931 21926 241 12 772 42 0 48 158 SBNO2,STK11
SE_02_053200207 chr19:16442436-16470452 28016 207 14 832 65 1 3 0 EPS15L1,CALR3,C19ORF44
SE_02_053200356 chr19:39150286-39168257 17971 356 13 584 43 0 22 39 PAK4,SYCN,NCCRP1
SE_02_053200335 chr19:40417290-40446654 29364 335 6 809 80 1 142 884 SERTAD1,SERTAD3,SPTBN4,PRX,MIR6796,BLVRB,HIPK4
SE_02_053200065 chr19:46861570-46935717 74147 65 39 1856 56 0 250 474 ARHGAP35,SNAR-E,AP2S1
SE_02_053200342 chr19:47094967-47125334 30367 342 10 875 24 1 167 324 ZC3H4,TMEM160,SAE1
SE_02_053200142 chr19:4970981-5002227 31246 142 17 1101 90 2 3 0 KDM4B,MIR4747
SE_02_053200090 chr19:57792392-57824553 32161 90 16 906 110 1 0 775 ZNF552,ZNF586,ZNF587,ZNF587B,FKBP1AP1,ZNF776
SE_02_053200205 chr2:100054618-100084536 29918 205 15 718 46 4 138 0 AFF3
SE_02_053200259 chr2:105371616-105406360 34744 259 9 1005 83 1 95 819 FHL2,TGFBRAP1,C2ORF49
SE_02_053200129 chr2:11478151-11513013 34862 129 19 949 36 0 56 0 GREB1,MIR4429,E2F6
SE_02_053200066 chr2:11529659-11561206 31547 66 13 957 14 2 43 421 MIR4429,GREB1
SE_02_053200336 chr2:129943350-129982689 39339 336 15 1127 122 2 0 674 RAB6C,LOC101927924,RAB6C-AS1,LOC389033
SE_02_053200196 chr2:142856618-142880413 23795 196 14 573 44 0 27 52 KYNU
SE_02_053200085 chr2:143329144-143366352 37208 85 18 955 8 6 330 0 ARHGAP15,KYNU
SE_02_053200227 chr2:189465679-189501265 35586 227 13 953 94 1 76 339 WDR75
SE_02_053200039 chr2:189518212-189583042 64830 39 32 1628 95 4 197 756 SLC40A1
SE_02_053200034 chr2:211372163-211478766 106603 34 48 2908 7 7 512 983 ERBB4,CPS1-IT1
SE_02_053200236 chr2:213249940-213273913 23973 236 18 623 58 15 52 0 LOC100130451,SPAG16
SE_02_053200153 chr2:215965671-216023209 57538 153 22 1587 89 6 99 215 MREG
SE_02_053200334 chr2:220075859-220104795 28936 334 12 786 54 0 250 0 MIR4268,SLC4A3
SE_02_053200251 chr2:237482094-237513632 31538 251 8 1099 126 1 26 539 MLPH,MIR6811
SE_02_053200362 chr2:74187636-74213252 25616 362 11 698 55 2 36 523 MTHFD2,BOLA3-AS1,BOLA3,MOB1A
SE_02_053200167 chr2:99654898-99689845 34947 167 14 922 69 2 100 36 AFF3,REV1
SE_02_053200202 chr2:99706219-99730543 24324 202 7 634 43 2 49 41 AFF3,REV1
SE_02_053200329 chr20:16735456-16765022 29566 329 9 894 28 2 97 441 OTOR,SNRPB2
SE_02_053200049 chr20:17533812-17611451 77639 49 30 2020 93 5 140 838 DSTN,BFSP1
SE_02_053200317 chr20:19750819-19785479 34660 317 12 902 37 6 42 0 RIN2
SE_02_053200216 chr20:20438850-20466319 27469 216 8 636 13 2 214 0 RALGAPA2,INSM1
SE_02_053200139 chr20:20547691-20594133 46442 139 21 1082 53 4 291 278 RALGAPA2
SE_02_053200059 chr20:31662513-31719437 56924 59 24 1273 91 9 237 525 BCL2L1,TPX2,ABALON,COX4I2
SE_02_053200313 chr20:33717855-33735560 17705 313 3 456 22 0 30 239 PXMP4,ZNF341,E2F1,NECAB3
SE_02_053200107 chr20:348605-383985 35380 107 11 1160 118 4 40 999 TRIB3,NRSN2,RBCK1,SOX12,NRSN2-AS1
SE_02_053200172 chr20:35762152-35793737 31585 172 11 805 107 0 58 201 PHF20,RBM39
SE_02_053200109 chr20:44164448-44190295 25847 109 9 688 99 10 86 678 JPH2,OSER1-AS1,OSER1
SE_02_053200268 chr20:47314844-47334579 19735 268 5 528 2 0 29 420 ZMYND8,LOC100131496
SE_02_053200128 chr20:47350555-47360683 10128 128 4 212 2 2 120 681 ZMYND8,LOC100131496
SE_02_053200176 chr20:48809074-48827709 18635 176 8 507 35 1 48 63 PREX1
SE_02_053200011 chr20:50722382-50765287 42905 11 22 1151 101 4 143 595 PARD6B,BCAS4,FAM65C
SE_02_053200367 chr20:50790048-50825133 35085 367 8 997 105 1 42 241 BCAS4
SE_02_053200104 chr20:53578550-53598034 19484 104 7 466 5 1 126 455 ZNF217,LOC101927770
SE_02_053200306 chr20:53642460-53660916 18456 306 5 493 13 1 43 0 ZNF217
SE_02_053200114 chr20:53735570-53791181 55611 114 16 1629 5 7 53 0 SUMO1P1
SE_02_053200166 chr20:53851689-53873193 21504 166 7 628 3 0 33 0 SUMO1P1
SE_02_053200299 chr20:59917953-59930649 12696 299 6 317 7 0 19 103 SYCP2,FAM217B,PPP1R3D,CDH26
SE_02_053200169 chr21:16416360-16457925 41565 169 13 1262 12 9 166 0 MIR99AHG,MIR99A
SE_02_053200023 chr21:20998476-21124699 126223 23 52 3946 62 4 224 43 NCAM2
SE_02_053200173 chr21:29377271-29396379 19108 173 8 481 31 2 33 0 BACH1-IT2
SE_02_053200030 chr21:40310594-40352324 41730 30 15 1222 4 5 21 299 DSCAM,DSCAM-AS1
SE_02_053200143 chr21:40378996-40388951 9955 143 4 322 0 3 9 269 DSCAM-AS1,DSCAM
SE_02_053200024 chr22:28783002-28830289 47287 24 21 1164 133 3 126 902 XBP1,CCDC117,CHEK2,HSCB
SE_02_053200217 chr3:133428114-133462425 34311 217 16 1015 23 3 53 448 BFSP2
SE_02_053200103 chr3:150747240-150770652 23412 103 7 598 54 2 91 362 SIAH2,LOC101928105,ERICH6-AS1,ERICH6
SE_02_053200042 chr3:174434380-174497701 63321 42 24 1509 5 3 87 140 NAALADL2
SE_02_053200212 chr3:174856517-174876776 20259 212 6 588 6 0 73 86 NAALADL2
SE_02_053200148 chr3:176847814-176869685 21871 148 10 619 14 2 26 0 LINC01209
SE_02_053200067 chr3:176893826-176955128 61302 67 20 1816 87 11 130 0 LINC01209
SE_02_053200097 chr3:177019453-177127117 107664 97 38 2936 105 7 204 725 TBL1XR1
SE_02_053200285 chr3:177193787-177199664 5877 285 2 154 8 0 29 287 TBL1XR1
SE_02_053200087 chr3:177594500-177636808 42308 87 19 1096 61 12 75 32 LINC00578
SE_02_053200322 chr3:179436674-179465343 28669 322 4 738 59 2 47 153 GNB4
SE_02_053200338 chr3:179811437-179829606 18169 338 6 433 23 1 23 139 PEX5L,PEX5L-AS2
SE_02_053200040 chr3:18344906-18444015 99109 40 37 2426 61 10 1332 1278 SATB1,SATB1-AS1
SE_02_053200255 chr3:18837061-18848453 11392 255 4 289 0 1 73 0 KCNH8
SE_02_053200350 chr3:189096142-189109189 13047 350 8 311 3 1 54 0 TPRG1
SE_02_053200218 chr3:189291911-189326031 34120 218 18 924 16 4 153 320 TPRG1,TPRG1-AS2
SE_02_053200188 chr3:189748062-189812832 64770 188 14 1734 12 9 219 159 TP63,MIR944
SE_02_053200124 chr3:190301827-190370098 68271 124 27 2163 244 3 176 525 CLDN1,CLDN16
SE_02_053200156 chr3:192590952-192616862 25910 156 6 719 0 8 52 0 FGF12
SE_02_053200184 chr3:192879035-192916518 37483 184 14 1170 96 5 94 0 MB21D2
SE_02_053200121 chr3:196136257-196151132 14875 121 5 482 38 4 5 394 LINC00885
SE_02_053200371 chr3:196740306-196755426 15120 371 5 467 74 2 16 3 PAK2,CEP19,PIGX,RNU6-42P
SE_02_053200141 chr3:196774283-196793868 19585 141 9 652 64 0 16 47 RNU6-42P,PAK2
SE_02_053200161 chr3:4711139-4722545 11406 161 5 403 7 0 62 93 ITPR1,EGOT
SE_02_053200320 chr3:4744133-4787058 42925 320 12 1436 34 11 232 867 ITPR1,EGOT
SE_02_053200076 chr3:4847504-4898670 51166 76 18 1595 34 2 151 268 BHLHE40-AS1,ITPR1
SE_02_053200297 chr3:4975690-4985804 10114 297 6 266 8 3 222 671 BHLHE40-AS1,BHLHE40
SE_02_053200083 chr3:66408416-66499710 91294 83 31 2904 169 10 469 412 LRIG1
SE_02_053200189 chr4:105550460-105589165 38705 189 8 1089 93 3 107 215 ARHGEF38-IT1,ARHGEF38
SE_02_053200020 chr4:115625720-115687118 61398 20 30 1777 0 3 76 0 NDST4
SE_02_053200328 chr4:138896796-138916816 20020 328 6 523 15 4 42 0 NOCT
SE_02_053200054 chr4:37449663-37501299 51636 54 19 1345 127 1 85 334 C4ORF19
SE_02_053200249 chr4:40188856-40202846 13990 249 5 476 31 1 32 106 RHOH
SE_02_053200311 chr4:40439165-40481041 41876 311 18 1067 20 6 60 54 RBM47,MIR4802
SE_02_053200263 chr4:6747245-6780791 33546 263 14 1209 23 0 35 0 BLOC1S4,KIAA0232,MRFAP1L1
SE_02_053200197 chr5:112878576-112930272 51696 197 14 1552 213 4 54 703 SRP19,REEP5,DCP2
SE_02_053200113 chr5:112955925-113011209 55284 113 22 1865 191 6 84 491 DCP2,REEP5
SE_02_053200198 chr5:118004866-118026107 21241 198 8 588 5 0 62 0 LOC102467224,HNCAT21
SE_02_053200133 chr5:139636846-139676016 39170 133 19 866 44 1 532 202 CXXC5
SE_02_053200201 chr5:150487969-150513065 25096 201 6 721 44 0 76 220 NDST1,RPS14,LOC102546298
SE_02_053200171 chr5:155067873-155092900 25027 171 8 728 31 3 61 0 KIF4B
SE_02_053200219 chr5:168315626-168367695 52069 219 18 1440 57 8 111 0 WWC1
SE_02_053200093 chr5:173292221-173332471 40250 93 14 1158 13 4 201 1329 STC2,MIR8056
SE_02_053200155 chr5:173470344-173515652 45308 155 13 1228 65 3 40 0 LOC285593
SE_02_053200358 chr5:173561353-173573105 11752 358 5 318 27 6 16 0 LOC285593,BOD1
SE_02_053200360 chr5:173866398-173903391 36993 360 6 883 60 6 273 465 CPEB4
SE_02_053200003 chr5:35052677-35320624 267947 3 125 7430 351 31 512 1482 PRLR,AGXT2
SE_02_053200298 chr5:35338011-35373655 35644 298 9 1021 51 3 53 0 PRLR
SE_02_053200074 chr5:35436400-35484630 48230 74 13 1338 98 2 40 0 SPEF2
SE_02_053200029 chr5:42572761-42657225 84464 29 41 2132 150 1 213 52 GHR
SE_02_053200096 chr5:43385885-43447936 62051 96 20 1587 193 9 43 412 CCL28,C5ORF28
SE_02_053200372 chr5:55957481-55994795 37314 372 13 976 56 1 52 295 IL6ST,FLJ31104
SE_02_053200033 chr5:56386433-56476961 90528 33 31 2490 153 18 215 0 LOC102467147
SE_02_053200056 chr5:56812267-56900936 88669 56 42 2307 242 22 347 1340 MAP3K1,SETD9
SE_02_053200276 chr5:58179714-58192136 12422 276 3 341 3 7 14 0 LOC101928569
SE_02_053200323 chr5:58441070-58462651 21581 323 4 624 49 2 129 653 PLK2,GAPT
SE_02_053200344 chr5:68531325-68549284 17959 344 5 474 16 0 97 0 PIK3R1
SE_02_053200204 chr5:80466180-80494482 28302 204 12 653 63 0 44 369 ZFYVE16,FAM151B
SE_02_053200374 chr6:10140119-10166516 26397 374 13 731 29 6 119 44 TFAP2A-AS1
SE_02_053200068 chr6:10399603-10430214 30611 68 10 777 24 1 347 1570 TFAP2A,TFAP2A-AS1,LINC00518,MIR5689
SE_02_053200013 chr6:12267795-12355801 88006 13 26 2427 107 7 246 586 EDN1
SE_02_053200355 chr6:12409093-12421515 12422 355 6 292 4 0 29 0 EDN1
SE_02_053200213 chr6:12480276-12505771 25495 213 10 699 2 3 54 0 EDN1
SE_02_053200140 chr6:12709492-12733223 23731 140 5 609 9 2 113 181 PHACTR1
SE_02_053200101 chr6:12812203-12853385 41182 101 17 1058 60 5 80 0 PHACTR1
SE_02_053200295 chr6:149054388-149088557 34169 295 17 892 67 2 120 395 UST,LOC100128176,TAB2
SE_02_053200016 chr6:151613486-151716397 102911 16 38 2873 124 73 170 589 CCDC170,ESR1
SE_02_053200288 chr6:16985590-17015274 29684 288 13 851 31 1 90 0 STMND1
SE_02_053200072 chr6:17386550-17423525 36975 72 20 1054 115 4 0 232 CAP2
SE_02_053200191 chr6:26047421-26068867 21446 191 4 621 50 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A
SE_02_053200339 chr6:27891048-27903814 12766 339 7 390 36 7 33 316 HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B
SE_02_053200150 chr6:34531515-34555014 23499 150 16 731 58 2 97 1628 PACSIN1,SPDEF
SE_02_053200258 chr6:42214989-42230390 15401 258 9 452 73 6 43 506 MRPS10,TRERF1,GUCA1B
SE_02_053200151 chr6:53282031-53340624 58593 151 20 1562 185 2 50 689 ELOVL5,RPS16P5,MIR5685
SE_02_053200199 chr6:7129956-7148455 18499 199 11 468 10 5 127 0 RREB1
SE_02_053200370 chr6:7519364-7554838 35474 370 15 972 88 3 106 271 DSP,SNRNP48
SE_02_053200278 chr6:96171493-96202275 30782 278 16 860 73 2 27 0 FUT9,UFL1
SE_02_053200253 chr7:110381637-110408810 27173 253 15 714 19 7 42 0 EIF3IP1,LRRN3
SE_02_053200353 chr7:128431576-128459431 27855 353 13 669 107 1 21 357 HILPDA,METTL2B,IMPDH1
SE_02_053200305 chr7:140300699-140326363 25664 305 9 678 28 2 22 0 SLC37A3
SE_02_053200089 chr7:143117396-143153500 36104 89 15 942 75 4 8 292 PIP,TAS2R39
SE_02_053200308 chr7:14632926-14642666 9740 308 8 286 1 0 37 0 DGKB,ETV1
SE_02_053200157 chr7:16770894-16815144 44250 157 22 1386 171 12 130 620 AGR2,TSPAN13
SE_02_053200290 chr7:16843690-16861403 17713 290 5 627 72 4 31 73 AGR3,AGR2
SE_02_053200070 chr7:16875598-16929579 53981 70 23 1784 88 7 39 53 AGR3
SE_02_053200178 chr7:26183961-26213207 29246 178 11 1217 54 0 234 1320 HNRNPA2B1,CBX3,NFE2L3
SE_02_053200242 chr7:26793009-26806877 13868 242 6 420 54 0 8 0 SKAP2
SE_02_053200228 chr7:30285843-30351510 65667 228 11 1745 90 0 65 108 MIR550A1,ZNRF2,MIR550B1,LINC01176,DKFZP586I1420
SE_02_053200022 chr7:34020247-34075742 55495 22 19 1363 47 9 242 249 BMPER
SE_02_053200232 chr7:36390530-36448777 58247 232 15 1454 143 4 105 728 ANLN,KIAA0895
SE_02_053200215 chr7:47576876-47607367 30491 215 9 930 37 0 65 143 TNS3,LINC01447,C7ORF65
SE_02_053200117 chr7:5411563-5430189 18626 117 12 565 3 0 264 908 TNRC18
SE_02_053200135 chr7:70709728-70752650 42922 135 27 1312 32 11 82 0 AUTS2,WBSCR17
SE_02_053200225 chr7:73739312-73747833 8521 225 4 213 23 0 26 0 ABHD11,MIR4284,STX1A,ABHD11-AS1,CLDN3
SE_02_053200273 chr7:73822877-73834070 11193 273 5 285 42 1 38 947 CLDN4,WBSCR27,WBSCR28
SE_02_053200221 chr7:76281026-76319687 38661 221 13 1266 130 2 134 2078 SRRM3,HSPB1,YWHAG
SE_02_053200284 chr7:7970461-8005015 34554 284 15 1039 59 2 119 40 GLCCI1,LOC100505921
SE_02_053200332 chr7:80807005-80870246 63241 332 14 1761 33 7 127 126 SEMA3C
SE_02_053200280 chr7:80916681-80926205 9524 280 4 275 4 0 56 201 SEMA3C
SE_02_053200123 chr7:93893253-93927669 34416 123 11 1029 74 3 75 415 GNGT1,GNG11,TFPI2
SE_02_053200187 chr8:101359392-101392744 33352 187 11 911 35 2 23 316 NACAP1
SE_02_053200005 chr8:101423630-101635706 212076 5 91 5897 122 20 388 725 GRHL2
SE_02_053200001 chr8:115406913-115714517 307604 1 189 7220 137 16 2218 1325 TRPS1
SE_02_053200004 chr8:115759467-115904581 145114 4 43 3442 89 11 620 0 TRPS1
SE_02_053200154 chr8:115927652-115943748 16096 154 5 344 8 0 83 0 TRPS1
SE_02_053200175 chr8:115961138-115999365 38227 175 17 943 23 1 167 194 LINC00536,TRPS1
SE_02_053200206 chr8:116078207-116121280 43073 206 17 1000 27 1 174 55 LINC00536
SE_02_053200110 chr8:11712144-11747234 35090 110 11 1201 104 4 133 0 GATA4,FDFT1,C8ORF49,NEIL2
SE_02_053200302 chr8:123528464-123548363 19899 302 8 551 33 3 116 350 FBXO32
SE_02_053200345 chr8:124463139-124492659 29520 345 7 730 70 1 119 1018 RNF139,RNF139-AS1,TATDN1,MIR6844,TRMT12,NDUFB9
SE_02_053200261 chr8:127799181-127820432 21251 261 12 567 21 2 13 0 MIR1204
SE_02_053200145 chr8:127833967-127871856 37889 145 16 1102 24 2 57 93 MIR1204,PVT1
SE_02_053200075 chr8:128127701-128178403 50702 75 15 1507 36 6 147 72 MIR1208
SE_02_053200316 chr8:27675030-27704517 29487 316 11 824 80 3 36 126 MIR3622A,SCARA3,MIR3622B
SE_02_053200209 chr8:29737660-29784774 47114 209 18 1305 18 1 118 103 LOC101929450,LINC00589,LOC101929470
SE_02_053200231 chr8:40344460-40392214 47754 231 15 1344 111 17 108 0 C8ORF4,IDO2
SE_02_053200115 chr8:66089767-66130401 40634 115 14 1066 110 1 66 426 DNAJC5B,TRIM55,CRH
SE_02_053200055 chr8:66512568-66582353 69785 55 17 1781 72 2 232 776 C8ORF46,MYBL1
SE_02_053200310 chr8:68686870-68714710 27840 310 4 745 6 0 40 65 C8ORF34,C8ORF34-AS1
SE_02_053200105 chr8:68729296-68772575 43279 105 23 1219 2 1 90 0 C8ORF34,LINC01592
SE_02_053200095 chr8:68829047-68875450 46403 95 18 1321 25 2 66 0 LINC01592
SE_02_053200272 chr8:91599976-91631761 31785 272 19 798 32 7 130 0 SLC26A7
SE_02_053200073 chr8:95084905-95153593 68688 73 23 1739 219 5 56 186 PLEKHF2,MIR3150B,MIR3150A
SE_02_053200256 chr9:105908375-105916005 7630 256 2 214 11 1 63 0 TMEM38B
SE_02_053200270 chr9:107269922-107337056 67134 270 17 1895 156 7 139 915 RAD23B
SE_02_053200331 chr9:111035477-111050912 15435 331 4 429 59 2 32 394 LPAR1
SE_02_053200330 chr9:111897238-111922513 25275 330 15 761 85 0 43 102 UGCG,MIR4668
SE_02_053200130 chr9:114611791-114625634 13843 130 5 390 40 3 27 218 C9ORF91,ATP6V1G1
SE_02_053200210 chr9:120681793-120713017 31224 210 20 774 84 3 136 80 MEGF9
SE_02_053200052 chr9:12701056-12729616 28560 52 8 875 93 5 94 231 TYRP1,LURAP1L-AS1,LURAP1L
SE_02_053200347 chr9:127561407-127585962 24555 347 10 681 100 2 100 304 FAM129B,STXBP1
SE_02_053200015 chr9:12772056-12829549 57493 15 14 1857 43 5 185 378 LURAP1L,LURAP1L-AS1
SE_02_053200271 chr9:127956005-127978478 22473 271 13 599 60 0 0 0 FAM102A,ST6GALNAC4,PIP5KL1,DPM2
SE_02_053200203 chr9:12901110-12934410 33300 203 13 1337 6 1 49 0 LURAP1L-AS1
SE_02_053200170 chr9:129480961-129497274 16313 170 8 450 22 0 69 419 LINC00963
SE_02_053200028 chr9:13021860-13095633 73773 28 29 2314 48 6 141 0 MPDZ
SE_02_053200363 chr9:131372889-131405339 32450 363 12 914 50 1 54 146 PRRC2B
SE_02_053200319 chr9:137607834-137615903 8069 319 5 290 25 0 59 814 ARRDC1-AS1,ARRDC1,ZMYND19,DPH7,EHMT1
SE_02_053200160 chr9:14310173-14349613 39440 160 11 1079 7 1 364 191 NFIB
SE_02_053200162 chr9:73936295-73982526 46231 162 27 1131 5 1 0 0 LOC101927358,RORB
SE_02_053200333 chr9:94991172-95028139 36967 333 13 928 56 1 134 569 C9ORF3,MIR6081
SE_02_053200315 chrX:12971326-12989852 18526 315 7 388 19 0 0 283 TMSB4X,TLR8-AS1
SE_02_053200043 chrX:16562950-16634110 71160 43 29 1329 42 1 66 405 MIR548AM,CTPS2,S100G
SE_02_053200366 chrX:16659261-16671476 12215 366 6 281 19 0 47 114 CTPS2,MIR548AM,S100G,SYAP1
SE_02_053200077 chrX:9996081-10064449 68368 77 33 1433 5 4 0 175 WWC3,CLDN34

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2862201
Input ID: Name:GSM2862196
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb