Sample overview
| Species: | Human |
| Biosample type: | Cell line |
| Tissue type: | Mammary gland |
| Data source: | NCBI GEO/SRA |
| Biosample name: | T47D |
| Sample ID: | Sample_02_0532 |
| SE ID | SE Region | Size | Rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_053200084 | chr1:107624675-107704211 |
79536 | 84 | 34 | 2096 | 129 | 19 | 352 | 251 | VAV3 |
| SE_02_053200243 | chr1:109718145-109739877 |
21732 | 243 | 7 | 499 | 475 | 3 | 27 | 712 | GSTM3,GSTM5,EPS8L3,GSTM1 |
| SE_02_053200265 | chr1:146179544-146226922 |
47378 | 265 | 19 | 102 | 117 | 0 | 245 | 116 | NOTCH2NL,NBPF10 |
| SE_02_053200211 | chr1:148626959-148680404 |
53445 | 211 | 26 | 0 | 45 | 0 | 0 | 0 | NBPF14 |
| SE_02_053200192 | chr1:149389925-149441202 |
51277 | 192 | 29 | 0 | 169 | 0 | 0 | 0 | PPIAL4C,LINC00869 |
| SE_02_053200131 | chr1:150560176-150579153 |
18977 | 131 | 9 | 498 | 847 | 3 | 69 | 682 | ADAMTSL4,MCL1,ADAMTSL4-AS1,FALEC,ENSA,MIR4257 |
| SE_02_053200359 | chr1:150968827-150981258 |
12431 | 359 | 7 | 269 | 678 | 2 | 35 | 324 | CERS2,SETDB1,ANXA9,PRUNE,FAM63A |
| SE_02_053200174 | chr1:151970120-151992451 |
22331 | 174 | 5 | 551 | 668 | 0 | 67 | 119 | S100A10,NBPF18P,S100A11 |
| SE_02_053200190 | chr1:152033700-152049203 |
15503 | 190 | 4 | 319 | 186 | 0 | 34 | 310 | S100A11,LOC100131107,TCHHL1,NBPF18P,S100A10 |
| SE_02_053200138 | chr1:154180064-154200887 |
20823 | 138 | 9 | 469 | 267 | 3 | 124 | 576 | TPM3,C1ORF189,MIR190B,UBAP2L,NUP210L,C1ORF43 |
| SE_02_053200147 | chr1:154999694-155017406 |
17712 | 147 | 8 | 369 | 177 | 1 | 572 | 1336 | ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1 |
| SE_02_053200108 | chr1:156102828-156130257 |
27429 | 108 | 15 | 666 | 354 | 4 | 206 | 594 | LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A |
| SE_02_053200086 | chr1:156689276-156725806 |
36530 | 86 | 13 | 1050 | 245 | 0 | 96 | 833 | ISG20L2,CRABP2,HDGF,BCAN,NES,RRNAD1,PRCC,MRPL24 |
| SE_02_053200025 | chr1:164557316-164662184 |
104868 | 25 | 39 | 2631 | 30 | 11 | 864 | 628 | PBX1 |
| SE_02_053200343 | chr1:183262698-183282810 |
20112 | 343 | 9 | 544 | 135 | 1 | 66 | 191 | NMNAT2 |
| SE_02_053200137 | chr1:200351983-200417317 |
65334 | 137 | 18 | 1523 | 332 | 4 | 417 | 796 | ZNF281,LINC00862 |
| SE_02_053200246 | chr1:214213578-214221207 |
7629 | 246 | 3 | 220 | 12 | 0 | 13 | 0 | SMYD2 |
| SE_02_053200149 | chr1:214624729-214685916 |
61187 | 149 | 23 | 1774 | 208 | 5 | 194 | 1036 | CENPF |
| SE_02_053200006 | chr1:215084207-215283861 |
199654 | 6 | 78 | 4875 | 519 | 7 | 253 | 449 | KCNK2 |
| SE_02_053200051 | chr1:215393366-215431697 |
38331 | 51 | 16 | 1117 | 46 | 1 | 33 | 0 | KCTD3 |
| SE_02_053200010 | chr1:215450024-215543492 |
93468 | 10 | 39 | 2428 | 52 | 2 | 58 | 0 | KCTD3 |
| SE_02_053200050 | chr1:215567730-215624807 |
57077 | 50 | 30 | 1374 | 30 | 0 | 99 | 771 | USH2A,KCTD3 |
| SE_02_053200060 | chr1:22428455-22500596 |
72141 | 60 | 24 | 1753 | 184 | 5 | 160 | 357 | ZBTB40 |
| SE_02_053200053 | chr1:224386267-224458041 |
71774 | 53 | 27 | 1664 | 611 | 2 | 283 | 1274 | WDR26,MIR4742,CNIH4 |
| SE_02_053200325 | chr1:233105271-233115302 |
10031 | 325 | 6 | 240 | 7 | 0 | 0 | 48 | PCNXL2,NTPCR |
| SE_02_053200091 | chr1:234598658-234620667 |
22009 | 91 | 9 | 601 | 101 | 2 | 0 | 780 | IRF2BP2,LOC101927787,LINC00184 |
| SE_02_053200181 | chr1:234957749-234966266 |
8517 | 181 | 5 | 264 | 36 | 2 | 49 | 222 | LOC101927851 |
| SE_02_053200346 | chr1:235061259-235083747 |
22488 | 346 | 6 | 117 | 79 | 0 | 11 | 0 | LINC01348,SNORA14B,TOMM20 |
| SE_02_053200233 | chr1:23954491-23984545 |
30054 | 233 | 12 | 99 | 531 | 3 | 273 | 1174 | SRSF10,PNRC2,MIR378F,CNR2 |
| SE_02_053200069 | chr1:31896978-31940465 |
43487 | 69 | 16 | 1158 | 269 | 5 | 0 | 700 | PTP4A2 |
| SE_02_053200266 | chr1:40897398-40945598 |
48200 | 266 | 16 | 1477 | 296 | 2 | 77 | 0 | CTPS1,CITED4 |
| SE_02_053200301 | chr1:41858554-41892781 |
34227 | 301 | 15 | 913 | 153 | 7 | 66 | 0 | HIVEP3 |
| SE_02_053200380 | chr1:51313750-51332629 |
18879 | 380 | 5 | 484 | 96 | 0 | 59 | 622 | TTC39A-AS1,TTC39A |
| SE_02_053200289 | chr1:64981031-65004779 |
23748 | 289 | 9 | 600 | 97 | 1 | 27 | 285 | LINC01359,JAK1 |
| SE_02_053200230 | chr1:65041940-65074734 |
32794 | 230 | 17 | 840 | 207 | 2 | 105 | 98 | MIR3671,MIR101-1,LINC01359 |
| SE_02_053200183 | chr10:101041684-101067961 |
26277 | 183 | 7 | 648 | 105 | 0 | 141 | 1207 | KAZALD1,LZTS2,SFXN3,PDZD7 |
| SE_02_053200134 | chr10:110864530-110896720 |
32190 | 134 | 18 | 781 | 201 | 1 | 91 | 853 | PDCD4,PDCD4-AS1,SHOC2,BBIP1,RPL13AP6,MIR4680 |
| SE_02_053200063 | chr10:27495241-27559584 |
64343 | 63 | 23 | 1623 | 492 | 0 | 70 | 655 | RAB18 |
| SE_02_053200032 | chr10:28241662-28304258 |
62596 | 32 | 25 | 1688 | 476 | 14 | 50 | 319 | MPP7,MIR8086 |
| SE_02_053200208 | chr10:40365969-40488984 |
123015 | 208 | 34 | 0 | 0 | 0 | 0 | 0 | |
| SE_02_053200337 | chr10:40541944-40617410 |
75466 | 337 | 21 | 0 | 0 | 0 | 0 | 0 | |
| SE_02_053200238 | chr10:40752758-40863514 |
110756 | 238 | 27 | 0 | 0 | 0 | 0 | 0 | |
| SE_02_053200275 | chr10:41109509-41218714 |
109205 | 275 | 26 | 0 | 0 | 0 | 0 | 0 | |
| SE_02_053200361 | chr10:41460534-41539824 |
79290 | 361 | 25 | 0 | 14 | 0 | 0 | 0 | LOC441666 |
| SE_02_053200377 | chr10:43394763-43407164 |
12401 | 377 | 6 | 363 | 246 | 0 | 42 | 375 | HNRNPF,ZNF487,FXYD4 |
| SE_02_053200164 | chr10:44161547-44183743 |
22196 | 164 | 5 | 675 | 50 | 6 | 28 | 0 | C10ORF142 |
| SE_02_053200111 | chr10:58065758-58111486 |
45728 | 111 | 24 | 1265 | 313 | 8 | 26 | 0 | IPMK |
| SE_02_053200321 | chr10:60130216-60149011 |
18795 | 321 | 5 | 504 | 15 | 5 | 71 | 250 | ANK3 |
| SE_02_053200341 | chr10:61924116-61951442 |
27326 | 341 | 13 | 739 | 42 | 8 | 141 | 67 | ARID5B |
| SE_02_053200180 | chr10:62076922-62113422 |
36500 | 180 | 14 | 945 | 54 | 8 | 282 | 818 | ARID5B |
| SE_02_053200365 | chr10:6355148-6366718 |
11570 | 365 | 5 | 318 | 21 | 4 | 1 | 0 | LOC399715 |
| SE_02_053200194 | chr10:77844766-77899774 |
55008 | 194 | 16 | 1540 | 447 | 1 | 118 | 881 | DLG5,DLG5-AS1 |
| SE_02_053200264 | chr10:79070964-79102163 |
31199 | 264 | 10 | 927 | 78 | 15 | 142 | 0 | ZMIZ1,ZMIZ1-AS1 |
| SE_02_053200017 | chr10:8045352-8076253 |
30901 | 17 | 9 | 970 | 103 | 25 | 339 | 1693 | GATA3-AS1,GATA3 |
| SE_02_053200038 | chr10:80939671-81019289 |
79618 | 38 | 29 | 2203 | 24 | 9 | 90 | 0 | SH2D4B |
| SE_02_053200357 | chr10:88949246-88976161 |
26915 | 357 | 7 | 639 | 118 | 2 | 0 | 564 | ACTA2,FAS,ACTA2-AS1,FAS-AS1 |
| SE_02_053200354 | chr10:8948016-8987977 |
39961 | 354 | 16 | 1090 | 76 | 8 | 136 | 0 | LOC105755953 |
| SE_02_053200027 | chr10:9018639-9123080 |
104441 | 27 | 46 | 2910 | 201 | 51 | 231 | 0 | LOC105755953 |
| SE_02_053200014 | chr10:9137244-9243990 |
106746 | 14 | 25 | 2890 | 1 | 7 | 320 | 0 | LOC101928272,LINC00709 |
| SE_02_053200026 | chr10:93432152-93482709 |
50557 | 26 | 19 | 1459 | 358 | 7 | 127 | 229 | MYOF,CEP55 |
| SE_02_053200226 | chr10_KI270825v1_alt:83980-128895 |
44915 | 226 | 16 | 0 | 0 | 0 | 0 | 0 | DLG5 |
| SE_02_053200018 | chr11:101021861-101127315 |
105454 | 18 | 72 | 2763 | 804 | 10 | 132 | 1054 | PGR,LOC101054525,TMEM133 |
| SE_02_053200009 | chr11:101290887-101414805 |
123918 | 9 | 43 | 3681 | 86 | 19 | 117 | 0 | MIR3920 |
| SE_02_053200078 | chr11:101427984-101456783 |
28799 | 78 | 7 | 775 | 14 | 2 | 52 | 231 | TRPC6,MIR3920 |
| SE_02_053200031 | chr11:102613237-102667323 |
54086 | 31 | 23 | 1785 | 591 | 6 | 42 | 132 | MMP20,MMP27 |
| SE_02_053200106 | chr11:106156450-106206015 |
49565 | 106 | 16 | 1374 | 1377 | 8 | 0 | 0 | LOC101928535 |
| SE_02_053200312 | chr11:10859900-10902804 |
42904 | 312 | 22 | 1150 | 298 | 7 | 88 | 377 | ZBED5-AS1,ZBED5 |
| SE_02_053200136 | chr11:118912670-118930238 |
17568 | 136 | 16 | 411 | 215 | 2 | 271 | 0 | MIR4492,CXCR5,BCL9L,UPK2,FOXR1 |
| SE_02_053200035 | chr11:120626146-120659282 |
33136 | 35 | 12 | 1058 | 58 | 11 | 87 | 75 | GRIK4 |
| SE_02_053200348 | chr11:121456417-121489108 |
32691 | 348 | 9 | 926 | 41 | 0 | 172 | 212 | SORL1 |
| SE_02_053200240 | chr11:123059780-123072964 |
13184 | 240 | 5 | 457 | 86 | 3 | 71 | 468 | HSPA8,CLMP,SNORD14E,LOC341056,SNORD14C,SNORD14D |
| SE_02_053200045 | chr11:129140729-129293752 |
153023 | 45 | 50 | 3802 | 641 | 3 | 326 | 155 | ARHGAP32 |
| SE_02_053200082 | chr11:129313620-129326245 |
12625 | 82 | 5 | 354 | 7 | 0 | 70 | 0 | BARX2 |
| SE_02_053200019 | chr11:34619485-34672574 |
53089 | 19 | 18 | 1425 | 232 | 7 | 317 | 1007 | EHF |
| SE_02_053200195 | chr11:48028857-48056616 |
27759 | 195 | 10 | 702 | 281 | 4 | 97 | 0 | PTPRJ,MIR3161 |
| SE_02_053200102 | chr11:57761861-57801490 |
39629 | 102 | 17 | 879 | 947 | 2 | 266 | 470 | CTNND1,TMX2-CTNND1,BTBD18,TMX2,C11ORF31,MED19 |
| SE_02_053200079 | chr11:61149338-61166122 |
16784 | 79 | 9 | 451 | 333 | 24 | 34 | 132 | VPS37C,PGA3,CD5 |
| SE_02_053200247 | chr11:61687602-61699799 |
12197 | 247 | 10 | 313 | 116 | 9 | 79 | 0 | DAGLA |
| SE_02_053200179 | chr11:62498919-62513284 |
14365 | 179 | 9 | 340 | 85 | 0 | 55 | 0 | AHNAK |
| SE_02_053200186 | chr11:62539129-62557029 |
17900 | 186 | 11 | 418 | 453 | 1 | 184 | 185 | AHNAK,EEF1G,TUT1,MTA2,MIR6747 |
| SE_02_053200200 | chr11:63555958-63584013 |
28055 | 200 | 12 | 684 | 127 | 1 | 14 | 361 | HRASLS2,PLA2G16,RARRES3,LGALS12 |
| SE_02_053200081 | chr11:63840375-63878174 |
37799 | 81 | 21 | 1020 | 386 | 1 | 120 | 0 | MARK2,RCOR2,C11ORF84 |
| SE_02_053200061 | chr11:65418492-65442257 |
23765 | 61 | 19 | 608 | 374 | 1 | 40 | 2260 | NEAT1,SLC25A45,FRMD8,MIR612 |
| SE_02_053200012 | chr11:65471263-65516806 |
45543 | 12 | 17 | 1245 | 1845 | 4 | 50 | 1018 | MALAT1,SCYL1,LTBP3,NEAT1,MIR612 |
| SE_02_053200234 | chr11:67241298-67270612 |
29314 | 234 | 11 | 625 | 242 | 0 | 206 | 1491 | KDM2A,ADRBK1,ANKRD13D,SSH3,LOC100130987 |
| SE_02_053200177 | chr11:72026442-72050763 |
24321 | 177 | 13 | 588 | 448 | 2 | 88 | 271 | NUMA1,IL18BP,LOC100128494,LRTOMT,MIR3165 |
| SE_02_053200318 | chr11:73192565-73201793 |
9228 | 318 | 3 | 255 | 64 | 1 | 27 | 0 | P2RY2 |
| SE_02_053200368 | chr11:73272249-73284684 |
12435 | 368 | 3 | 294 | 56 | 1 | 14 | 69 | P2RY6,ARHGEF17 |
| SE_02_053200324 | chr11:7572000-7614276 |
42276 | 324 | 12 | 1264 | 321 | 5 | 188 | 518 | PPFIBP2 |
| SE_02_053200286 | chr11:78286159-78315313 |
29154 | 286 | 14 | 809 | 449 | 15 | 61 | 0 | GAB2 |
| SE_02_053200307 | chr11:83709517-83729885 |
20368 | 307 | 7 | 575 | 70 | 0 | 58 | 0 | DLG2 |
| SE_02_053200303 | chr11:90635122-90671456 |
36334 | 303 | 21 | 1098 | 176 | 2 | 18 | 0 | DISC1FP1,MIR4490 |
| SE_02_053200112 | chr11:90801700-90858020 |
56320 | 112 | 34 | 1691 | 79 | 6 | 26 | 74 | DISC1FP1,MIR1261 |
| SE_02_053200269 | chr11:90888286-90917076 |
28790 | 269 | 18 | 766 | 57 | 1 | 5 | 0 | DISC1FP1,MIR1261 |
| SE_02_053200224 | chr12:104275998-104319002 |
43004 | 224 | 11 | 1131 | 405 | 2 | 52 | 724 | TXNRD1,EID3 |
| SE_02_053200002 | chr12:115956161-116305445 |
349284 | 2 | 188 | 7893 | 37 | 10 | 267 | 2202 | MED13L,MIR620 |
| SE_02_053200281 | chr12:116388262-116407520 |
19258 | 281 | 6 | 545 | 9 | 3 | 0 | 0 | MIR4472-2 |
| SE_02_053200223 | chr12:116493086-116506996 |
13910 | 223 | 9 | 399 | 78 | 0 | 1 | 0 | LINC00173 |
| SE_02_053200349 | chr12:118269769-118302391 |
32622 | 349 | 8 | 730 | 286 | 1 | 7 | 0 | TAOK3 |
| SE_02_053200088 | chr12:124910087-124940437 |
30350 | 88 | 12 | 1117 | 85 | 4 | 71 | 1108 | MIR5188,UBC,SCARB1,DHX37 |
| SE_02_053200375 | chr12:14879755-14907046 |
27291 | 375 | 13 | 770 | 426 | 1 | 48 | 307 | MGP,ERP27,ART4 |
| SE_02_053200044 | chr12:15107967-15164299 |
56332 | 44 | 25 | 1379 | 335 | 4 | 114 | 199 | RERG,RERG-AS1 |
| SE_02_053200159 | chr12:15180945-15227218 |
46273 | 159 | 11 | 1103 | 91 | 6 | 138 | 182 | RERG,RERG-AS1 |
| SE_02_053200279 | chr12:31748607-31780989 |
32382 | 279 | 7 | 924 | 283 | 0 | 0 | 0 | H3F3C,AMN1 |
| SE_02_053200277 | chr12:45259932-45304286 |
44354 | 277 | 16 | 1130 | 149 | 4 | 0 | 147 | ANO6,PLEKHA8P1 |
| SE_02_053200146 | chr12:50567947-50598531 |
30584 | 146 | 13 | 722 | 1373 | 0 | 23 | 0 | DIP2B |
| SE_02_053200260 | chr12:50612893-50637930 |
25037 | 260 | 8 | 597 | 818 | 0 | 24 | 59 | DIP2B |
| SE_02_053200244 | chr12:52235425-52249158 |
13733 | 244 | 8 | 393 | 149 | 2 | 54 | 785 | KRT7,KRT80,LINC00592,C12ORF80,KRT81 |
| SE_02_053200165 | chr12:52885163-52908253 |
23090 | 165 | 12 | 704 | 377 | 2 | 74 | 971 | KRT8,KRT18,KRT78 |
| SE_02_053200262 | chr12:52967277-52980485 |
13208 | 262 | 8 | 396 | 185 | 1 | 20 | 0 | KRT18,EIF4B,KRT8 |
| SE_02_053200378 | chr12:56672981-56688119 |
15138 | 378 | 9 | 499 | 251 | 0 | 16 | 222 | PTGES3,NACA,BAZ2A,ATP5B,SNORD59B,SNORD59A |
| SE_02_053200376 | chr12:58890629-58920078 |
29449 | 376 | 10 | 837 | 56 | 1 | 146 | 210 | LRIG3 |
| SE_02_053200144 | chr12:68781213-68813217 |
32004 | 144 | 7 | 816 | 225 | 2 | 18 | 442 | MDM2,LOC100130075,SLC35E3 |
| SE_02_053200239 | chr12:722642-755346 |
32704 | 239 | 9 | 876 | 60 | 0 | 79 | 451 | WNK1 |
| SE_02_053200257 | chr12:75698701-75726393 |
27692 | 257 | 12 | 815 | 57 | 2 | 66 | 0 | KRR1 |
| SE_02_053200245 | chr12:89448318-89475470 |
27152 | 245 | 10 | 634 | 219 | 2 | 90 | 252 | POC1B,GALNT4 |
| SE_02_053200351 | chr12:91414069-91435866 |
21797 | 351 | 9 | 527 | 35 | 1 | 61 | 0 | DCN |
| SE_02_053200168 | chr12:93133418-93168629 |
35211 | 168 | 16 | 901 | 35 | 1 | 72 | 0 | LOC643339,LOC102724933 |
| SE_02_053200254 | chr13:110526988-110561226 |
34238 | 254 | 12 | 1062 | 282 | 7 | 5 | 11 | RAB20,COL4A2-AS1 |
| SE_02_053200283 | chr13:33207825-33230832 |
23007 | 283 | 19 | 623 | 103 | 1 | 72 | 0 | STARD13,STARD13-AS |
| SE_02_053200126 | chr14:100012059-100074356 |
62297 | 126 | 21 | 1712 | 304 | 2 | 59 | 170 | EVL,MIR342,MIR151B |
| SE_02_053200152 | chr14:105014346-105043963 |
29617 | 152 | 11 | 693 | 1063 | 0 | 6 | 128 | CDCA4,C14ORF79,AHNAK2,GPR132 |
| SE_02_053200237 | chr14:105466013-105482853 |
16840 | 237 | 6 | 557 | 109 | 0 | 116 | 2351 | MTA1,CRIP2,C14ORF80,CRIP1,TMEM121,LOC100507437 |
| SE_02_053200309 | chr14:35320611-35353929 |
33318 | 309 | 8 | 1064 | 1262 | 0 | 42 | 0 | PSMA6 |
| SE_02_053200122 | chr14:37402456-37448336 |
45880 | 122 | 19 | 1087 | 296 | 6 | 114 | 26 | MIPOL1,FOXA1 |
| SE_02_053200008 | chr14:37512158-37624211 |
112053 | 8 | 55 | 2557 | 888 | 35 | 554 | 1373 | TTC6,MIPOL1,FOXA1 |
| SE_02_053200373 | chr14:49893600-49912173 |
18573 | 373 | 4 | 444 | 90 | 1 | 97 | 355 | ARF6,NEMF,RN7SL2 |
| SE_02_053200092 | chr14:49949646-49976806 |
27160 | 92 | 8 | 714 | 101 | 2 | 45 | 126 | MIR6076,LINC01588 |
| SE_02_053200267 | chr14:49989917-50004704 |
14787 | 267 | 5 | 420 | 64 | 0 | 32 | 375 | LINC01588,MIR6076 |
| SE_02_053200364 | chr14:54647329-54677587 |
30258 | 364 | 10 | 825 | 67 | 1 | 117 | 0 | SAMD4A |
| SE_02_053200041 | chr14:68137595-68197143 |
59548 | 41 | 25 | 1433 | 185 | 20 | 358 | 0 | RAD51B |
| SE_02_053200292 | chr14:73526017-73545835 |
19818 | 292 | 10 | 378 | 233 | 0 | 61 | 581 | ACOT1,HEATR4,ACOT2,C14ORF169,ACOT4 |
| SE_02_053200163 | chr14:73592439-73614726 |
22287 | 163 | 9 | 609 | 1204 | 3 | 32 | 232 | ACOT4,ACOT2,HEATR4,DNAL1,ACOT6 |
| SE_02_053200304 | chr14:75829657-75855583 |
25926 | 304 | 7 | 608 | 203 | 0 | 89 | 0 | TTLL5,TGFB3 |
| SE_02_053200182 | chr14:77006187-77035045 |
28858 | 182 | 13 | 884 | 385 | 8 | 310 | 971 | IRF2BPL,LOC283575,LOC102724190 |
| SE_02_053200293 | chr14:77572700-77599238 |
26538 | 293 | 6 | 731 | 554 | 0 | 35 | 119 | SPTLC2 |
| SE_02_053200294 | chr14:91114373-91128970 |
14597 | 294 | 4 | 404 | 141 | 3 | 14 | 212 | C14ORF159,SNORA11B |
| SE_02_053200118 | chr14:94313141-94342309 |
29168 | 118 | 11 | 818 | 188 | 5 | 22 | 246 | SERPINA6,SERPINA10,SERPINA1,SERPINA2 |
| SE_02_053200080 | chr14:94386704-94421946 |
35242 | 80 | 12 | 1120 | 138 | 13 | 22 | 290 | SERPINA1,SERPINA11,SERPINA2 |
| SE_02_053200119 | chr14_KI270847v1_alt:1429329-1456830 |
27501 | 119 | 13 | 0 | 0 | 0 | 0 | 0 | SERPINA6 |
| SE_02_053200326 | chr15:33007850-33037702 |
29852 | 326 | 14 | 1267 | 295 | 0 | 38 | 25 | FMN1 |
| SE_02_053200220 | chr15:33054614-33084058 |
29444 | 220 | 8 | 1090 | 189 | 3 | 72 | 344 | FMN1 |
| SE_02_053200120 | chr15:39581242-39624172 |
42930 | 120 | 19 | 1088 | 276 | 2 | 0 | 1587 | FSIP1,THBS1 |
| SE_02_053200098 | chr15:39639105-39686740 |
47635 | 98 | 12 | 1225 | 315 | 0 | 67 | 0 | FSIP1,THBS1 |
| SE_02_053200379 | chr15:40766275-40803922 |
37647 | 379 | 9 | 1010 | 987 | 0 | 142 | 1565 | C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1 |
| SE_02_053200099 | chr15:63365347-63403563 |
38216 | 99 | 12 | 1053 | 297 | 7 | 61 | 162 | CA12,LOC102723344 |
| SE_02_053200046 | chr15:71068496-71114330 |
45834 | 46 | 16 | 1141 | 179 | 0 | 62 | 315 | CT62,THSD4 |
| SE_02_053200057 | chr15:92797404-92845513 |
48109 | 57 | 16 | 1478 | 135 | 0 | 52 | 0 | LINC01578,ASB9P1 |
| SE_02_053200158 | chr15:98712028-98763862 |
51834 | 158 | 14 | 1638 | 129 | 40 | 230 | 0 | IGF1R,MIR4714 |
| SE_02_053200094 | chr15:98841063-98878387 |
37324 | 94 | 18 | 1084 | 30 | 2 | 178 | 0 | IGF1R,MIR4714 |
| SE_02_053200021 | chr16:34571637-34595697 |
24060 | 21 | 10 | 0 | 24 | 0 | 0 | 0 | LINC00273 |
| SE_02_053200007 | chr16:46380683-46401638 |
20955 | 7 | 12 | 543 | 11 | 0 | 0 | 0 | ANKRD26P1,SHCBP1 |
| SE_02_053200327 | chr16:48236135-48256928 |
20793 | 327 | 13 | 556 | 283 | 0 | 35 | 333 | LONP2,ABCC11 |
| SE_02_053200282 | chr16:53768013-53809240 |
41227 | 282 | 13 | 1024 | 163 | 83 | 96 | 0 | FTO |
| SE_02_053200248 | chr16:54067933-54098581 |
30648 | 248 | 13 | 838 | 44 | 4 | 221 | 0 | FTO,FTO-IT1,LOC100996338 |
| SE_02_053200252 | chr16:54921030-54937394 |
16364 | 252 | 8 | 398 | 72 | 0 | 354 | 1100 | CRNDE,IRX5 |
| SE_02_053200132 | chr16:84093862-84116496 |
22634 | 132 | 15 | 847 | 513 | 2 | 46 | 235 | MBTPS1,DNAAF1,HSDL1 |
| SE_02_053200222 | chr16:84723553-84760594 |
37041 | 222 | 11 | 1564 | 225 | 11 | 38 | 412 | USP10 |
| SE_02_053200071 | chr16:85459502-85475317 |
15815 | 71 | 12 | 602 | 34 | 1 | 33 | 0 | GSE1 |
| SE_02_053200125 | chr16:85545468-85574943 |
29475 | 125 | 12 | 1051 | 26 | 0 | 218 | 0 | GSE1 |
| SE_02_053200291 | chr17:17689923-17725580 |
35657 | 291 | 16 | 978 | 501 | 1 | 142 | 121 | RAI1,SMCR2,RAI1-AS1 |
| SE_02_053200340 | chr17:31069118-31076125 |
7007 | 340 | 2 | 146 | 77 | 0 | 10 | 0 | MIR4733,NF1 |
| SE_02_053200274 | chr17:40111963-40136670 |
24707 | 274 | 5 | 567 | 278 | 0 | 302 | 1260 | MSL1,THRA,RAPGEFL1,NR1D1,MIR6866,CASC3 |
| SE_02_053200048 | chr17:40300871-40332910 |
32039 | 48 | 23 | 711 | 130 | 0 | 531 | 746 | RARA,CDC6,RARA-AS1,GJD3 |
| SE_02_053200287 | chr17:40576302-40619907 |
43605 | 287 | 10 | 1152 | 360 | 4 | 42 | 0 | CCR7,KRT222,SMARCE1 |
| SE_02_053200036 | chr17:41521062-41549854 |
28792 | 36 | 13 | 850 | 206 | 3 | 102 | 784 | LINC00974,KRT19,MIR6510,KRT35,KRT36,KRT15,KRT9,KRT13,KRT14 |
| SE_02_053200229 | chr17:43359148-43370448 |
11300 | 229 | 5 | 479 | 1679 | 3 | 0 | 95 | LINC00910,ARL4D |
| SE_02_053200127 | chr17:50700687-50765660 |
64973 | 127 | 12 | 1645 | 349 | 3 | 229 | 1383 | ANKRD40,LUC7L3,LINC00483,MIR8059 |
| SE_02_053200058 | chr17:50829155-50864653 |
35498 | 58 | 9 | 1076 | 229 | 3 | 279 | 1207 | TOB1,WFIKKN2,TOB1-AS1 |
| SE_02_053200185 | chr17:50902502-50921037 |
18535 | 185 | 11 | 540 | 117 | 1 | 61 | 0 | TOB1-AS1,TOB1 |
| SE_02_053200214 | chr17:50935653-50954243 |
18590 | 214 | 6 | 535 | 337 | 0 | 64 | 0 | TOB1 |
| SE_02_053200352 | chr17:56160648-56177087 |
16439 | 352 | 8 | 387 | 16 | 0 | 62 | 0 | ANKFN1 |
| SE_02_053200064 | chr17:57889695-57905642 |
15947 | 64 | 8 | 423 | 57 | 0 | 118 | 149 | CUEDC1,MRPS23 |
| SE_02_053200037 | chr17:57918711-57954692 |
35981 | 37 | 19 | 915 | 151 | 3 | 105 | 0 | CUEDC1,VEZF1 |
| SE_02_053200100 | chr17:57972220-58015262 |
43042 | 100 | 15 | 1075 | 205 | 0 | 529 | 2049 | SRSF1,VEZF1,CUEDC1 |
| SE_02_053200116 | chr17:59836014-59870023 |
34009 | 116 | 12 | 847 | 633 | 3 | 111 | 463 | TUBD1,MIR21,VMP1,RPS6KB1 |
| SE_02_053200235 | chr17:68437148-68464364 |
27216 | 235 | 8 | 659 | 310 | 3 | 78 | 353 | WIPI1,PRKAR1A,MIR635 |
| SE_02_053200193 | chr17:73289896-73310676 |
20780 | 193 | 10 | 645 | 92 | 2 | 43 | 0 | CDC42EP4,CPSF4L |
| SE_02_053200369 | chr17:74379720-74396932 |
17212 | 369 | 7 | 561 | 53 | 2 | 23 | 0 | GPRC5C,GPR142,BTBD17 |
| SE_02_053200296 | chr17:74426804-74454724 |
27920 | 296 | 6 | 862 | 152 | 1 | 174 | 1538 | GPRC5C,CD300A |
| SE_02_053200047 | chr17:74744904-74774348 |
29444 | 47 | 14 | 878 | 241 | 5 | 160 | 2088 | RAB37,NAT9,SLC9A3R1,MIR3615,TMEM104,CD300LF |
| SE_02_053200300 | chr17:82099964-82110896 |
10932 | 300 | 9 | 427 | 494 | 1 | 0 | 173 | CCDC57,GPS1,DUS1L,RFNG,FASN |
| SE_02_053200314 | chr18:14451295-14472695 |
21400 | 314 | 11 | 626 | 183 | 0 | 0 | 0 | CXADRP3,ANKRD20A5P |
| SE_02_053200062 | chr18:14780843-14815495 |
34652 | 62 | 13 | 1062 | 214 | 0 | 0 | 415 | ANKRD30B,MIR3156-2 |
| SE_02_053200250 | chr18:59004226-59027850 |
23624 | 250 | 15 | 666 | 69 | 5 | 28 | 0 | OACYLP |
| SE_02_053200241 | chr19:1162005-1183931 |
21926 | 241 | 12 | 772 | 164 | 0 | 48 | 158 | SBNO2,STK11 |
| SE_02_053200207 | chr19:16442436-16470452 |
28016 | 207 | 14 | 832 | 282 | 1 | 3 | 0 | EPS15L1,CALR3,C19ORF44 |
| SE_02_053200356 | chr19:39150286-39168257 |
17971 | 356 | 13 | 584 | 229 | 0 | 22 | 39 | PAK4,SYCN,NCCRP1 |
| SE_02_053200335 | chr19:40417290-40446654 |
29364 | 335 | 6 | 809 | 456 | 1 | 142 | 884 | SERTAD1,SERTAD3,SPTBN4,PRX,MIR6796,BLVRB,HIPK4 |
| SE_02_053200065 | chr19:46861570-46935717 |
74147 | 65 | 39 | 1856 | 180 | 0 | 250 | 474 | ARHGAP35,SNAR-E,AP2S1 |
| SE_02_053200342 | chr19:47094967-47125334 |
30367 | 342 | 10 | 875 | 55 | 1 | 167 | 324 | ZC3H4,TMEM160,SAE1 |
| SE_02_053200142 | chr19:4970981-5002227 |
31246 | 142 | 17 | 1101 | 331 | 2 | 3 | 0 | KDM4B,MIR4747 |
| SE_02_053200090 | chr19:57792392-57824553 |
32161 | 90 | 16 | 906 | 1421 | 1 | 0 | 775 | ZNF552,ZNF586,ZNF587,ZNF587B,FKBP1AP1,ZNF776 |
| SE_02_053200205 | chr2:100054618-100084536 |
29918 | 205 | 15 | 718 | 169 | 4 | 138 | 0 | AFF3 |
| SE_02_053200259 | chr2:105371616-105406360 |
34744 | 259 | 9 | 1005 | 261 | 1 | 95 | 819 | FHL2,TGFBRAP1,C2ORF49 |
| SE_02_053200129 | chr2:11478151-11513013 |
34862 | 129 | 19 | 949 | 34 | 0 | 56 | 0 | GREB1,MIR4429,E2F6 |
| SE_02_053200066 | chr2:11529659-11561206 |
31547 | 66 | 13 | 957 | 69 | 2 | 43 | 421 | MIR4429,GREB1 |
| SE_02_053200336 | chr2:129943350-129982689 |
39339 | 336 | 15 | 1127 | 1068 | 2 | 0 | 674 | RAB6C,LOC101927924,RAB6C-AS1,LOC389033 |
| SE_02_053200196 | chr2:142856618-142880413 |
23795 | 196 | 14 | 573 | 153 | 0 | 27 | 52 | KYNU |
| SE_02_053200085 | chr2:143329144-143366352 |
37208 | 85 | 18 | 955 | 9 | 6 | 330 | 0 | ARHGAP15,KYNU |
| SE_02_053200227 | chr2:189465679-189501265 |
35586 | 227 | 13 | 953 | 356 | 1 | 76 | 339 | WDR75 |
| SE_02_053200039 | chr2:189518212-189583042 |
64830 | 39 | 32 | 1628 | 257 | 4 | 197 | 756 | SLC40A1 |
| SE_02_053200034 | chr2:211372163-211478766 |
106603 | 34 | 48 | 2908 | 10 | 7 | 512 | 983 | ERBB4,CPS1-IT1 |
| SE_02_053200236 | chr2:213249940-213273913 |
23973 | 236 | 18 | 623 | 179 | 15 | 52 | 0 | LOC100130451,SPAG16 |
| SE_02_053200153 | chr2:215965671-216023209 |
57538 | 153 | 22 | 1587 | 248 | 6 | 99 | 215 | MREG |
| SE_02_053200334 | chr2:220075859-220104795 |
28936 | 334 | 12 | 786 | 232 | 0 | 250 | 0 | MIR4268,SLC4A3 |
| SE_02_053200251 | chr2:237482094-237513632 |
31538 | 251 | 8 | 1099 | 348 | 1 | 26 | 539 | MLPH,MIR6811 |
| SE_02_053200362 | chr2:74187636-74213252 |
25616 | 362 | 11 | 698 | 271 | 2 | 36 | 523 | MTHFD2,BOLA3-AS1,BOLA3,MOB1A |
| SE_02_053200167 | chr2:99654898-99689845 |
34947 | 167 | 14 | 922 | 316 | 2 | 100 | 36 | AFF3,REV1 |
| SE_02_053200202 | chr2:99706219-99730543 |
24324 | 202 | 7 | 634 | 179 | 2 | 49 | 41 | AFF3,REV1 |
| SE_02_053200329 | chr20:16735456-16765022 |
29566 | 329 | 9 | 894 | 40 | 2 | 97 | 441 | OTOR,SNRPB2 |
| SE_02_053200049 | chr20:17533812-17611451 |
77639 | 49 | 30 | 2020 | 330 | 5 | 140 | 838 | DSTN,BFSP1 |
| SE_02_053200317 | chr20:19750819-19785479 |
34660 | 317 | 12 | 902 | 105 | 6 | 42 | 0 | RIN2 |
| SE_02_053200216 | chr20:20438850-20466319 |
27469 | 216 | 8 | 636 | 15 | 2 | 214 | 0 | RALGAPA2,INSM1 |
| SE_02_053200139 | chr20:20547691-20594133 |
46442 | 139 | 21 | 1082 | 88 | 4 | 291 | 278 | RALGAPA2 |
| SE_02_053200059 | chr20:31662513-31719437 |
56924 | 59 | 24 | 1273 | 968 | 9 | 237 | 525 | BCL2L1,TPX2,ABALON,COX4I2 |
| SE_02_053200313 | chr20:33717855-33735560 |
17705 | 313 | 3 | 456 | 141 | 0 | 30 | 239 | PXMP4,ZNF341,E2F1,NECAB3 |
| SE_02_053200107 | chr20:348605-383985 |
35380 | 107 | 11 | 1160 | 207 | 4 | 40 | 999 | TRIB3,NRSN2,RBCK1,SOX12,NRSN2-AS1 |
| SE_02_053200172 | chr20:35762152-35793737 |
31585 | 172 | 11 | 805 | 2035 | 0 | 58 | 201 | PHF20,RBM39 |
| SE_02_053200109 | chr20:44164448-44190295 |
25847 | 109 | 9 | 688 | 269 | 10 | 86 | 678 | JPH2,OSER1-AS1,OSER1 |
| SE_02_053200268 | chr20:47314844-47334579 |
19735 | 268 | 5 | 528 | 18 | 0 | 29 | 420 | ZMYND8,LOC100131496 |
| SE_02_053200128 | chr20:47350555-47360683 |
10128 | 128 | 4 | 212 | 3 | 2 | 120 | 681 | ZMYND8,LOC100131496 |
| SE_02_053200176 | chr20:48809074-48827709 |
18635 | 176 | 8 | 507 | 147 | 1 | 48 | 63 | PREX1 |
| SE_02_053200011 | chr20:50722382-50765287 |
42905 | 11 | 22 | 1151 | 167 | 4 | 143 | 595 | PARD6B,BCAS4,FAM65C |
| SE_02_053200367 | chr20:50790048-50825133 |
35085 | 367 | 8 | 997 | 242 | 1 | 42 | 241 | BCAS4 |
| SE_02_053200104 | chr20:53578550-53598034 |
19484 | 104 | 7 | 466 | 23 | 1 | 126 | 455 | ZNF217,LOC101927770 |
| SE_02_053200306 | chr20:53642460-53660916 |
18456 | 306 | 5 | 493 | 21 | 1 | 43 | 0 | ZNF217 |
| SE_02_053200114 | chr20:53735570-53791181 |
55611 | 114 | 16 | 1629 | 57 | 7 | 53 | 0 | SUMO1P1 |
| SE_02_053200166 | chr20:53851689-53873193 |
21504 | 166 | 7 | 628 | 10 | 0 | 33 | 0 | SUMO1P1 |
| SE_02_053200299 | chr20:59917953-59930649 |
12696 | 299 | 6 | 317 | 19 | 0 | 19 | 103 | SYCP2,FAM217B,PPP1R3D,CDH26 |
| SE_02_053200169 | chr21:16416360-16457925 |
41565 | 169 | 13 | 1262 | 11 | 9 | 166 | 0 | MIR99AHG,MIR99A |
| SE_02_053200023 | chr21:20998476-21124699 |
126223 | 23 | 52 | 3946 | 157 | 4 | 224 | 43 | NCAM2 |
| SE_02_053200173 | chr21:29377271-29396379 |
19108 | 173 | 8 | 481 | 191 | 2 | 33 | 0 | BACH1-IT2 |
| SE_02_053200030 | chr21:40310594-40352324 |
41730 | 30 | 15 | 1222 | 13 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_053200143 | chr21:40378996-40388951 |
9955 | 143 | 4 | 322 | 8 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_053200024 | chr22:28783002-28830289 |
47287 | 24 | 21 | 1164 | 712 | 3 | 126 | 902 | XBP1,CCDC117,CHEK2,HSCB |
| SE_02_053200217 | chr3:133428114-133462425 |
34311 | 217 | 16 | 1015 | 93 | 3 | 53 | 448 | BFSP2 |
| SE_02_053200103 | chr3:150747240-150770652 |
23412 | 103 | 7 | 598 | 160 | 2 | 91 | 362 | SIAH2,LOC101928105,ERICH6-AS1,ERICH6 |
| SE_02_053200042 | chr3:174434380-174497701 |
63321 | 42 | 24 | 1509 | 58 | 3 | 87 | 140 | NAALADL2 |
| SE_02_053200212 | chr3:174856517-174876776 |
20259 | 212 | 6 | 588 | 8 | 0 | 73 | 86 | NAALADL2 |
| SE_02_053200148 | chr3:176847814-176869685 |
21871 | 148 | 10 | 619 | 18 | 2 | 26 | 0 | LINC01209 |
| SE_02_053200067 | chr3:176893826-176955128 |
61302 | 67 | 20 | 1816 | 141 | 11 | 130 | 0 | LINC01209 |
| SE_02_053200097 | chr3:177019453-177127117 |
107664 | 97 | 38 | 2936 | 214 | 7 | 204 | 725 | TBL1XR1 |
| SE_02_053200285 | chr3:177193787-177199664 |
5877 | 285 | 2 | 154 | 18 | 0 | 29 | 287 | TBL1XR1 |
| SE_02_053200087 | chr3:177594500-177636808 |
42308 | 87 | 19 | 1096 | 201 | 12 | 75 | 32 | LINC00578 |
| SE_02_053200322 | chr3:179436674-179465343 |
28669 | 322 | 4 | 738 | 191 | 2 | 47 | 153 | GNB4 |
| SE_02_053200338 | chr3:179811437-179829606 |
18169 | 338 | 6 | 433 | 61 | 1 | 23 | 139 | PEX5L,PEX5L-AS2 |
| SE_02_053200040 | chr3:18344906-18444015 |
99109 | 40 | 37 | 2426 | 96 | 10 | 1332 | 1278 | SATB1,SATB1-AS1 |
| SE_02_053200255 | chr3:18837061-18848453 |
11392 | 255 | 4 | 289 | 0 | 1 | 73 | 0 | KCNH8 |
| SE_02_053200350 | chr3:189096142-189109189 |
13047 | 350 | 8 | 311 | 0 | 1 | 54 | 0 | TPRG1 |
| SE_02_053200218 | chr3:189291911-189326031 |
34120 | 218 | 18 | 924 | 59 | 4 | 153 | 320 | TPRG1,TPRG1-AS2 |
| SE_02_053200188 | chr3:189748062-189812832 |
64770 | 188 | 14 | 1734 | 23 | 9 | 219 | 159 | TP63,MIR944 |
| SE_02_053200124 | chr3:190301827-190370098 |
68271 | 124 | 27 | 2163 | 501 | 3 | 176 | 525 | CLDN1,CLDN16 |
| SE_02_053200156 | chr3:192590952-192616862 |
25910 | 156 | 6 | 719 | 39 | 8 | 52 | 0 | FGF12 |
| SE_02_053200184 | chr3:192879035-192916518 |
37483 | 184 | 14 | 1170 | 280 | 5 | 94 | 0 | MB21D2 |
| SE_02_053200121 | chr3:196136257-196151132 |
14875 | 121 | 5 | 482 | 130 | 4 | 5 | 394 | LINC00885 |
| SE_02_053200371 | chr3:196740306-196755426 |
15120 | 371 | 5 | 467 | 298 | 2 | 16 | 3 | PAK2,CEP19,PIGX,RNU6-42P |
| SE_02_053200141 | chr3:196774283-196793868 |
19585 | 141 | 9 | 652 | 185 | 0 | 16 | 47 | RNU6-42P,PAK2 |
| SE_02_053200161 | chr3:4711139-4722545 |
11406 | 161 | 5 | 403 | 13 | 0 | 62 | 93 | ITPR1,EGOT |
| SE_02_053200320 | chr3:4744133-4787058 |
42925 | 320 | 12 | 1436 | 66 | 11 | 232 | 867 | ITPR1,EGOT |
| SE_02_053200076 | chr3:4847504-4898670 |
51166 | 76 | 18 | 1595 | 152 | 2 | 151 | 268 | BHLHE40-AS1,ITPR1 |
| SE_02_053200297 | chr3:4975690-4985804 |
10114 | 297 | 6 | 266 | 6 | 3 | 222 | 671 | BHLHE40-AS1,BHLHE40 |
| SE_02_053200083 | chr3:66408416-66499710 |
91294 | 83 | 31 | 2904 | 435 | 10 | 469 | 412 | LRIG1 |
| SE_02_053200189 | chr4:105550460-105589165 |
38705 | 189 | 8 | 1089 | 308 | 3 | 107 | 215 | ARHGEF38-IT1,ARHGEF38 |
| SE_02_053200020 | chr4:115625720-115687118 |
61398 | 20 | 30 | 1777 | 22 | 3 | 76 | 0 | NDST4 |
| SE_02_053200328 | chr4:138896796-138916816 |
20020 | 328 | 6 | 523 | 28 | 4 | 42 | 0 | NOCT |
| SE_02_053200054 | chr4:37449663-37501299 |
51636 | 54 | 19 | 1345 | 257 | 1 | 85 | 334 | C4ORF19 |
| SE_02_053200249 | chr4:40188856-40202846 |
13990 | 249 | 5 | 476 | 91 | 1 | 32 | 106 | RHOH |
| SE_02_053200311 | chr4:40439165-40481041 |
41876 | 311 | 18 | 1067 | 27 | 6 | 60 | 54 | RBM47,MIR4802 |
| SE_02_053200263 | chr4:6747245-6780791 |
33546 | 263 | 14 | 1209 | 67 | 0 | 35 | 0 | BLOC1S4,KIAA0232,MRFAP1L1 |
| SE_02_053200197 | chr5:112878576-112930272 |
51696 | 197 | 14 | 1552 | 932 | 4 | 54 | 703 | SRP19,REEP5,DCP2 |
| SE_02_053200113 | chr5:112955925-113011209 |
55284 | 113 | 22 | 1865 | 701 | 6 | 84 | 491 | DCP2,REEP5 |
| SE_02_053200198 | chr5:118004866-118026107 |
21241 | 198 | 8 | 588 | 23 | 0 | 62 | 0 | LOC102467224,HNCAT21 |
| SE_02_053200133 | chr5:139636846-139676016 |
39170 | 133 | 19 | 866 | 228 | 1 | 532 | 202 | CXXC5 |
| SE_02_053200201 | chr5:150487969-150513065 |
25096 | 201 | 6 | 721 | 129 | 0 | 76 | 220 | NDST1,RPS14,LOC102546298 |
| SE_02_053200171 | chr5:155067873-155092900 |
25027 | 171 | 8 | 728 | 98 | 3 | 61 | 0 | KIF4B |
| SE_02_053200219 | chr5:168315626-168367695 |
52069 | 219 | 18 | 1440 | 94 | 8 | 111 | 0 | WWC1 |
| SE_02_053200093 | chr5:173292221-173332471 |
40250 | 93 | 14 | 1158 | 30 | 4 | 201 | 1329 | STC2,MIR8056 |
| SE_02_053200155 | chr5:173470344-173515652 |
45308 | 155 | 13 | 1228 | 151 | 3 | 40 | 0 | LOC285593 |
| SE_02_053200358 | chr5:173561353-173573105 |
11752 | 358 | 5 | 318 | 93 | 6 | 16 | 0 | LOC285593,BOD1 |
| SE_02_053200360 | chr5:173866398-173903391 |
36993 | 360 | 6 | 883 | 179 | 6 | 273 | 465 | CPEB4 |
| SE_02_053200003 | chr5:35052677-35320624 |
267947 | 3 | 125 | 7430 | 712 | 31 | 512 | 1482 | PRLR,AGXT2 |
| SE_02_053200298 | chr5:35338011-35373655 |
35644 | 298 | 9 | 1021 | 111 | 3 | 53 | 0 | PRLR |
| SE_02_053200074 | chr5:35436400-35484630 |
48230 | 74 | 13 | 1338 | 177 | 2 | 40 | 0 | SPEF2 |
| SE_02_053200029 | chr5:42572761-42657225 |
84464 | 29 | 41 | 2132 | 580 | 1 | 213 | 52 | GHR |
| SE_02_053200096 | chr5:43385885-43447936 |
62051 | 96 | 20 | 1587 | 1769 | 9 | 43 | 412 | CCL28,C5ORF28 |
| SE_02_053200372 | chr5:55957481-55994795 |
37314 | 372 | 13 | 976 | 156 | 1 | 52 | 295 | IL6ST,FLJ31104 |
| SE_02_053200033 | chr5:56386433-56476961 |
90528 | 33 | 31 | 2490 | 408 | 18 | 215 | 0 | LOC102467147 |
| SE_02_053200056 | chr5:56812267-56900936 |
88669 | 56 | 42 | 2307 | 1803 | 22 | 347 | 1340 | MAP3K1,SETD9 |
| SE_02_053200276 | chr5:58179714-58192136 |
12422 | 276 | 3 | 341 | 17 | 7 | 14 | 0 | LOC101928569 |
| SE_02_053200323 | chr5:58441070-58462651 |
21581 | 323 | 4 | 624 | 112 | 2 | 129 | 653 | PLK2,GAPT |
| SE_02_053200344 | chr5:68531325-68549284 |
17959 | 344 | 5 | 474 | 28 | 0 | 97 | 0 | PIK3R1 |
| SE_02_053200204 | chr5:80466180-80494482 |
28302 | 204 | 12 | 653 | 321 | 0 | 44 | 369 | ZFYVE16,FAM151B |
| SE_02_053200374 | chr6:10140119-10166516 |
26397 | 374 | 13 | 731 | 82 | 6 | 119 | 44 | TFAP2A-AS1 |
| SE_02_053200068 | chr6:10399603-10430214 |
30611 | 68 | 10 | 777 | 57 | 1 | 347 | 1570 | TFAP2A,TFAP2A-AS1,LINC00518,MIR5689 |
| SE_02_053200013 | chr6:12267795-12355801 |
88006 | 13 | 26 | 2427 | 172 | 7 | 246 | 586 | EDN1 |
| SE_02_053200355 | chr6:12409093-12421515 |
12422 | 355 | 6 | 292 | 6 | 0 | 29 | 0 | EDN1 |
| SE_02_053200213 | chr6:12480276-12505771 |
25495 | 213 | 10 | 699 | 12 | 3 | 54 | 0 | EDN1 |
| SE_02_053200140 | chr6:12709492-12733223 |
23731 | 140 | 5 | 609 | 11 | 2 | 113 | 181 | PHACTR1 |
| SE_02_053200101 | chr6:12812203-12853385 |
41182 | 101 | 17 | 1058 | 102 | 5 | 80 | 0 | PHACTR1 |
| SE_02_053200295 | chr6:149054388-149088557 |
34169 | 295 | 17 | 892 | 322 | 2 | 120 | 395 | UST,LOC100128176,TAB2 |
| SE_02_053200016 | chr6:151613486-151716397 |
102911 | 16 | 38 | 2873 | 171 | 73 | 170 | 589 | CCDC170,ESR1 |
| SE_02_053200288 | chr6:16985590-17015274 |
29684 | 288 | 13 | 851 | 73 | 1 | 90 | 0 | STMND1 |
| SE_02_053200072 | chr6:17386550-17423525 |
36975 | 72 | 20 | 1054 | 178 | 4 | 0 | 232 | CAP2 |
| SE_02_053200191 | chr6:26047421-26068867 |
21446 | 191 | 4 | 621 | 722 | 9 | 28 | 178 | HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A |
| SE_02_053200339 | chr6:27891048-27903814 |
12766 | 339 | 7 | 390 | 777 | 7 | 33 | 316 | HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B |
| SE_02_053200150 | chr6:34531515-34555014 |
23499 | 150 | 16 | 731 | 208 | 2 | 97 | 1628 | PACSIN1,SPDEF |
| SE_02_053200258 | chr6:42214989-42230390 |
15401 | 258 | 9 | 452 | 409 | 6 | 43 | 506 | MRPS10,TRERF1,GUCA1B |
| SE_02_053200151 | chr6:53282031-53340624 |
58593 | 151 | 20 | 1562 | 481 | 2 | 50 | 689 | ELOVL5,RPS16P5,MIR5685 |
| SE_02_053200199 | chr6:7129956-7148455 |
18499 | 199 | 11 | 468 | 31 | 5 | 127 | 0 | RREB1 |
| SE_02_053200370 | chr6:7519364-7554838 |
35474 | 370 | 15 | 972 | 205 | 3 | 106 | 271 | DSP,SNRNP48 |
| SE_02_053200278 | chr6:96171493-96202275 |
30782 | 278 | 16 | 860 | 244 | 2 | 27 | 0 | FUT9,UFL1 |
| SE_02_053200253 | chr7:110381637-110408810 |
27173 | 253 | 15 | 714 | 35 | 7 | 42 | 0 | EIF3IP1,LRRN3 |
| SE_02_053200353 | chr7:128431576-128459431 |
27855 | 353 | 13 | 669 | 1069 | 1 | 21 | 357 | HILPDA,METTL2B,IMPDH1 |
| SE_02_053200305 | chr7:140300699-140326363 |
25664 | 305 | 9 | 678 | 84 | 2 | 22 | 0 | SLC37A3 |
| SE_02_053200089 | chr7:143117396-143153500 |
36104 | 89 | 15 | 942 | 229 | 4 | 8 | 292 | PIP,TAS2R39 |
| SE_02_053200308 | chr7:14632926-14642666 |
9740 | 308 | 8 | 286 | 2 | 0 | 37 | 0 | DGKB,ETV1 |
| SE_02_053200157 | chr7:16770894-16815144 |
44250 | 157 | 22 | 1386 | 485 | 12 | 130 | 620 | AGR2,TSPAN13 |
| SE_02_053200290 | chr7:16843690-16861403 |
17713 | 290 | 5 | 627 | 262 | 4 | 31 | 73 | AGR3,AGR2 |
| SE_02_053200070 | chr7:16875598-16929579 |
53981 | 70 | 23 | 1784 | 250 | 7 | 39 | 53 | AGR3 |
| SE_02_053200178 | chr7:26183961-26213207 |
29246 | 178 | 11 | 1217 | 150 | 0 | 234 | 1320 | HNRNPA2B1,CBX3,NFE2L3 |
| SE_02_053200242 | chr7:26793009-26806877 |
13868 | 242 | 6 | 420 | 745 | 0 | 8 | 0 | SKAP2 |
| SE_02_053200228 | chr7:30285843-30351510 |
65667 | 228 | 11 | 1745 | 219 | 0 | 65 | 108 | MIR550A1,ZNRF2,MIR550B1,LINC01176,DKFZP586I1420 |
| SE_02_053200022 | chr7:34020247-34075742 |
55495 | 22 | 19 | 1363 | 72 | 9 | 242 | 249 | BMPER |
| SE_02_053200232 | chr7:36390530-36448777 |
58247 | 232 | 15 | 1454 | 471 | 4 | 105 | 728 | ANLN,KIAA0895 |
| SE_02_053200215 | chr7:47576876-47607367 |
30491 | 215 | 9 | 930 | 77 | 0 | 65 | 143 | TNS3,LINC01447,C7ORF65 |
| SE_02_053200117 | chr7:5411563-5430189 |
18626 | 117 | 12 | 565 | 13 | 0 | 264 | 908 | TNRC18 |
| SE_02_053200135 | chr7:70709728-70752650 |
42922 | 135 | 27 | 1312 | 32 | 11 | 82 | 0 | AUTS2,WBSCR17 |
| SE_02_053200225 | chr7:73739312-73747833 |
8521 | 225 | 4 | 213 | 158 | 0 | 26 | 0 | ABHD11,MIR4284,STX1A,ABHD11-AS1,CLDN3 |
| SE_02_053200273 | chr7:73822877-73834070 |
11193 | 273 | 5 | 285 | 330 | 1 | 38 | 947 | CLDN4,WBSCR27,WBSCR28 |
| SE_02_053200221 | chr7:76281026-76319687 |
38661 | 221 | 13 | 1266 | 1215 | 2 | 134 | 2078 | SRRM3,HSPB1,YWHAG |
| SE_02_053200284 | chr7:7970461-8005015 |
34554 | 284 | 15 | 1039 | 139 | 2 | 119 | 40 | GLCCI1,LOC100505921 |
| SE_02_053200332 | chr7:80807005-80870246 |
63241 | 332 | 14 | 1761 | 62 | 7 | 127 | 126 | SEMA3C |
| SE_02_053200280 | chr7:80916681-80926205 |
9524 | 280 | 4 | 275 | 9 | 0 | 56 | 201 | SEMA3C |
| SE_02_053200123 | chr7:93893253-93927669 |
34416 | 123 | 11 | 1029 | 191 | 3 | 75 | 415 | GNGT1,GNG11,TFPI2 |
| SE_02_053200187 | chr8:101359392-101392744 |
33352 | 187 | 11 | 911 | 9 | 2 | 23 | 316 | NACAP1 |
| SE_02_053200005 | chr8:101423630-101635706 |
212076 | 5 | 91 | 5897 | 279 | 20 | 388 | 725 | GRHL2 |
| SE_02_053200001 | chr8:115406913-115714517 |
307604 | 1 | 189 | 7220 | 312 | 16 | 2218 | 1325 | TRPS1 |
| SE_02_053200004 | chr8:115759467-115904581 |
145114 | 4 | 43 | 3442 | 113 | 11 | 620 | 0 | TRPS1 |
| SE_02_053200154 | chr8:115927652-115943748 |
16096 | 154 | 5 | 344 | 18 | 0 | 83 | 0 | TRPS1 |
| SE_02_053200175 | chr8:115961138-115999365 |
38227 | 175 | 17 | 943 | 42 | 1 | 167 | 194 | LINC00536,TRPS1 |
| SE_02_053200206 | chr8:116078207-116121280 |
43073 | 206 | 17 | 1000 | 47 | 1 | 174 | 55 | LINC00536 |
| SE_02_053200110 | chr8:11712144-11747234 |
35090 | 110 | 11 | 1201 | 1777 | 4 | 133 | 0 | GATA4,FDFT1,C8ORF49,NEIL2 |
| SE_02_053200302 | chr8:123528464-123548363 |
19899 | 302 | 8 | 551 | 102 | 3 | 116 | 350 | FBXO32 |
| SE_02_053200345 | chr8:124463139-124492659 |
29520 | 345 | 7 | 730 | 306 | 1 | 119 | 1018 | RNF139,RNF139-AS1,TATDN1,MIR6844,TRMT12,NDUFB9 |
| SE_02_053200261 | chr8:127799181-127820432 |
21251 | 261 | 12 | 567 | 34 | 2 | 13 | 0 | MIR1204 |
| SE_02_053200145 | chr8:127833967-127871856 |
37889 | 145 | 16 | 1102 | 55 | 2 | 57 | 93 | MIR1204,PVT1 |
| SE_02_053200075 | chr8:128127701-128178403 |
50702 | 75 | 15 | 1507 | 41 | 6 | 147 | 72 | MIR1208 |
| SE_02_053200316 | chr8:27675030-27704517 |
29487 | 316 | 11 | 824 | 492 | 3 | 36 | 126 | MIR3622A,SCARA3,MIR3622B |
| SE_02_053200209 | chr8:29737660-29784774 |
47114 | 209 | 18 | 1305 | 55 | 1 | 118 | 103 | LOC101929450,LINC00589,LOC101929470 |
| SE_02_053200231 | chr8:40344460-40392214 |
47754 | 231 | 15 | 1344 | 264 | 17 | 108 | 0 | C8ORF4,IDO2 |
| SE_02_053200115 | chr8:66089767-66130401 |
40634 | 115 | 14 | 1066 | 280 | 1 | 66 | 426 | DNAJC5B,TRIM55,CRH |
| SE_02_053200055 | chr8:66512568-66582353 |
69785 | 55 | 17 | 1781 | 152 | 2 | 232 | 776 | C8ORF46,MYBL1 |
| SE_02_053200310 | chr8:68686870-68714710 |
27840 | 310 | 4 | 745 | 10 | 0 | 40 | 65 | C8ORF34,C8ORF34-AS1 |
| SE_02_053200105 | chr8:68729296-68772575 |
43279 | 105 | 23 | 1219 | 34 | 1 | 90 | 0 | C8ORF34,LINC01592 |
| SE_02_053200095 | chr8:68829047-68875450 |
46403 | 95 | 18 | 1321 | 42 | 2 | 66 | 0 | LINC01592 |
| SE_02_053200272 | chr8:91599976-91631761 |
31785 | 272 | 19 | 798 | 2 | 7 | 130 | 0 | SLC26A7 |
| SE_02_053200073 | chr8:95084905-95153593 |
68688 | 73 | 23 | 1739 | 858 | 5 | 56 | 186 | PLEKHF2,MIR3150B,MIR3150A |
| SE_02_053200256 | chr9:105908375-105916005 |
7630 | 256 | 2 | 214 | 24 | 1 | 63 | 0 | TMEM38B |
| SE_02_053200270 | chr9:107269922-107337056 |
67134 | 270 | 17 | 1895 | 207 | 7 | 139 | 915 | RAD23B |
| SE_02_053200331 | chr9:111035477-111050912 |
15435 | 331 | 4 | 429 | 48 | 2 | 32 | 394 | LPAR1 |
| SE_02_053200330 | chr9:111897238-111922513 |
25275 | 330 | 15 | 761 | 270 | 0 | 43 | 102 | UGCG,MIR4668 |
| SE_02_053200130 | chr9:114611791-114625634 |
13843 | 130 | 5 | 390 | 160 | 3 | 27 | 218 | C9ORF91,ATP6V1G1 |
| SE_02_053200210 | chr9:120681793-120713017 |
31224 | 210 | 20 | 774 | 465 | 3 | 136 | 80 | MEGF9 |
| SE_02_053200052 | chr9:12701056-12729616 |
28560 | 52 | 8 | 875 | 320 | 5 | 94 | 231 | TYRP1,LURAP1L-AS1,LURAP1L |
| SE_02_053200347 | chr9:127561407-127585962 |
24555 | 347 | 10 | 681 | 528 | 2 | 100 | 304 | FAM129B,STXBP1 |
| SE_02_053200015 | chr9:12772056-12829549 |
57493 | 15 | 14 | 1857 | 202 | 5 | 185 | 378 | LURAP1L,LURAP1L-AS1 |
| SE_02_053200271 | chr9:127956005-127978478 |
22473 | 271 | 13 | 599 | 354 | 0 | 0 | 0 | FAM102A,ST6GALNAC4,PIP5KL1,DPM2 |
| SE_02_053200203 | chr9:12901110-12934410 |
33300 | 203 | 13 | 1337 | 12 | 1 | 49 | 0 | LURAP1L-AS1 |
| SE_02_053200170 | chr9:129480961-129497274 |
16313 | 170 | 8 | 450 | 42 | 0 | 69 | 419 | LINC00963 |
| SE_02_053200028 | chr9:13021860-13095633 |
73773 | 28 | 29 | 2314 | 128 | 6 | 141 | 0 | MPDZ |
| SE_02_053200363 | chr9:131372889-131405339 |
32450 | 363 | 12 | 914 | 155 | 1 | 54 | 146 | PRRC2B |
| SE_02_053200319 | chr9:137607834-137615903 |
8069 | 319 | 5 | 290 | 174 | 0 | 59 | 814 | ARRDC1-AS1,ARRDC1,ZMYND19,DPH7,EHMT1 |
| SE_02_053200160 | chr9:14310173-14349613 |
39440 | 160 | 11 | 1079 | 17 | 1 | 364 | 191 | NFIB |
| SE_02_053200162 | chr9:73936295-73982526 |
46231 | 162 | 27 | 1131 | 5 | 1 | 0 | 0 | LOC101927358,RORB |
| SE_02_053200333 | chr9:94991172-95028139 |
36967 | 333 | 13 | 928 | 161 | 1 | 134 | 569 | C9ORF3,MIR6081 |
| SE_02_053200315 | chrX:12971326-12989852 |
18526 | 315 | 7 | 388 | 84 | 0 | 0 | 283 | TMSB4X,TLR8-AS1 |
| SE_02_053200043 | chrX:16562950-16634110 |
71160 | 43 | 29 | 1329 | 93 | 1 | 66 | 405 | MIR548AM,CTPS2,S100G |
| SE_02_053200366 | chrX:16659261-16671476 |
12215 | 366 | 6 | 281 | 31 | 0 | 47 | 114 | CTPS2,MIR548AM,S100G,SYAP1 |
| SE_02_053200077 | chrX:9996081-10064449 |
68368 | 77 | 33 | 1433 | 44 | 4 | 0 | 175 | WWC3,CLDN34 |
SE annotation visualization
Information description of sample and annotation
| Case ID: | Name:GSM2862201 |
| Input ID: | Name:GSM2862196 |
| Common SNP: | dbSNP |
| eQTL: | GTEx, HaploReg v4.1, PancanQTL |
| Risk SNP : | GWAS Catalog, GWASdb v2.0 |
| TFBS: | TFBS Conserved of UCSC |
| CRISPR/Cas9 target site: | CRISPR Targets of UCSC |
Software and parameters used
| Read Mapping: | bowtie(v2.4.4) -p 10 -x -S -U |
| Peak Calling: | macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto |
| Stitching Distance: | 12.5 kb |
| TSS Exclusive Zone: | +/- 2 kb |