SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000235831
Gene: BHLHE40-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:4896809-4980414 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900608 chr3:4789622-4901433 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 608 45 3451 97 12 470 1147 BHLHE40-AS1,ITPR1,EGOT
SE_02_139100067 chr3:4795507-4907469 Sample_02_1391 Peripheral blood FE-PD_ALK- 67 18 3465 116 9 476 1122 BHLHE40-AS1,ITPR1,EGOT
SE_02_045600015 chr3:4804081-4910012 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 15 25 3295 121 8 473 963 BHLHE40-AS1,ITPR1
SE_02_109300238 chr3:4821736-4898548 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 238 15 2405 71 5 297 410 BHLHE40-AS1,ITPR1
SE_02_109200262 chr3:4847467-4902807 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 262 13 1718 43 3 163 372 BHLHE40-AS1,ITPR1
SE_02_053200076 chr3:4847504-4898670 Sample_02_0532 Mammary gland T47D 76 18 1595 34 2 151 268 BHLHE40-AS1,ITPR1
SE_02_108800299 chr3:4847532-4898444 Sample_02_1088 Mammary gland T47D_shCtrl_45min 299 9 1592 34 2 151 245 BHLHE40-AS1,ITPR1
SE_02_108700332 chr3:4847579-4902850 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 332 13 1719 43 3 162 365 BHLHE40-AS1,ITPR1
SE_02_080900377 chr3:4847612-4898487 Sample_02_0809 Mammary gland T47D Serum 377 5 1589 34 2 151 244 BHLHE40-AS1,ITPR1
SE_02_123400268 chr3:4847613-4898433 Sample_02_1234 Mammary gland T47D_Full 268 15 1588 34 2 151 240 BHLHE40-AS1,ITPR1
SE_02_108600499 chr3:4866966-4898256 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 499 8 955 20 2 108 177 BHLHE40-AS1
SE_02_087500520 chr3:4885164-4909433 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 520 6 710 43 3 78 371 BHLHE40-AS1
SE_02_149200398 chr3:4887707-4906539 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 398 5 545 32 1 51 352 BHLHE40-AS1
SE_02_104300573 chr3:4955829-5027961 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 573 37 2243 53 6 403 671 BHLHE40-AS1,BHLHE40
SE_02_104200728 chr3:4956916-4987246 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 728 6 935 17 4 251 671 BHLHE40-AS1,BHLHE40
SE_02_104900447 chr3:4961310-5028693 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 447 43 2093 51 6 399 671 BHLHE40-AS1,BHLHE40
SE_02_122900043 chr3:4961862-5056275 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 43 40 3015 58 7 433 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_104601250 chr3:4961891-5034785 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1250 20 2262 50 6 405 671 BHLHE40-AS1,BHLHE40
SE_02_109900007 chr3:4962670-5060322 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 7 43 3133 56 7 461 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_04_000100364 chr3:4962833-5027581 Sample_04_0001 Blood heat shocked K562 364 12 2015 47 6 399 671 BHLHE40-AS1,BHLHE40
SE_02_126600081 chr3:4963069-4996268 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 81 7 1001 24 5 276 671 BHLHE40-AS1,BHLHE40
SE_04_000200070 chr3:4963103-5039249 Sample_04_0002 Blood cold shocked K562 70 13 2392 50 7 414 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_054500029 chr3:4963222-5024932 Sample_02_0545 Bone marrow K562 WT 29 17 1900 44 6 373 671 BHLHE40-AS1,BHLHE40
SE_02_126500023 chr3:4963355-5029498 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 23 9 2069 49 6 399 671 BHLHE40-AS1,BHLHE40
SE_02_113000012 chr3:4963383-5038805 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 12 23 2368 49 7 414 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_132800624 chr3:4963384-4995124 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 624 9 949 22 5 270 671 BHLHE40-AS1,BHLHE40
SE_02_111600119 chr3:4963425-4997438 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 119 12 1031 26 5 284 671 BHLHE40-AS1,BHLHE40
SE_02_098700003 chr3:4963456-5060715 Sample_02_0987 Blood K562_Control_1 3 32 3125 56 7 465 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_058000925 chr3:4963497-5039107 Sample_02_0580 Blood HEL_sgSIK3e4 925 28 2374 49 7 414 671 BHLHE40-AS1,BHLHE40
SE_02_057600938 chr3:4963599-5038874 Sample_02_0576 Blood HEL_sgLKB1e2 938 29 2366 49 7 414 671 BHLHE40-AS1,BHLHE40
SE_02_127300066 chr3:4963601-5028058 Sample_02_1273 Cervix HeLa 66 8 2013 47 6 399 671 BHLHE40-AS1,BHLHE40
SE_02_088200515 chr3:4963753-4996373 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 515 8 987 24 5 277 671 BHLHE40-AS1,BHLHE40
SE_02_103300088 chr3:4963841-5024069 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 88 16 1868 44 6 373 671 BHLHE40-AS1,BHLHE40
SE_02_135600459 chr3:4963886-4995412 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 459 5 949 22 5 276 671 BHLHE40-AS1,BHLHE40
SE_02_087900600 chr3:4963937-4995849 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 600 7 958 22 5 276 671 BHLHE40-AS1,BHLHE40
SE_02_057900932 chr3:4964006-5038835 Sample_02_0579 Blood HEL_sgNeg2 932 27 2355 49 7 414 671 BHLHE40-AS1,BHLHE40
SE_02_138900199 chr3:4965711-4996377 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 199 5 920 24 5 277 671 BHLHE40-AS1,BHLHE40
SE_02_104700622 chr3:4965717-5029239 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 622 20 1991 49 6 399 671 BHLHE40-AS1,BHLHE40
SE_02_138700011 chr3:4965807-5071816 Sample_02_1387 Peripheral blood Mac-1_ALK- 11 19 3500 64 7 488 671 BHLHE40-AS1,BHLHE40
SE_02_103400294 chr3:4965819-5038781 Sample_02_1034 Blood AML cell 294 18 2293 49 7 414 671 BHLHE40-AS1,BHLHE40
SE_02_085300144 chr3:4965828-4989863 Sample_02_0853 Mammary gland MCF7L-TamR 144 4 748 17 4 251 671 BHLHE40-AS1,BHLHE40
SE_02_139200014 chr3:4965861-5072251 Sample_02_1392 Peripheral blood Mac-2A_ALK- 14 20 3522 65 7 488 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_127600391 chr3:4965938-4996145 Sample_02_1276 Prostate PC3_GSK126 391 12 904 24 5 276 671 BHLHE40-AS1,BHLHE40
SE_02_111900356 chr3:4966015-5039837 Sample_02_1119 Blood KBM7 356 39 2318 50 7 415 671 BHLHE40-AS1,BHLHE40
SE_02_133000180 chr3:4966023-5059579 Sample_02_1330 Blood AMU-AML1 180 25 3005 55 7 459 671 BHLHE40-AS1,BHLHE40
SE_02_076800110 chr3:4966351-5027900 Sample_02_0768 Ovary SKOV3 110 33 1919 47 6 399 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_02_078400045 chr3:4972107-5035282 Sample_02_0784 Blood OSU-CLL 45 25 1930 48 6 405 671 BHLHE40-AS1,BHLHE40
SE_02_088100357 chr3:4972200-4996253 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 357 6 671 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_152400302 chr3:4972332-4995585 Sample_02_1524 Lung H3122 DMSO 302 11 636 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_078200242 chr3:4972355-5027122 Sample_02_0782 Blood MEC1 242 17 1643 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_067200074 chr3:4972359-4996141 Sample_02_0672 Endometrium endometrium cancer_DSG 74 8 658 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_088000352 chr3:4972430-4996280 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 352 6 667 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_081700077 chr3:4972462-4995627 Sample_02_0817 Ovary Epithelial ovarian cancer 77 5 636 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_087800568 chr3:4972505-4996061 Sample_02_0878 Ovary SVOG3e cells_noDox_control 568 6 653 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_081800690 chr3:4972704-4995736 Sample_02_0818 Ovary High-grade serous ovarian cancer 690 6 632 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_078300223 chr3:4972726-5028915 Sample_02_0783 Blood MEC2 223 17 1714 46 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_067400061 chr3:4972732-4995785 Sample_02_0674 Endometrium E1_FA 61 12 631 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_098900232 chr3:4972820-4997251 Sample_02_0989 Kidney kidney cortex_WT 232 6 689 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_149200001 chr3:4972823-5082353 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1 13 3641 64 6 491 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_01_010500250 chr3:4972839-4995837 Sample_01_0105 Thyroid gland thyroid gland_54y 250 7 633 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_142900692 chr3:4972875-5011511 Sample_02_1429 Blood GM12878_WT 692 9 1143 30 4 316 671 BHLHE40-AS1,BHLHE40,ARL8B,AC018816.3
SE_02_045600092 chr3:4972909-5039944 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 92 17 2068 48 6 415 671 BHLHE40-AS1,BHLHE40
SE_02_088300383 chr3:4972943-4996142 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 383 7 646 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_087500002 chr3:4972951-5082473 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 2 22 3647 64 6 491 671 BHLHE40-AS1,BHLHE40,ARL8B,ITPR1,EDEM1
SE_02_139100127 chr3:4972964-5061804 Sample_02_1391 Peripheral blood FE-PD_ALK- 127 19 2835 56 6 465 671 BHLHE40-AS1,BHLHE40
SE_02_122700277 chr3:4972978-4987587 Sample_02_1227 Bone marrow U266 277 2 402 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_122400796 chr3:4972998-4989037 Sample_02_1224 Bone marrow normal plasma cell 796 7 453 10 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_109300415 chr3:4973010-4987495 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 415 6 401 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_047400331 chr3:4973012-4996419 Sample_02_0474 Fibroblast umbilical cord Fibroblast 331 8 656 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_01_010100063 chr3:4973022-4995476 Sample_01_0101 Pancreas pancreas_54y 63 5 622 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_157900027 chr3:4973028-5027680 Sample_02_1579 Renal 786-M1A 27 8 1668 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_081000259 chr3:4973031-4987341 Sample_02_0810 Mammary gland T47D noSerum 259 10 399 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_072900531 chr3:4973058-4989099 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 531 9 454 10 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_081900149 chr3:4973066-4996776 Sample_02_0819 Ovary Mucinous ovarian cancer 149 5 671 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_082700346 chr3:4973082-4990053 Sample_02_0827 Stomach normal gastric 346 8 489 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_158200021 chr3:4973083-5027973 Sample_02_1582 Renal OS-RC-2 21 12 1677 45 5 399 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_082600110 chr3:4973084-5026885 Sample_02_0826 Stomach gastric tumor 110 40 1623 44 5 394 671 BHLHE40-AS1,BHLHE40
SE_02_076200329 chr3:4973085-5027764 Sample_02_0762 Podocyte podocyte_CTL 329 13 1668 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_077000310 chr3:4973092-5026974 Sample_02_0770 Ovary OVCA429_shLuc 310 26 1623 44 5 396 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_01_010700020 chr3:4973152-5027278 Sample_01_0107 Esophagus esophagus squamous epithelium 20 10 1640 44 5 398 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_098800001 chr3:4973167-5060774 Sample_02_0988 Blood K562_EPZ 1 32 2783 54 6 465 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_134300006 chr3:4973220-5020044 Sample_02_1343 Leukophereses leukophereses_p195 6 11 1405 41 5 335 671 BHLHE40-AS1,BHLHE40
SE_02_073000661 chr3:4973443-4986896 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 661 7 367 9 3 225 671 BHLHE40-AS1,BHLHE40
SE_02_151100033 chr3:4973554-5027739 Sample_02_1511 Lung H3122_untreated 33 15 1651 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_080900262 chr3:4974914-4999732 Sample_02_0809 Mammary gland T47D Serum 262 2 726 25 4 290 671 BHLHE40-AS1,BHLHE40
SE_02_045300049 chr3:4974924-5029056 Sample_02_0453 Neuroblastoma SJNB3 49 12 1664 46 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_145800022 chr3:4974997-5039289 Sample_02_1458 Pancreas THP1+PANC1_shNC 22 25 1990 48 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_103601500 chr3:4975023-4992742 Sample_02_1036 Mammary gland HCC70_XY018 1500 7 500 17 3 256 671 BHLHE40-AS1,BHLHE40
SE_02_103501288 chr3:4975030-4995131 Sample_02_1035 Mammary gland HCC70_Vehicle 1288 13 552 20 4 270 671 BHLHE40-AS1,BHLHE40
SE_02_108700349 chr3:4975079-4987349 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 349 4 335 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_076600165 chr3:4975146-5000037 Sample_02_0766 Ovary PEO1 165 11 721 25 4 290 671 BHLHE40-AS1,BHLHE40
SE_02_048100607 chr3:4975277-4998507 Sample_02_0481 Mammary gland MDA-MB231 607 8 670 24 4 288 671 BHLHE40-AS1,BHLHE40
SE_02_089100314 chr3:4975399-4995444 Sample_02_0891 Heart left ventricle_LV1202 314 4 551 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_053300662 chr3:4975407-4998404 Sample_02_0533 Blood vessel Circle of Willis_54y 662 10 666 24 4 285 671 BHLHE40-AS1,BHLHE40
SE_02_125600033 chr3:4975410-5030334 Sample_02_1256 Pancreatic duct pancreatic ductal epithelium cell 33 9 1682 47 5 404 671 BHLHE40-AS1,BHLHE40
SE_02_075900450 chr3:4975454-4989423 Sample_02_0759 Ovary BIN-67_Control 450 3 397 15 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_058600056 chr3:4975498-5038081 Sample_02_0586 Chordal patient-derived chordoma MGH_4 56 15 1941 47 6 411 671 BHLHE40-AS1,BHLHE40
SE_02_045400168 chr3:4975522-5027186 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 168 21 1557 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_050200017 chr3:4975522-5058757 Sample_02_0502 Blood HL-60_PMA_16h 17 28 2644 53 6 452 671 BHLHE40-AS1,BHLHE40
SE_02_065900047 chr3:4975530-5028133 Sample_02_0659 Lung H23 47 20 1608 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_078000136 chr3:4975554-4997336 Sample_02_0780 Liver SMMC-7721 136 5 612 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_109200401 chr3:4975559-4987440 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 401 6 321 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_090300221 chr3:4975560-4995566 Sample_02_0903 Heart left ventricle_DCM_LV1009 221 4 545 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_093700065 chr3:4975564-4995821 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 65 3 553 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_099100618 chr3:4975567-4998128 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 618 10 652 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_133200247 chr3:4975571-5032121 Sample_02_1332 Blood Monomac6_CTRL 247 15 1717 47 5 404 671 BHLHE40-AS1,BHLHE40
SE_01_009400224 chr3:4975580-4997132 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 224 4 602 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_108800391 chr3:4975586-4995046 Sample_02_1088 Mammary gland T47D_shCtrl_45min 391 7 532 20 4 267 671 BHLHE40-AS1,BHLHE40
SE_02_109000276 chr3:4975587-4987297 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 276 7 319 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_090600139 chr3:4975602-4995594 Sample_02_0906 Heart left ventricle_DCM_LV1072 139 4 543 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_083300057 chr3:4975610-5039953 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 57 13 1987 48 6 415 671 BHLHE40-AS1,BHLHE40
SE_02_045700031 chr3:4975622-5027104 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 31 16 1549 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_082200182 chr3:4975626-5027006 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 182 13 1546 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_127800685 chr3:4975627-4995365 Sample_02_1278 Chordoma UCH1_DMSO_48h 685 3 537 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_125800166 chr3:4975646-4995691 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 166 4 547 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_01_009700126 chr3:4975676-4996751 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 126 3 585 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_053200297 chr3:4975690-4985804 Sample_02_0532 Mammary gland T47D 297 6 266 8 3 222 671 BHLHE40-AS1,BHLHE40
SE_02_103000066 chr3:4975692-5028045 Sample_02_1030 Colon DKO 66 20 1596 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_090400135 chr3:4975695-4995742 Sample_02_0904 Heart left ventricle_DCM_LV1028 135 4 546 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_129700147 chr3:4975713-5016637 Sample_02_1297 Lung lung 147 15 1228 37 5 331 671 BHLHE40-AS1,BHLHE40
SE_02_123400343 chr3:4975717-4989323 Sample_02_1234 Mammary gland T47D_Full 343 5 378 13 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_088800141 chr3:4975730-4995452 Sample_02_0888 Heart left ventricle_LV1160 141 3 538 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_083400220 chr3:4975738-5038878 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 220 14 1949 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_126400018 chr3:4975741-5029099 Sample_02_1264 Bone Im-GCT-4072_G34W KO 18 9 1636 47 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_130100279 chr3:4975742-5018096 Sample_02_1301 Blood PER-117 279 15 1267 40 5 332 671 BHLHE40-AS1,BHLHE40
SE_02_108301008 chr3:4975756-4989612 Sample_02_1083 Macula macula 1008 3 392 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_153800122 chr3:4975773-4996737 Sample_02_1538 Mammary gland MDA-MB-231 122 3 583 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_090700258 chr3:4975776-4995663 Sample_02_0907 Heart left ventricle_DCM_LV1223 258 4 543 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_130800059 chr3:4975781-4995673 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 59 2 543 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_050100281 chr3:4975785-4987374 Sample_02_0501 Blood HL-60_CTRL 281 4 314 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_04_001000012 chr3:4975798-5028068 Sample_04_0010 Lung A549 TGFb 12 6 1596 45 5 399 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_061700150 chr3:4975805-5038603 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 150 14 1941 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_083500214 chr3:4975809-5021041 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 214 20 1361 41 5 342 671 BHLHE40-AS1,BHLHE40
SE_02_108200375 chr3:4975825-4989470 Sample_02_1082 Retina retina 375 4 382 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_083600216 chr3:4975827-5039096 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 216 21 1953 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_120100120 chr3:4975830-4989783 Sample_02_1201 Brain GBM37 120 5 397 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_091100273 chr3:4975831-4995398 Sample_02_0911 Heart left ventricle_DCM_LV1290 273 4 535 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_138600050 chr3:4975833-5026934 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 50 14 1539 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_057400812 chr3:4975837-4995086 Sample_02_0574 Blood MOLM-13_sgNeg2 812 6 526 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_134500188 chr3:4975837-5037288 Sample_02_1345 Leukophereses leukophereses_p358 188 29 1901 47 6 405 671 BHLHE40-AS1,BHLHE40
SE_02_090000257 chr3:4975839-4995568 Sample_02_0900 Heart left ventricle_LV1452 257 4 538 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_146000168 chr3:4975840-5038164 Sample_02_1460 Blood Mutz-3 168 17 1929 47 6 411 671 BHLHE40-AS1,BHLHE40
SE_02_108600338 chr3:4975841-4987309 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 338 3 313 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_091200373 chr3:4975841-4995482 Sample_02_0912 Heart left ventricle_DCM_LV1300 373 3 536 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_088900303 chr3:4975844-4995667 Sample_02_0889 Heart left ventricle_LV1183 303 3 542 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_091500149 chr3:4975845-4995617 Sample_02_0915 Heart left ventricle_DCM_LV1371 149 3 539 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_113200184 chr3:4975850-5027674 Sample_02_1132 Pancreas KLM1 wt 184 29 1582 45 5 399 671 BHLHE40-AS1,BHLHE40,ARL8B
SE_02_109100281 chr3:4975853-4985458 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 281 6 255 7 3 219 671 BHLHE40-AS1,BHLHE40
SE_02_108900260 chr3:4975853-4987288 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 260 4 313 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_102800146 chr3:4975857-4980761 Sample_02_1028 Blood HL-60_WT 146 1 142 2 2 129 286 BHLHE40-AS1,BHLHE40
SE_02_061400046 chr3:4975857-5039504 Sample_02_0614 Liposarcoma MLPS_T2 46 21 1966 48 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_152300152 chr3:4975867-4989219 Sample_02_1523 Lung A549 DMSO 152 6 369 12 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_090200221 chr3:4975875-4995455 Sample_02_0902 Heart left ventricle_LV1558 221 4 532 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_142400070 chr3:4975884-4997288 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 70 8 600 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_061300184 chr3:4975887-4998071 Sample_02_0613 Liposarcoma MLPS_T1 184 12 640 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_044500386 chr3:4975889-5038768 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 386 18 1941 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_057800556 chr3:4975899-4987414 Sample_02_0578 Blood MOLM-13_sgSIK3e4 556 6 310 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_089900071 chr3:4975900-4995412 Sample_02_0899 Heart left ventricle_LV1400 71 6 531 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_120500767 chr3:4975905-4995843 Sample_02_1205 Brain NB3 767 7 542 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_149300668 chr3:4975910-4989805 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 668 8 393 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_091700268 chr3:4975911-4995538 Sample_02_0917 Heart left ventricle_DCM_LV1433 268 7 532 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_089800187 chr3:4975911-4996166 Sample_02_0898 Heart left ventricle_LV1356 187 5 556 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_093800013 chr3:4975920-4996460 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 13 5 564 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_057500679 chr3:4975931-4987518 Sample_02_0575 Blood MOLM13_sgLKB1e2 679 4 308 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_01_009800248 chr3:4975931-4995323 Sample_01_0098 Heart left ventricle_51y 248 2 526 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_141000347 chr3:4975934-4995808 Sample_02_1410 Brain GSC6 347 3 538 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_04_000600121 chr3:4975940-4995963 Sample_04_0006 Lung A549 GFP control 121 5 547 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_081500191 chr3:4975942-4996102 Sample_02_0815 Mammary gland SUM159PT 191 4 552 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_093600015 chr3:4975943-4996602 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 15 7 569 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_145900121 chr3:4975946-5038812 Sample_02_1459 Pancreas THP1+PANC1_shCTCF 121 16 1938 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_091600297 chr3:4975947-4995398 Sample_02_0916 Heart left ventricle_DCM_LV1392 297 4 528 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_102100073 chr3:4975956-4996334 Sample_02_1021 Mammary gland SUM159R 73 8 563 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_046500606 chr3:4975961-4995886 Sample_02_0465 Adipose subcutaneous adipocytes 606 10 544 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_088700233 chr3:4975970-4995466 Sample_02_0887 Heart left ventricle_LV1121 233 4 529 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_142700038 chr3:4975970-5039045 Sample_02_1427 Shoulder fibroblast_343 38 12 1945 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_076000221 chr3:4975972-4996208 Sample_02_0760 Ovary BIN-67_SMARCA4 221 4 558 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_117400095 chr3:4975979-4995888 Sample_02_1174 Brain GBM02 95 7 544 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_044700185 chr3:4975980-5038532 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 185 25 1932 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_090500277 chr3:4975981-4995446 Sample_02_0905 Heart left ventricle_DCM_LV1033 277 5 528 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_105600125 chr3:4975982-4996301 Sample_02_1056 Esophagus ChTRT 125 2 561 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_153500073 chr3:4975983-4996668 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 73 4 570 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_064000115 chr3:4975984-4996270 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 115 7 561 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_126700036 chr3:4975988-4997073 Sample_02_1267 Bone Im-GCT-4072_G34W 36 7 585 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_090800450 chr3:4975992-4995718 Sample_02_0908 Heart left ventricle_DCM_LV1262 450 6 536 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_142200049 chr3:4975993-4997233 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 49 8 594 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_00_005200168 chr3:4975999-4995672 Sample_00_0052 Heart left ventricle 3y 168 8 534 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_119500320 chr3:4976001-4996273 Sample_02_1195 Brain GBM29 320 8 561 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_099300933 chr3:4976002-4987491 Sample_02_0993 Blood MOLM-13_empty 933 6 307 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_089600186 chr3:4976008-4995671 Sample_02_0896 Heart left ventricle_LV1294 186 3 534 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_153700085 chr3:4976013-4996666 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 85 6 570 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_158100034 chr3:4976018-5027665 Sample_02_1581 Renal OS-LM1 34 14 1574 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_091000492 chr3:4976019-4996226 Sample_02_0910 Heart left ventricle_DCM_LV1275 492 6 559 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_129600133 chr3:4976019-5001583 Sample_02_1296 Perigastric lymph node Perigastric lymph node 133 8 736 25 4 296 671 BHLHE40-AS1,BHLHE40
SE_02_136700027 chr3:4976021-5027583 Sample_02_1367 Pancreas Capan1-untreated 27 15 1569 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_080800210 chr3:4976023-5027635 Sample_02_0808 Ovary RMG1_ARID1A KO 210 29 1572 45 5 399 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_01_010300058 chr3:4976039-4995131 Sample_01_0103 Pancreas pancreas_37y 58 4 518 20 4 270 671 BHLHE40-AS1,BHLHE40
SE_02_118700307 chr3:4976048-4995866 Sample_02_1187 Brain GBM16 307 9 541 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_064300058 chr3:4976048-4996688 Sample_02_0643 Mammary gland MDA-MB-436 58 8 570 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_049200080 chr3:4976054-5028148 Sample_02_0492 Pharyng Detroit 562_LPS 80 13 1592 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_091900180 chr3:4976060-4995646 Sample_02_0919 Heart left ventricle_DCM_LV1532 180 4 531 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_089700392 chr3:4976070-4995082 Sample_02_0897 Heart left ventricle_LV1325 392 4 517 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_090100200 chr3:4976072-4996135 Sample_02_0901 Heart left ventricle_LV1471 200 6 551 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_105700158 chr3:4976077-4996262 Sample_02_1057 Esophagus GihTRT 158 3 559 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_061100349 chr3:4976086-4995799 Sample_02_0611 Liposarcoma DDLPS_T1 349 11 536 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_061200113 chr3:4976089-5038806 Sample_02_0612 Liposarcoma DDLPS_T2 113 17 1936 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_092000240 chr3:4976103-4989868 Sample_02_0920 Heart left ventricle_DCM_LV1535 240 3 392 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_118600163 chr3:4976104-4995899 Sample_02_1186 Brain GBM15 163 5 543 21 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_091300277 chr3:4976106-4995842 Sample_02_0913 Heart left ventricle_DCM_LV1304 277 6 538 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_129900051 chr3:4976116-5027571 Sample_02_1299 Liver liver 51 24 1568 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_00_005500212 chr3:4976120-4987567 Sample_00_0055 Spleen spleen 34y 212 6 306 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_091800221 chr3:4976129-4995418 Sample_02_0918 Heart left ventricle_DCM_LV1437 221 4 525 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_090900247 chr3:4976138-4995676 Sample_02_0909 Heart left ventricle_DCM_LV1264 247 5 531 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_070300053 chr3:4976148-5027060 Sample_02_0703 Pancreas PATU8988S WT 53 9 1533 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_049100113 chr3:4976150-5027759 Sample_02_0491 Pharyng Detroit 562-Control 113 10 1573 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_089400177 chr3:4976164-4995404 Sample_02_0894 Heart left ventricle_LV1248 177 4 524 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_124200540 chr3:4976166-4987551 Sample_02_1242 Skin UISO_virus_negative 540 7 305 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_089000185 chr3:4976172-4995062 Sample_02_0890 Heart left ventricle_LV1200 185 4 515 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_091400248 chr3:4976176-4995484 Sample_02_0914 Heart left ventricle_DCM_LV1342 248 7 525 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_134700151 chr3:4976189-4987549 Sample_02_1347 Leukophereses leukophereses_p401 151 3 304 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_146900126 chr3:4976201-4995867 Sample_02_1469 Umbilical Vein HUVEC 126 6 538 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_120000153 chr3:4976201-4996239 Sample_02_1200 Brain GBM36 153 6 555 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_126900080 chr3:4976203-4996088 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 80 4 546 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_074800158 chr3:4976204-4995480 Sample_02_0748 Mammary gland HCC1599_WO 158 3 524 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_081600063 chr3:4976210-5038006 Sample_02_0816 Ovary Clear cell ovarian cancer 63 20 1914 47 6 410 671 BHLHE40-AS1,BHLHE40
SE_02_157300435 chr3:4976211-5027026 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 435 20 1531 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_061900059 chr3:4976219-5027646 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 59 13 1568 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_131800350 chr3:4976236-4988822 Sample_02_1318 Brain hMGLs_SORL1-A528T 350 5 345 10 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_118500299 chr3:4976237-4995972 Sample_02_1185 Brain GBM14 299 5 542 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_086700153 chr3:4976245-5029430 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 153 31 1632 47 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_142800179 chr3:4976247-4996065 Sample_02_1428 Shoulder fibroblast_316 179 3 544 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_112900328 chr3:4976252-4995207 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 328 9 517 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_00_004600195 chr3:4976253-4995090 Sample_00_0046 Heart right ventricle_34y 195 8 513 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_070900316 chr3:4976259-4996032 Sample_02_0709 Pancreas hT85_organoid 316 9 543 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_089200265 chr3:4976261-4995464 Sample_02_0892 Heart left ventricle_LV1215 265 4 523 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_131500407 chr3:4976266-4989652 Sample_02_1315 Brain hMGLs_INPP5D SNP 407 4 378 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_119400258 chr3:4976282-4995894 Sample_02_1194 Brain GBM28 258 8 538 21 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_156000497 chr3:4976286-4989981 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 497 6 390 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_046000506 chr3:4976294-4987600 Sample_02_0460 Blood ME-1_I-10-49_6h 506 4 302 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_047500039 chr3:4976294-5027074 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 39 14 1531 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_117500033 chr3:4976295-5031612 Sample_02_1175 Brain GBM03 33 16 1686 47 5 404 671 BHLHE40-AS1,BHLHE40
SE_02_153900088 chr3:4976298-5027659 Sample_02_1539 Nasopharyngeal C666-1 88 31 1568 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_064500017 chr3:4976309-5027631 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 17 14 1565 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_089300295 chr3:4976320-4995531 Sample_02_0893 Heart left ventricle_LV1226 295 5 523 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_136600009 chr3:4976334-5027253 Sample_02_1366 Pancreas BxPC3-untreated 9 22 1540 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_130900202 chr3:4976336-4995602 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 202 3 524 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_126300189 chr3:4976337-4997056 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 189 7 578 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_082100157 chr3:4976337-5038645 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 157 14 1925 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_076900224 chr3:4976352-5026995 Sample_02_0769 Ovary HEYA8 224 33 1526 44 5 396 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_02_138100376 chr3:4976354-4997283 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 376 12 588 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_109400033 chr3:4976355-4995613 Sample_02_1094 Embryo H9_0Dox 33 3 524 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_094900520 chr3:4976356-4996232 Sample_02_0949 Umbilical artery HUAEC_WT 520 10 552 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_083700250 chr3:4976362-5039009 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 250 19 1937 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_135300086 chr3:4976363-4996438 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 86 2 555 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_105200127 chr3:4976364-4996070 Sample_02_1052 Esophagus JH-EsoAd1 127 8 542 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_095000389 chr3:4976369-4995772 Sample_02_0950 Umbilical vein HUVEC_WT 389 11 528 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_158000031 chr3:4976369-5027935 Sample_02_1580 Renal 786-O 31 19 1576 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_142500090 chr3:4976370-4995708 Sample_02_1425 Shoulder fibroblast_384 90 8 527 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_136500168 chr3:4976371-4997397 Sample_02_1365 Pancreas AsPC1-untreated 168 5 593 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_138200240 chr3:4976371-5027746 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 240 19 1568 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_072000041 chr3:4976372-5027593 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 41 20 1563 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_129800108 chr3:4976375-5000775 Sample_02_1298 Hilar lymph node Hilar lymph node 108 9 704 25 4 292 671 BHLHE40-AS1,BHLHE40
SE_02_094800027 chr3:4976376-5027737 Sample_02_0948 Pharyng Detroit562 27 9 1566 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_083000250 chr3:4976379-4997430 Sample_02_0830 Lung H1703 SMARCA2-infected 250 3 592 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_119900063 chr3:4976380-4996099 Sample_02_1199 Brain GBM35 63 4 542 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_137200018 chr3:4976381-5027547 Sample_02_1372 Pancreas PSN1-untreated 18 24 1558 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_071100236 chr3:4976382-4995567 Sample_02_0711 Pancreas hN35_organoid 236 10 521 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_070500156 chr3:4976384-4997464 Sample_02_0705 Pancreas AsPC1 WT 156 5 597 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_089500118 chr3:4976385-4989776 Sample_02_0895 Heart left ventricle_LV1259 118 3 379 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_142600244 chr3:4976385-4995907 Sample_02_1426 Shoulder fibroblast_341 244 7 535 21 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_139000128 chr3:4976385-5027056 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 128 11 1527 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_058800068 chr3:4976386-5027533 Sample_02_0588 Cervix HeLa Kyoto_untreated 68 22 1558 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_151400260 chr3:4976393-4995504 Sample_02_1514 Lung Differentiated AT1-like cells 260 5 520 20 4 276 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_062000170 chr3:4976397-4995173 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 170 7 512 20 4 274 671 BHLHE40-AS1,BHLHE40
SE_01_010400471 chr3:4976408-4987673 Sample_01_0104 Lung upper lobe of left lung 471 5 302 10 3 249 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_116600059 chr3:4976409-5027925 Sample_02_1166 Biliary H69_TGF beta_16h_1 59 10 1575 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_01_011500052 chr3:4976410-5029260 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 52 15 1624 47 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_152500190 chr3:4976412-4995637 Sample_02_1525 Stomach N87 DMSO 190 5 522 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_135200134 chr3:4976413-4996525 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 134 3 555 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_105400147 chr3:4976413-4996848 Sample_02_1054 Esophagus SKGT4 147 8 571 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_103800036 chr3:4976419-5027756 Sample_02_1038 Pharynx FaDu LPS 36 13 1564 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_071300061 chr3:4976420-5027053 Sample_02_0713 Pancreas BxPC3_sgTP63 61 19 1524 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_082900305 chr3:4976422-4996949 Sample_02_0829 Lung H1703 SMARCA4-infected 305 3 568 23 4 281 671 BHLHE40-AS1,BHLHE40
SE_02_045900127 chr3:4976426-5038634 Sample_02_0459 Blood ME-1_DMSO_6h 127 21 1920 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_151300420 chr3:4976429-4995068 Sample_02_1513 Lung Transitional AT2->1 cells 420 3 506 20 4 269 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_139300082 chr3:4976429-5027702 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 82 11 1563 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_102000196 chr3:4976430-4995568 Sample_02_1020 Mammary gland SUM159 196 4 518 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_119100192 chr3:4976431-4995830 Sample_02_1191 Brain GBM25 192 7 526 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_143000184 chr3:4976432-5012526 Sample_02_1430 Blood Kasumi-3_mock-infected 184 8 1066 33 4 329 671 BHLHE40-AS1,BHLHE40
SE_02_134800434 chr3:4976434-4987485 Sample_02_1348 Leukophereses leukophereses_p408 434 5 295 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_126100047 chr3:4976437-4996371 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 47 6 550 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_085700478 chr3:4976438-4996200 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 478 4 545 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_126000091 chr3:4976443-4996233 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 91 6 547 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_066000213 chr3:4976444-5027495 Sample_02_0660 Mammary gland MCF10DCIS 213 15 1553 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_045500119 chr3:4976447-5027128 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 119 26 1525 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_116900047 chr3:4976447-5028044 Sample_02_1169 Biliary H69_TGF beta_16h_2 47 8 1574 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_092200689 chr3:4976448-4989766 Sample_02_0922 Heart fetal heart_PCW10_12434 689 5 376 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_083200119 chr3:4976451-4996242 Sample_02_0832 Umblical vein HUVECs_TNF30min 119 13 547 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_135400088 chr3:4976452-4996409 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 88 2 550 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_066100326 chr3:4976461-4996176 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 326 10 543 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_117700350 chr3:4976462-4995771 Sample_02_1177 Brain GBM05 350 5 524 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_152600433 chr3:4976463-4996340 Sample_02_1526 Lung PC9 DMSO 433 6 550 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_099200309 chr3:4976465-4997635 Sample_02_0992 Mammary gland MDA-MB-231_Par 309 8 606 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_070700016 chr3:4976465-5027001 Sample_02_0707 Pancreas BxPC3 WT 16 28 1522 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_153400448 chr3:4976475-4996456 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 448 4 551 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_071200083 chr3:4976476-5027045 Sample_02_0712 Pancreas BxPC3_sgNEG 83 17 1524 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_123000192 chr3:4976478-4996354 Sample_02_1230 Lung PC9 192 6 550 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_073100582 chr3:4976479-4987529 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 582 5 295 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_135100174 chr3:4976482-4996317 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 174 2 550 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_067000068 chr3:4976484-4995600 Sample_02_0670 Mammary gland breast cancer FA 68 6 519 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_071700218 chr3:4976486-4996180 Sample_02_0717 Pancreas HPAFII_GFP_DOX 218 6 543 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_130500024 chr3:4976487-5026990 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 24 17 1521 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_072200044 chr3:4976494-5027005 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 44 21 1522 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_143700944 chr3:4976499-4998592 Sample_02_1437 Liver LSEC-TNF 944 6 637 24 4 288 671 BHLHE40-AS1,BHLHE40
SE_02_131600450 chr3:4976504-4989725 Sample_02_1316 Brain hMGLs_TREM2-R47H 450 6 376 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_149600238 chr3:4976506-4990128 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 238 8 389 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_137300082 chr3:4976510-4996203 Sample_02_1373 Pancreas PANC1-untreated 82 11 544 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_113100198 chr3:4976512-5027046 Sample_02_1131 Pancreas T3M4 wt 198 24 1523 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_097700371 chr3:4976524-4995642 Sample_02_0977 Brain 2089_H3.3K27WT 371 7 518 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_125900073 chr3:4976526-4996221 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 73 5 546 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_067100116 chr3:4976526-4996984 Sample_02_0671 Mammary gland breast cancer_DSG 116 7 570 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_143800956 chr3:4976531-4997094 Sample_02_1438 Liver LSEC 956 3 572 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_134900113 chr3:4976533-5022625 Sample_02_1349 Leukophereses leukophereses_p411 113 14 1391 41 5 356 671 BHLHE40-AS1,BHLHE40
SE_04_000900210 chr3:4976549-4995869 Sample_04_0009 Lung A549 210 4 530 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_01_010900307 chr3:4976551-4989964 Sample_01_0109 Colon transverse colon_54y 307 4 381 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_112500245 chr3:4976562-4987230 Sample_02_1125 Adipose visceral adipose_CS_VC06 245 6 289 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_126200008 chr3:4976564-5027601 Sample_02_1262 Bone Im-GCT-3504_G34W 8 12 1558 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_136200261 chr3:4976567-5027076 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 261 18 1524 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_143600945 chr3:4976579-4996862 Sample_02_1436 Liver LSEC-Ctrl 945 4 564 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_138800452 chr3:4976583-4995681 Sample_02_1388 Peripheral blood JB6_ALK+ 452 4 518 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_151200321 chr3:4976584-4989039 Sample_02_1512 Lung Purified AT2 cells 321 6 343 10 3 250 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_070800085 chr3:4976591-5026901 Sample_02_0708 Pancreas hF3 organoid 85 29 1515 44 5 394 671 BHLHE40-AS1,BHLHE40
SE_02_136000874 chr3:4976613-5027043 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 874 16 1520 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_058900349 chr3:4976629-4995494 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 349 11 513 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_131400236 chr3:4976630-4989839 Sample_02_1314 Brain hMGLs_TREM2-KO 236 7 375 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_092100837 chr3:4976630-4996906 Sample_02_0921 Heart embryonic heart_CS22 837 10 564 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_113300413 chr3:4976632-4995878 Sample_02_1133 Liver Hepatic stellate cells 413 4 527 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_076300114 chr3:4976636-5027760 Sample_02_0763 Podocyte podocyte_DEX 114 8 1560 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_082000358 chr3:4976639-5038605 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 358 13 1916 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_00_004700325 chr3:4976644-4987461 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 325 7 288 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_071800238 chr3:4976644-4997419 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 238 6 583 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_048700095 chr3:4976646-4987250 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 95 2 284 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_064700005 chr3:4976655-5027602 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 5 17 1553 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_054600045 chr3:4976658-5024095 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 45 18 1430 42 5 373 671 BHLHE40-AS1,BHLHE40
SE_02_092400533 chr3:4976661-4989774 Sample_02_0924 Heart fetal heart_PCW10_12569 533 6 370 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_072400234 chr3:4976663-4997381 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 234 8 583 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_156900879 chr3:4976668-4995475 Sample_02_1569 Endothelial Endothelial cells 879 3 509 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_116700690 chr3:4976674-4995414 Sample_02_1167 Biliary H69_TGF Vehicle_1 690 6 508 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_149400268 chr3:4976682-4989999 Sample_02_1494 Other monocyte-derived dendritic cells_0h 268 5 377 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_095400168 chr3:4976691-4995586 Sample_02_0954 Brain H3.3K27WT_2192 168 4 511 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_136100296 chr3:4976692-5027041 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 296 16 1517 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_01_011000498 chr3:4976694-4996126 Sample_01_0110 Aorta thoracic aorta_37y 498 10 533 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_092500513 chr3:4976695-4989839 Sample_02_0925 Heart fetal heart_PCW17_12570 513 5 372 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_048200133 chr3:4976700-4979310 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 133 1 76 2 2 107 14 BHLHE40-AS1,BHLHE40
SE_02_113600071 chr3:4976708-4996291 Sample_02_1136 Bone U2OS-anaphase/telophase 71 4 542 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_131300310 chr3:4976715-4989320 Sample_02_1313 Brain hMGLs_CD33_SNP 310 5 349 13 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_122000064 chr3:4976716-4989839 Sample_02_1220 Bone marrow JJN3 64 3 372 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_102900239 chr3:4976719-5027903 Sample_02_1029 Colon HCT116 239 24 1562 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_137600078 chr3:4976723-5027579 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 78 19 1549 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_138000062 chr3:4976724-4997135 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 62 14 568 23 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_149500096 chr3:4976725-4987291 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 96 6 285 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_147100087 chr3:4976726-5027553 Sample_02_1471 Blood Outgrowth Endothelia BOEC 87 13 1548 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_141500326 chr3:4976727-4996214 Sample_02_1415 Brain DIPGIV 326 7 538 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_085200284 chr3:4976729-4987454 Sample_02_0852 Mammary gland MCF7L-P 284 3 286 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_115900284 chr3:4976729-4987454 Sample_02_1159 Mammary gland MCF7 284 3 286 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_064600018 chr3:4976732-5027262 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 18 15 1530 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_118800195 chr3:4976733-4995763 Sample_02_1188 Brain GBM18 195 6 516 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_153200051 chr3:4976734-5027597 Sample_02_1532 Mammary gland MCF10A 51 11 1551 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_096300225 chr3:4976736-4995582 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 225 2 510 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_138300350 chr3:4976739-4997203 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 350 9 572 23 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_147000116 chr3:4976740-4996761 Sample_02_1470 Umbilical Vein H441 116 6 555 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_088400062 chr3:4976740-5027695 Sample_02_0884 Colon LoVo 62 14 1555 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_065200015 chr3:4976742-5027499 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 15 16 1545 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_156600510 chr3:4976746-4996559 Sample_02_1566 Dermal Dermal fibroblast 510 6 544 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_044400601 chr3:4976746-5038890 Sample_02_0444 Bone osteosarcoma tumor P10 601 23 1919 47 6 414 671 BHLHE40-AS1,BHLHE40
SE_02_056200173 chr3:4976750-4995060 Sample_02_0562 Lung A549_Dex-treated 173 8 498 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_116800815 chr3:4976751-4995608 Sample_02_1168 Biliary H69_TGF Vehicle_2 815 6 511 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_111100175 chr3:4976753-5028054 Sample_02_1111 Other HGrC1_SMAD2/3KO 175 18 1567 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_077100970 chr3:4976755-4996803 Sample_02_0771 Ovary OVCA429_shGRHL2 970 12 558 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_105500146 chr3:4976756-4995653 Sample_02_1055 Esophagus KYAE1 146 3 513 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_048400138 chr3:4976758-4987313 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 138 3 285 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_137000539 chr3:4976758-4987591 Sample_02_1370 Pancreas Patu8902-untreated 539 5 288 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_112800483 chr3:4976763-4987251 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 483 5 282 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_093500064 chr3:4976769-4995650 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 64 7 512 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_048300108 chr3:4976773-4986890 Sample_02_0483 Bone marrow HSCe_22y_CD34+,CD38-,Lineage- 108 3 269 9 3 225 671 BHLHE40-AS1,BHLHE40
SE_02_156801039 chr3:4976775-4996283 Sample_02_1568 Heart Cardiac progenitor cells 1039 6 541 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_093000267 chr3:4976776-5027031 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 267 34 1516 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_083100455 chr3:4976777-4995933 Sample_02_0831 Umblical vein HUVECs_TNF0min 455 10 525 21 4 276 671 BHLHE40-AS1,BHLHE40
SE_01_010600070 chr3:4976779-4995735 Sample_01_0106 Adrenal gland adrenal gland 54y 70 7 516 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_153300334 chr3:4976782-4989040 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 334 5 339 10 3 250 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_118400263 chr3:4976784-4995842 Sample_02_1184 Brain GBM13 263 9 519 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_052100085 chr3:4976785-5032102 Sample_02_0521 Colon SW480 85 14 1682 47 5 404 671 BHLHE40-AS1,BHLHE40
SE_02_126800023 chr3:4976789-4996427 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 23 6 541 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_119200160 chr3:4976792-4995718 Sample_02_1192 Brain GBM26 160 8 515 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_123200203 chr3:4976796-4995608 Sample_02_1232 Lung PC9_siMED13L-2 203 8 510 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_044800585 chr3:4976797-4996002 Sample_02_0448 Bone MNNG 585 8 526 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_092900093 chr3:4976798-5037859 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 93 27 1890 47 6 406 671 BHLHE40-AS1,BHLHE40
SE_02_120400923 chr3:4976803-4987532 Sample_02_1204 Brain NB2 923 5 286 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_096600350 chr3:4976806-4995796 Sample_02_0966 Brain H3.3K27M_JN29-BS3 350 6 515 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_046600839 chr3:4976810-4995850 Sample_02_0466 Adipose visceral adipocytes 839 7 516 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_071500108 chr3:4976812-5027073 Sample_02_0715 Pancreas SUIT2_TP63dN 108 19 1514 44 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_084600786 chr3:4976814-4997211 Sample_02_0846 Mammary gland MDA-MB-231_untreat 786 7 570 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_074900396 chr3:4976815-4995299 Sample_02_0749 Mammary gland HCC1599_GSI 396 4 501 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_119700324 chr3:4976817-4995719 Sample_02_1197 Brain GBM33 324 8 513 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_044000208 chr3:4976819-4996287 Sample_02_0440 Bone LM7 208 9 537 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_127900613 chr3:4976820-4996886 Sample_02_1279 Bone Mesenchymal stem cells 613 4 556 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_095300199 chr3:4976821-4995670 Sample_02_0953 Brain H3.3K27M_1840 199 2 510 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_103700055 chr3:4976824-5027170 Sample_02_1037 Pharynx FaDu Control 55 15 1514 44 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_143400051 chr3:4976824-5046618 Sample_02_1434 Trophoblast trophoblast stem cells 51 11 2181 50 6 420 671 BHLHE40-AS1,BHLHE40
SE_02_053000243 chr3:4976826-5026957 Sample_02_0530 Mammary gland MCF10A 243 18 1507 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_131200265 chr3:4976829-4987516 Sample_02_1312 Brain hMGLs_WT 265 3 283 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_064400033 chr3:4976829-4995742 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 33 6 512 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_101700162 chr3:4976831-5032879 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 162 14 1697 47 5 405 671 BHLHE40-AS1,BHLHE40
SE_02_125400007 chr3:4976832-5027570 Sample_02_1254 Bladder Bladder tumor Basal1 7 14 1544 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_048900114 chr3:4976835-4984724 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 114 2 207 5 3 196 631 BHLHE40-AS1,BHLHE40
SE_02_105000525 chr3:4976837-4996860 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 525 9 555 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_137100027 chr3:4976838-5027037 Sample_02_1371 Pancreas Patu899S-untreated 27 15 1511 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_139800066 chr3:4976841-5031950 Sample_02_1398 Bone U2OS_siNC 66 22 1673 47 5 404 671 BHLHE40-AS1,BHLHE40
SE_02_075500098 chr3:4976843-5027498 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 98 14 1540 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_04_000800159 chr3:4976844-4995536 Sample_04_0008 Lung A549 shRNA control 159 4 505 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_047700455 chr3:4976845-4997356 Sample_02_0477 Colon intestinal epithelial organoids_139a 455 9 573 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_01_009300496 chr3:4976847-4996106 Sample_01_0093 Aorta ascending aorta 496 3 526 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_154100052 chr3:4976849-5027768 Sample_02_1541 Nasopharyngeal HNE1 52 28 1551 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_153600228 chr3:4976851-4996776 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 228 4 552 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_122800704 chr3:4976853-4996233 Sample_02_1228 Mammary gland MDA-MB-231_2 704 6 534 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_141600297 chr3:4976855-4996496 Sample_02_1416 Brain SF9402 297 3 539 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_137700168 chr3:4976856-4996303 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 168 9 536 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_113900230 chr3:4976856-4997121 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 230 6 563 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_055900049 chr3:4976859-5026422 Sample_02_0559 iPSCs FX52 iPSCs dC-T 49 13 1489 43 5 373 671 BHLHE40-AS1,BHLHE40
SE_02_074700487 chr3:4976860-4989884 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 487 5 368 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_056100148 chr3:4976861-4995070 Sample_02_0561 Lung A549_1 148 7 493 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_058500332 chr3:4976866-4996072 Sample_02_0585 Umbilical vein HUVEC 0hour 332 8 524 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_111500148 chr3:4976870-4997297 Sample_02_1115 Liver HepG2 148 6 571 24 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_143500021 chr3:4976870-5027559 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 21 7 1543 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_048500083 chr3:4976872-4979348 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 83 1 70 2 2 110 23 BHLHE40-AS1,BHLHE40
SE_02_155900505 chr3:4976874-4989911 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 505 5 368 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_00_005800119 chr3:4976878-4987524 Sample_00_0058 Stomach stomach 34y 119 7 282 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_158400198 chr3:4976878-4996651 Sample_02_1584 Brain U87 GBM_Mock 198 5 544 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_045200523 chr3:4976879-4996628 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 523 7 543 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_047800525 chr3:4976880-4989629 Sample_02_0478 Colon normal colon mucosa 525 8 359 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_101600151 chr3:4976881-5027614 Sample_02_1016 Embryo H9_Mesendoderm_24h 151 15 1546 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_049000066 chr3:4976882-4979238 Sample_02_0490 Bone marrow HSCe_68y_CD34+,CD38-,Lineage- 66 2 68 2 2 103 1 BHLHE40-AS1,BHLHE40
SE_02_131700387 chr3:4976885-4987423 Sample_02_1317 Brain hMGLs_SORL1-KO 387 4 281 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_01_009900155 chr3:4976885-4989520 Sample_01_0099 Colon transverse colon 155 5 353 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_119600628 chr3:4976886-4995842 Sample_02_1196 Brain GBM32 628 6 514 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_079600077 chr3:4976887-4996264 Sample_02_0796 Brain 2229 77 6 536 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_102500113 chr3:4976887-5027390 Sample_02_1025 Esophagus KYSE150 113 17 1534 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_04_000500121 chr3:4976888-4995421 Sample_04_0005 Lung A549 FOXA2 overexpressed 121 4 502 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_137500139 chr3:4976889-4996146 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 139 9 528 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_123300201 chr3:4976890-4995870 Sample_02_1233 Lung PC9_miR-4497 mimic 201 8 518 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_137900103 chr3:4976892-4996396 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 103 11 537 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_047600802 chr3:4976895-4995639 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 802 6 506 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_056000122 chr3:4976895-4997164 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 122 6 564 23 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_137800517 chr3:4976896-4996645 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 517 10 544 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_151000134 chr3:4976896-5028161 Sample_02_1510 Lung H3122_LR_Pano 134 32 1569 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_147200181 chr3:4976900-4996064 Sample_02_1472 Fetal lung IMR-90 181 5 524 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_00_005100220 chr3:4976904-4995878 Sample_00_0051 Adrenal gland adrenal gland 30y 220 14 518 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_00_005700192 chr3:4976905-4995064 Sample_00_0057 Heart right ventricle 3y 192 12 493 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_111000245 chr3:4976905-4996928 Sample_02_1110 Other HGrC1 245 9 555 23 4 280 671 BHLHE40-AS1,BHLHE40
SE_02_071000262 chr3:4976906-4989162 Sample_02_0710 Pancreas hN34_organoid 262 8 337 12 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_081100342 chr3:4976906-4996332 Sample_02_0811 Thyroid BCPAP 342 5 537 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_155300812 chr3:4976907-4989818 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 812 5 366 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_118300207 chr3:4976907-4995849 Sample_02_1183 Brain GBM12 207 8 514 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_122300869 chr3:4976909-4987688 Sample_02_1223 Bone marrow KMS28BM 869 4 286 10 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_120200641 chr3:4976909-4995761 Sample_02_1202 Brain GBM38 641 6 511 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_050600340 chr3:4976909-5027602 Sample_02_0506 Esophagus TE5_1 340 18 1546 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_048000092 chr3:4976909-5027641 Sample_02_0480 Gingival epithelial HGEP 92 17 1547 45 5 399 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_02_051700337 chr3:4976909-5027671 Sample_02_0517 Esophagus TE5 337 18 1549 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_155600208 chr3:4976912-4990418 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 208 7 384 15 3 256 671 BHLHE40-AS1,BHLHE40
SE_02_092300566 chr3:4976914-4990024 Sample_02_0923 Heart fetal heart_PCW10_12522 566 5 371 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_111300321 chr3:4976914-4996854 Sample_02_1113 Bone U2OS 321 6 554 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_115600288 chr3:4976916-4989724 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 288 6 362 15 3 251 671 BHLHE40-AS1,BHLHE40
SE_02_064800045 chr3:4976916-5027614 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 45 17 1545 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_048800053 chr3:4976917-4987181 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 53 3 273 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_123100258 chr3:4976918-4995735 Sample_02_1231 Lung PC9_siMED13L-1 258 6 510 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_094100217 chr3:4976918-4995798 Sample_02_0941 Brain T98G 217 8 511 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_064900012 chr3:4976918-5027605 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 12 17 1545 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_060900178 chr3:4976918-5027616 Sample_02_0609 Liposarcoma LPS141 178 18 1545 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_056700105 chr3:4976920-4986925 Sample_02_0567 Mammary gland MCF7L-P_TAMR 105 5 264 9 3 225 671 BHLHE40-AS1,BHLHE40
SE_02_072100055 chr3:4976923-5026979 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 55 21 1507 44 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_119800352 chr3:4976926-4989092 Sample_02_1198 Brain GBM34 352 6 334 10 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_043800127 chr3:4976929-5027553 Sample_02_0438 Bone HOS 127 23 1542 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_102600063 chr3:4976931-5027718 Sample_02_1026 Esophagus KYSE200 63 26 1549 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_00_005600401 chr3:4976932-4995874 Sample_00_0056 Sigmoid colon sigmoid colon 3y 401 8 517 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_137400160 chr3:4976939-4996271 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 160 9 535 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_01_011400348 chr3:4976942-4996333 Sample_01_0114 Colon HCT116_encode 348 5 536 22 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_044100061 chr3:4976942-5029084 Sample_02_0441 Bone M112 61 24 1600 47 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_086800757 chr3:4976944-4996207 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 757 14 531 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_155401146 chr3:4976946-4987520 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 1146 5 281 9 3 249 671 BHLHE40-AS1,BHLHE40
SE_02_151900279 chr3:4976947-4995449 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 279 7 501 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_054700069 chr3:4976947-4997162 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 69 6 563 23 4 284 671 BHLHE40-AS1,BHLHE40
SE_02_061600083 chr3:4976947-5027640 Sample_02_0616 Liposarcoma liposarcoma cells_LP6 83 19 1546 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_085600565 chr3:4976948-4995679 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 565 3 508 20 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_064200071 chr3:4976953-4996581 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 71 7 540 23 4 277 671 BHLHE40-AS1,BHLHE40
SE_02_152000299 chr3:4976958-4995437 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 299 8 501 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_043700040 chr3:4976959-5027047 Sample_02_0437 Bone 143B 40 30 1510 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_151800421 chr3:4976961-4995117 Sample_02_1518 Umbilical vein HUVEC_Scr 421 6 492 20 4 269 671 BHLHE40-AS1,BHLHE40
SE_02_085400311 chr3:4976961-4995549 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 311 4 504 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_115700097 chr3:4976962-5026999 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 97 29 1508 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_113801079 chr3:4976963-4996477 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1079 8 537 22 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_118200452 chr3:4976965-4995513 Sample_02_1182 Brain GBM11 452 6 503 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_053400471 chr3:4976968-5001299 Sample_02_0534 Blood vessel Circle of Willis_60y 471 11 700 25 4 293 671 BHLHE40-AS1,BHLHE40
SE_00_005300048 chr3:4976968-5027763 Sample_00_0053 Embryo trophoblast cell originated from H1 48 24 1550 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_048600090 chr3:4976970-4979237 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 90 1 66 2 2 102 1 BHLHE40-AS1,BHLHE40
SE_02_079500142 chr3:4976970-4995553 Sample_02_0795 Brain 1953 142 5 503 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_145200339 chr3:4976976-4995745 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 339 4 509 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_044600254 chr3:4976977-5071283 Sample_02_0446 Bone osteosarcoma tumor P2 254 38 3098 62 6 481 671 BHLHE40-AS1,BHLHE40
SE_02_056900555 chr3:4976985-5027964 Sample_02_0569 Periodontal ligament mesenchymal stem cell 555 17 1558 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_155800433 chr3:4976986-4987525 Sample_02_1558 Gastrointestinal Stromal GIST-7_PDGFRA e18 433 2 280 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_072600242 chr3:4976987-4995696 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 242 9 508 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_113700594 chr3:4976987-4997055 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 594 5 558 23 4 282 671 BHLHE40-AS1,BHLHE40
SE_02_108000664 chr3:4976988-4987569 Sample_02_1080 Muscle JR1 shCtrl 664 4 281 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_00_004900372 chr3:4976989-4987433 Sample_00_0049 Small intestine small intestine 30y 372 6 279 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_119300405 chr3:4976989-4995907 Sample_02_1193 Brain GBM27 405 5 517 21 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_055800106 chr3:4976989-4997224 Sample_02_0558 iPSCs FX52 iPSCs mock 106 7 567 24 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_096700474 chr3:4976990-4995569 Sample_02_0967 Brain H3.3K27M_JN57 474 9 503 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_065700023 chr3:4976990-4996181 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 23 11 529 22 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_074600530 chr3:4976993-4987587 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 530 2 281 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_04_000300051 chr3:4976993-4996237 Sample_04_0003 Lung A549 TEAD4 shRNA TGFb 51 5 532 22 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_142300063 chr3:4976994-4997189 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 63 7 565 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_118900645 chr3:4976997-4995566 Sample_02_1189 Brain GBM22 645 8 503 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_057100593 chr3:4976999-4995893 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 593 9 517 21 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_108500698 chr3:4976999-4996292 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 698 6 534 22 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_047900542 chr3:4976999-5027624 Sample_02_0479 Head and neck SCC25 542 27 1545 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_072700200 chr3:4977000-4997156 Sample_02_0727 Fetal lung IMR90_Etoposide 200 5 561 23 4 283 671 BHLHE40-AS1,BHLHE40
SE_02_151500246 chr3:4977000-5026177 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 246 18 1480 43 5 372 671 BHLHE40-AS1,BHLHE40
SE_00_005000017 chr3:4977002-4987250 Sample_00_0050 Esophagus esophagus_30y 17 5 275 9 3 247 671 BHLHE40-AS1,BHLHE40
SE_02_065100025 chr3:4977004-5027011 Sample_02_0651 Tracheobronchial epithelial HTBE_H3N2_18h 25 19 1507 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_114800520 chr3:4977007-4995659 Sample_02_1148 Kidney WT 9-12_control_vehicle 520 4 506 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_102700288 chr3:4977007-5027616 Sample_02_1027 Esophagus KYSE180_1 288 15 1544 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_050500275 chr3:4977008-5027641 Sample_02_0505 Esophagus KYSE70_1 275 20 1545 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_051600277 chr3:4977008-5027641 Sample_02_0516 Esophagus KYSE70 277 19 1545 45 5 398 671 BHLHE40-AS1,BHLHE40
SE_02_085800729 chr3:4977009-4995879 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 729 4 516 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_075200211 chr3:4977019-5026990 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 211 11 1506 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_065000022 chr3:4977024-5027314 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 22 14 1531 45 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_118100556 chr3:4977027-4995922 Sample_02_1181 Brain GBM10 556 5 516 21 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_060200286 chr3:4977032-5027006 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 286 18 1505 44 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_132000124 chr3:4977035-4996876 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 124 6 551 23 4 276 671 BHLHE40-AS1,BHLHE40
SE_02_132200246 chr3:4977036-4996571 Sample_02_1322 Connective Tissue HT1080_WT 246 4 535 23 4 276 671 BHLHE40-AS1,BHLHE40
SE_04_000400095 chr3:4977039-4997094 Sample_04_0004 Lung A549 TEAD2 shRNA TGFb 95 6 556 23 4 282 671 BHLHE40-AS1,BHLHE40
SE_02_066800105 chr3:4977043-4989889 Sample_02_0668 Prostate prostate cancer FA 105 9 364 15 3 250 671 BHLHE40-AS1,BHLHE40
SE_02_132100275 chr3:4977045-4996931 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 275 8 551 23 4 280 671 BHLHE40-AS1,BHLHE40
SE_01_010800045 chr3:4977047-4995613 Sample_01_0108 Adrenal gland adrenal gland_37y 45 11 502 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_01_010000038 chr3:4977048-4987481 Sample_01_0100 Thyroid gland thyroid gland_37y 38 4 278 9 3 248 671 BHLHE40-AS1,BHLHE40
SE_02_145400252 chr3:4977056-4995683 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 252 7 506 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_066900246 chr3:4977062-4995714 Sample_02_0669 Prostate prostate cancer_DSG 246 8 506 20 4 275 671 BHLHE40-AS1,BHLHE40
SE_02_059600173 chr3:4977066-5027398 Sample_02_0596 Mammary gland MCF10A_ DMSO 173 10 1530 45 5 397 671 BHLHE40-AS1,BHLHE40
SE_02_070600455 chr3:4977079-4987724 Sample_02_0706 Pancreas SUIT2 WT 455 11 282 10 3 246 671 BHLHE40-AS1,BHLHE40
SE_02_156500502 chr3:4977083-4987382 Sample_02_1565 Gastrointestinal Stromal Gastrointestinal stromal tumor 502 5 276 9 3 246 671 BHLHE40-AS1,BHLHE40
SE_02_079300123 chr3:4977086-4995394 Sample_02_0793 Brain MES20 123 7 498 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_136400271 chr3:4977087-4995881 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 271 4 514 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_072500249 chr3:4977088-5004713 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 249 10 797 28 4 299 671 BHLHE40-AS1,BHLHE40
SE_02_088600080 chr3:4977091-5027649 Sample_02_0886 Skin foreskin_ p63KLF4 80 15 1544 45 5 396 671 BHLHE40-AS1,BHLHE40
SE_04_000700220 chr3:4977095-4995597 Sample_04_0007 Lung A549 FOXA2 shRNA2 220 6 500 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_051100678 chr3:4977096-4980398 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 678 1 91 2 2 123 241 BHLHE40-AS1,BHLHE40
SE_02_074100555 chr3:4977100-4996346 Sample_02_0741 Muscle RH30 555 8 532 22 4 274 671 BHLHE40-AS1,BHLHE40
SE_02_121000244 chr3:4977104-4995787 Sample_02_1210 Brain GBM17 244 6 506 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_113400255 chr3:4977110-4996147 Sample_02_1134 Bone U2OS-interphase 255 5 523 22 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_060300115 chr3:4977111-5027036 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 115 20 1506 44 5 393 671 BHLHE40-AS1,BHLHE40
SE_02_107300062 chr3:4977111-5027485 Sample_02_1073 Keratinocyte keratinocytes stem cell 62 8 1535 45 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_078500110 chr3:4977113-4995655 Sample_02_0785 Brain 2097 110 3 503 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_070400101 chr3:4977124-4995637 Sample_02_0704 Pancreas HPAFII WT 101 12 500 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_082300329 chr3:4977131-5026982 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 329 9 1502 44 5 393 671 BHLHE40-AS1,BHLHE40
SE_02_145100192 chr3:4977139-4995706 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 192 4 503 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_135900619 chr3:4977142-4996237 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 619 9 527 22 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_087200152 chr3:4977142-5027820 Sample_02_0872 Colon HCT116_siCtrl-5FU 152 13 1545 45 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_135500922 chr3:4977148-4995694 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 922 4 503 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_050700163 chr3:4977149-5026409 Sample_02_0507 Esophagus TE7_1 163 15 1482 43 5 370 671 BHLHE40-AS1,BHLHE40
SE_02_050001249 chr3:4977155-4997164 Sample_02_0500 Fetal lung IMR90_#2 1249 10 557 23 4 281 671 BHLHE40-AS1,BHLHE40
SE_02_141800274 chr3:4977162-4996445 Sample_02_1418 Brain SF9427 274 4 529 22 4 274 671 BHLHE40-AS1,BHLHE40
SE_02_096800411 chr3:4977168-4995810 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 411 4 505 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_049800524 chr3:4977170-4997186 Sample_02_0498 Fetal lung IMR90 Senescent_1 524 8 559 23 4 281 671 BHLHE40-AS1,BHLHE40
SE_02_139900052 chr3:4977179-5027858 Sample_02_1399 Bone U2OS_siMLL3.1 52 21 1548 45 5 396 671 BHLHE40-AS1,BHLHE40
SE_02_112000245 chr3:4977187-4995578 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 245 8 496 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_127100861 chr3:4977187-4996357 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 861 7 528 22 4 274 671 BHLHE40-AS1,BHLHE40
SE_02_085900278 chr3:4977188-4996469 Sample_02_0859 Prostate PC3 278 2 529 22 4 274 671 BHLHE40-AS1,BHLHE40
SE_02_132500151 chr3:4977189-4987420 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 151 5 272 9 3 246 671 BHLHE40-AS1,BHLHE40
SE_02_154000407 chr3:4977192-5027478 Sample_02_1540 Nasopharyngeal HK1 407 20 1531 45 5 395 671 BHLHE40-AS1,BHLHE40
SE_02_055500717 chr3:4977215-5000157 Sample_02_0555 Other HAP1_WT 717 3 662 25 4 288 671 BHLHE40-AS1,BHLHE40
SE_01_011700238 chr3:4977219-4995648 Sample_01_0117 Lung fibroblast of lung 238 7 497 20 4 273 671 BHLHE40-AS1,BHLHE40,EDEM1
SE_02_057000529 chr3:4977229-4995880 Sample_02_0570 Brain LN229_10_mM_glucose 529 7 508 20 4 273 671 BHLHE40-AS1,BHLHE40
SE_02_156100044 chr3:4977232-4987226 Sample_02_1561 Gastrointestinal Stromal GIST-10_PDGFRA e1 44 5 267 9 3 243 671 BHLHE40-AS1,BHLHE40
SE_02_150900017 chr3:4977250-5027047 Sample_02_1509 Lung H3122_LR 17 23 1501 44 5 391 671 BHLHE40-AS1,BHLHE40
SE_02_051500072 chr3:4977254-5027100 Sample_02_0515 Esophagus KYSE140 72 15 1502 44 5 392 671 BHLHE40-AS1,BHLHE40
SE_02_050300072 chr3:4977254-5027102 Sample_02_0503 Esophagus KYSE140_1 72 15 1502 44 5 393 671 BHLHE40-AS1,BHLHE40
SE_02_063800736 chr3:4977261-4995494 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 736 10 493 20 4 271 671 BHLHE40-AS1,BHLHE40
SE_02_059000248 chr3:4977272-4997093 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 248 7 549 23 4 278 671 BHLHE40-AS1,BHLHE40
SE_02_052200367 chr3:4977273-4989823 Sample_02_0522 Colon SW620 367 9 355 15 3 246 671 BHLHE40-AS1,BHLHE40
SE_02_151600871 chr3:4977273-4996046 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 871 10 513 22 4 271 671 BHLHE40-AS1,BHLHE40
SE_02_050400409 chr3:4977273-5027003 Sample_02_0504 Esophagus KYSE510_1 409 17 1498 44 5 391 671 BHLHE40-AS1,BHLHE40
SE_02_155700551 chr3:4977277-4987281 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 551 2 268 9 3 243 671 BHLHE40-AS1,BHLHE40
SE_02_066600159 chr3:4977289-4996087 Sample_02_0666 Prostate RWPE1 Lacz rep1 159 3 514 22 4 271 671 BHLHE40-AS1,BHLHE40
SE_02_127400323 chr3:4977293-4995381 Sample_02_1274 Prostate PC3_DMSO 323 9 491 20 4 271 671 BHLHE40-AS1,BHLHE40
SE_02_135700621 chr3:4977293-4996329 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 621 10 526 22 4 271 671 BHLHE40-AS1,BHLHE40
SE_02_059700125 chr3:4977295-5027021 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 125 17 1498 44 5 391 671 BHLHE40-AS1,BHLHE40
SE_02_046900081 chr3:4977301-4997115 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 81 15 551 23 4 274 671 BHLHE40-AS1,BHLHE40
SE_02_057200682 chr3:4977309-4996394 Sample_02_0572 Brain LN229_1_mM_glucose 682 8 526 22 4 264 671 BHLHE40-AS1,BHLHE40
SE_02_084900194 chr3:4977316-4995673 Sample_02_0849 iPSCs iPSC_CBP-30 194 4 498 20 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_076700308 chr3:4977320-5026348 Sample_02_0767 Ovary OVCA429 308 28 1477 43 5 360 671 BHLHE40-AS1,BHLHE40,EDEM1,ARL8B
SE_02_063700664 chr3:4977321-4995700 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 664 7 499 20 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_132700056 chr3:4977327-4986935 Sample_02_1327 Hindbrain Hindbrain derived neural stem cells_NS13_H3.3K27M_WT 56 5 254 9 3 213 671 BHLHE40-AS1,BHLHE40
SE_02_127500351 chr3:4977328-4996307 Sample_02_1275 Prostate PC3_Vorinostat 351 12 525 22 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_112200197 chr3:4977334-4987063 Sample_02_1122 Adipose visceral adipose_CS_H507 197 3 259 9 3 224 671 BHLHE40-AS1,BHLHE40
SE_01_011200021 chr3:4977334-5027104 Sample_01_0112 Embryonic kidney HEK293_encode 21 18 1501 44 5 385 671 BHLHE40-AS1,BHLHE40
SE_02_094600799 chr3:4977335-5027528 Sample_02_0946 Tongue HN12 799 13 1531 45 5 385 671 BHLHE40-AS1,BHLHE40
SE_01_010200148 chr3:4977345-4995625 Sample_01_0102 Artery tibial artery 148 10 495 20 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_112700097 chr3:4977352-4987306 Sample_02_1127 Adipose visceral adipose_CTL_H465 97 4 268 9 3 236 671 BHLHE40-AS1,BHLHE40
SE_02_141900422 chr3:4977356-4995506 Sample_02_1419 Brain hNSC 422 4 491 20 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_065300015 chr3:4977367-5027163 Sample_02_0653 Tracheobronchial epithelial HTBE_H5N1_03h 15 12 1499 44 5 385 671 BHLHE40-AS1,BHLHE40
SE_02_079900344 chr3:4977372-4987473 Sample_02_0799 Brain MESMN1 344 4 268 9 3 236 671 BHLHE40-AS1,BHLHE40
SE_02_079100046 chr3:4977373-4995066 Sample_02_0791 Brain 2455 46 5 479 20 4 256 671 BHLHE40-AS1,BHLHE40
SE_02_135800362 chr3:4977382-5027541 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 362 18 1528 45 5 385 671 BHLHE40-AS1,BHLHE40
SE_02_127700165 chr3:4977400-4995390 Sample_02_1277 Prostate PC3_COMBO 165 9 488 20 4 263 671 BHLHE40-AS1,BHLHE40
SE_02_104801397 chr3:4977405-4989581 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1397 6 343 15 3 238 671 BHLHE40-AS1,BHLHE40
Genomic distribution of SEs associated with BHLHE40-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of BHLHE40-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)