SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200070
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:4963103-5039249
Size: 76146
Super-enhancer rank 70
Number of SE elements: 13
ChIP density(Case|Control): 126265.2972|16820.6514
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BHLHE40-AS1 ;
ROSE Overlap BHLHE40-AS1 ; BHLHE40 ;
ROSE Proximal BHLHE40-AS1 ;
ROSE Closest BHLHE40-AS1 ;
Lasso BHLHE40 ; ARL8B ;
PreSTIGE ;
ABC BHLHE40 ; BHLHE40-AS1 ; ARL8B ; EGOT ; EDEM1 ; ITPR1 ; SETMAR ; TRNT1 ; IL5RA ; ITPR1-AS1 ;
BETA BHLHE40-AS1 ; BHLHE40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200070 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers