Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_061600118 chr1:1342909-1372683 29774 118 4 1047 143 1 99 1548 MXRA8,DVL1,AURKAIP1,ANKRD65,PUSL1,TAS1R3,MIR6727,ACAP3,LOC148413,CPTP,CCNL2,MRPL20,MIR6808,MIR6726,CPSF3L
SE_02_061600122 chr1:150560547-150580567 20020 122 5 524 53 4 85 831 ADAMTSL4,MCL1,ADAMTSL4-AS1,ENSA,FALEC,MIR4257
SE_02_061600145 chr1:155960235-155989966 29731 145 14 648 31 1 213 1727 ARHGEF2,RXFP4,RIT1,SCARNA4,SSR2,MIR6738,KIAA0907,SNORA80E
SE_02_061600067 chr1:156095810-156131007 35197 67 5 835 72 4 250 695 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_061600128 chr1:156456147-156509145 52998 128 15 1374 58 10 450 2339 MEF2D,C1ORF61,MIR9-1
SE_02_061600102 chr1:201444592-201513485 68893 102 26 2009 211 14 281 2145 CSRP1,PHLDA3,TNNI1,LAD1,RPS10P7
SE_02_061600104 chr1:201695686-201793163 97477 104 42 2621 151 3 508 1472 NAV1,MIR5191,IPO9-AS1,MIR1231,IPO9
SE_02_061600161 chr1:203504978-203570792 65814 161 22 2039 97 3 152 142 OPTC,PRELP,ATP2B4
SE_02_061600210 chr1:221793138-221889642 96504 210 41 2604 93 16 268 0 LOC101929771
SE_02_061600062 chr1:221950078-222098140 148062 62 50 4033 231 40 221 0 LOC101929771
SE_02_061600088 chr1:234584635-234624885 40250 88 12 1116 62 4 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_061600034 chr1:32693987-32744312 50325 34 15 1315 96 2 159 653 KIAA1522,SYNC,RBBP4,ZBTB8OS
SE_02_061600140 chr1:42922810-42975798 52988 140 17 1519 184 6 235 1385 SLC2A1-AS1,SLC2A1
SE_02_061600208 chr1:58583318-58593788 10470 208 5 289 52 1 0 0 TACSTD2,OMA1
SE_02_061600007 chr1:58773058-58784120 11062 7 3 328 17 0 163 541 JUN,LINC01135
SE_02_061600005 chr1:58814842-58825410 10568 5 5 263 15 0 20 0 LINC01135,JUN
SE_02_061600048 chr1:58846059-58861607 15548 48 5 440 7 2 67 0 LINC01135
SE_02_061600014 chr1:58881066-58905077 24011 14 13 657 31 2 128 308 LINC01135
SE_02_061600097 chr1:58928603-58933658 5055 97 3 156 22 0 10 0 LINC01358
SE_02_061600163 chr1:59061582-59063858 2276 163 2 66 3 0 0 0 LINC01358
SE_02_061600009 chr1:59139309-59157818 18509 9 7 539 36 4 56 102 HSD52
SE_02_061600006 chr1:59295564-59299853 4289 6 1 93 6 1 2 130 FGGY
SE_02_061600003 chr1:59352487-59456137 103650 3 27 3029 117 10 243 40 FGGY
SE_02_061600016 chr1:59475683-59507292 31609 16 15 826 21 0 95 0 FGGY
SE_02_061600063 chr1:61076612-61094954 18342 63 3 395 0 1 310 469 NFIA
SE_02_061600055 chr1:93566034-93759557 193523 55 82 5057 416 17 556 1966 BCAR3,LOC100129046
SE_02_061600194 chr10:102592238-102647111 54873 194 14 1250 130 24 498 2128 SUFU,TRIM8
SE_02_061600138 chr10:126135425-126273138 137713 138 52 4428 187 26 343 109 ADAM12
SE_02_061600155 chr10:21515898-21535870 19972 155 4 379 12 0 450 1094 MLLT10,SKIDA1,CASC10,MIR1915
SE_02_061600112 chr10:3803247-3854480 51233 112 10 1753 20 9 157 0 KLF6
SE_02_061600077 chr10:5545537-5629688 84151 77 28 2994 242 18 190 0 CALML3,CALML5,CALML3-AS1,ASB13
SE_02_061600184 chr10:71956280-71983098 26818 184 8 776 55 7 53 214 CHST3
SE_02_061600044 chr10:72259811-72337302 77491 44 23 2148 170 2 263 1282 DNAJB12,DDIT4,ASCC1,ANAPC16
SE_02_061600043 chr10:73886211-73967344 81133 43 21 2252 241 8 267 1285 C10ORF55,PLAU,VCL,CAMK2G
SE_02_061600209 chr10:77494291-77605709 111418 209 40 2988 186 11 287 455 KCNMA1
SE_02_061600041 chr10:79066617-79163515 96898 41 29 2845 80 29 503 796 ZMIZ1,ZMIZ1-AS1
SE_02_061600099 chr10:93425592-93482780 57188 99 19 1658 217 7 148 389 MYOF,CEP55
SE_02_061600087 chr11:118907397-118930361 22964 87 9 544 38 2 427 640 BCL9L,MIR4492,CXCR5,UPK2,FOXR1
SE_02_061600157 chr11:12197444-12226675 29231 157 1 991 55 6 151 1484 MICAL2,MIR6124
SE_02_061600200 chr11:33670469-33737138 66669 200 19 1821 174 14 126 2177 CD59,C11ORF91,KIAA1549L,FBXO3-AS1,FBXO3
SE_02_061600095 chr11:62537088-62548168 11080 95 1 249 15 1 122 185 AHNAK,EEF1G,TUT1,MIR6747
SE_02_061600057 chr11:65415844-65431198 15354 57 1 434 17 2 42 1140 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_061600183 chr11:65487825-65495616 7791 183 1 212 20 2 5 0 SCYL1,MIR612,MALAT1
SE_02_061600136 chr11:65890554-65919127 28573 136 7 732 90 3 272 1476 FOSL1,CCDC85B,C11ORF68,MUS81,SART1,TSGA10IP,CTSW,EFEMP2,DRAP1,FIBP,CFL1
SE_02_061600186 chr11:67351462-67380143 28681 186 4 697 51 1 343 1346 POLD4,CLCF1,LOC100130987,RAD9A,PPP1CA,TBC1D10C,SSH3,CARNS1,RPS6KB2
SE_02_061600142 chr11:9748229-9826631 78402 142 24 2091 173 8 244 2379 SBF2,SWAP70,SBF2-AS1,LOC440028,LOC101928008
SE_02_061600164 chr12:108798409-108857631 59222 164 19 1655 65 3 120 1075 SSH1,MIR619,DAO
SE_02_061600116 chr12:124904390-124941429 37039 116 7 1277 46 4 71 1108 MIR5188,UBC,SCARB1,DHX37
SE_02_061600050 chr12:2231645-2360662 129017 50 47 3927 193 32 296 246 CACNA1C-IT3,CACNA1C,CACNA1C-AS4
SE_02_061600127 chr12:4027140-4034127 6987 127 4 190 18 1 28 0 PARP11
SE_02_061600198 chr12:4269399-4276256 6857 198 3 157 5 0 100 268 CCND2,CCND2-AS1,TIGAR
SE_02_061600159 chr12:57735994-57739076 3082 159 1 54 1 0 180 451 AGAP2,TSPAN31,OS9,METTL1,MARCH9,METTL21B,TSFM,CYP27B1,MIR6759,AGAP2-AS1,CDK4
SE_02_061600001 chr12:57831178-57905480 74302 1 28 1760 146 9 120 596 CTDSP2,MIR26A2,AVIL,TSFM,LOC100506844,XRCC6BP1
SE_02_061600103 chr12:69006369-69008321 1952 103 1 54 6 0 11 0 CPM
SE_02_061600015 chr12:69468322-69475570 7248 15 3 185 14 0 44 150 FRS2
SE_02_061600100 chr12:71729651-71733353 3702 100 2 105 2 1 0 0 TMEM19,RAB21
SE_02_061600082 chr12:71746843-71756946 10103 82 2 251 17 0 51 207 RAB21
SE_02_061600022 chr12:76082812-76086672 3860 22 1 94 3 3 23 205 NAP1L1
SE_02_061600105 chr12:77939554-77948190 8636 105 2 240 14 4 36 66 NAV3
SE_02_061600042 chr12:88237499-88247801 10302 42 4 219 9 0 0 0 TMTC3
SE_02_061600061 chr12:94971895-95001563 29668 61 21 792 163 2 30 52 NDUFA12
SE_02_061600049 chr12:96193896-96221549 27653 49 10 765 16 2 133 186 ELK3
SE_02_061600025 chr12:96395668-96401898 6230 25 3 156 1 0 79 264 CDK17
SE_02_061600018 chr12:96422269-96454725 32456 18 8 975 9 4 49 82 CDK17,CFAP54
SE_02_061600152 chr14:22822437-22853670 31233 152 6 943 93 8 258 1865 MMP14,MRPL52,SLC7A7,REM2,LRP10
SE_02_061600074 chr14:35362404-35368427 6023 74 3 197 23 1 32 0 NFKBIA
SE_02_061600019 chr14:61460963-61625397 164434 19 68 4671 238 60 432 1594 LOC101927780,FLJ22447,PRKCH
SE_02_061600162 chr14:68780361-68825005 44644 162 10 1199 33 10 367 1034 ZFP36L1
SE_02_061600151 chr14:74565577-74622070 56493 151 19 1506 97 7 195 548 LTBP2
SE_02_061600071 chr15:59165417-59331568 166151 71 49 5698 325 19 367 1351 MYO1E,LDHAL6B,MIR2116
SE_02_061600073 chr15:60347430-60409068 61638 73 25 1712 117 7 228 995 ANXA2
SE_02_061600182 chr15:62737405-62794044 56639 182 20 1742 34 5 242 1574 TLN2,MIR190A
SE_02_061600144 chr15:72219219-72239521 20302 144 8 467 37 1 63 472 PKM,GRAMD2,PARP6
SE_02_061600132 chr15:73920764-73932317 11553 132 1 289 32 6 176 694 LOXL1,LOXL1-AS1,TBC1D21
SE_02_061600204 chr15:73981430-73993095 11665 204 1 274 23 0 73 1067 STOML1,PML
SE_02_061600141 chr15:89040609-89129706 89097 141 38 2735 193 7 180 528 ABHD2
SE_02_061600180 chr15:89808619-89849719 41100 180 13 1208 111 14 52 1020 C15ORF38-AP3S2,ANPEP,AP3S2,MIR5009,MESP2,MIR5094
SE_02_061600139 chr15:92797418-92833849 36431 139 12 1126 34 0 47 0 LINC01578,ASB9P1
SE_02_061600211 chr15:96330621-96341750 11129 211 1 222 0 0 363 1143 NR2F2,MIR1469,NR2F2-AS1
SE_02_061600189 chr16:2032244-2043443 11199 189 1 450 21 2 61 1110 NTHL1,SLC9A3R2,GFER,SYNGR3,TSC2,MIR1225,ZNF598,NPW
SE_02_061600193 chr16:30982338-31026540 44202 193 14 1033 88 12 251 2859 SETD1A,HSD3B7,STX1B,ZNF668,STX4,ZNF646,ORAI3
SE_02_061600178 chr16:8842244-8888863 46619 178 21 2108 184 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_061600021 chr17:13476322-13602738 126416 21 54 3861 99 6 416 677 HS3ST3A1,MIR548H3
SE_02_061600181 chr17:17662992-17715294 52302 181 17 1380 84 2 185 210 SMCR2,RAI1
SE_02_061600108 chr17:17833698-17842934 9236 108 1 208 23 1 27 174 SREBF1,MIR6777,MIR33B
SE_02_061600201 chr17:18181036-18192303 11267 201 3 265 26 1 112 403 ALKBH5,LLGL1
SE_02_061600134 chr17:2382363-2413116 30753 134 6 1010 63 1 351 1716 LOC284009,MNT,TSR1,SGSM2
SE_02_061600133 chr17:43266059-43301453 35394 133 10 0 0 0 0 0 RNU2-1,LINC00854
SE_02_061600176 chr17:45220816-45235383 14567 176 3 388 31 1 144 1058 FMNL1,MAP3K14-AS1,SPATA32
SE_02_061600053 chr17:50026873-50070295 43422 53 13 1228 87 8 218 1209 ITGA3,LOC284080,PDK2,DLX3
SE_02_061600126 chr17:57860048-57956061 96013 126 37 2593 146 10 418 1905 CUEDC1,MRPS23,VEZF1
SE_02_061600187 chr17:7833651-7845717 12066 187 2 309 15 1 322 378 DNAH2,KDM6B,CYB5D1,CHD3,TMEM88,NAA38
SE_02_061600069 chr17:83190566-83205509 14943 69 2 125 31 0 0 0 RPL23AP87,METRNL
SE_02_061600191 chr18:3446306-3462410 16104 191 6 423 14 1 192 979 TGIF1,GAPLINC
SE_02_061600177 chr19:1249820-1256293 6473 177 1 274 5 1 102 931 MIDN,C19ORF24,CIRBP,CIRBP-AS1,ATP5D,STK11,CBARP,EFNA2
SE_02_061600125 chr19:13835535-13845078 9543 125 1 306 24 1 125 302 LOC284454,MIR27A,MIR24-2,MIR23A,NANOS3,ZSWIM4,MIR181D,MIR181C
SE_02_061600196 chr19:16062994-16085871 22877 196 7 750 54 3 33 566 TPM4,LINC00905,LINC00661,HSH2D,RAB8A
SE_02_061600085 chr19:2451352-2504759 53407 85 14 1799 121 2 141 723 LMNB2,GADD45B,TIMM13,MIR7108
SE_02_061600081 chr19:38637275-38713087 75812 81 26 2195 261 7 319 806 ACTN4,EIF3K,CAPN12,MAP4K1
SE_02_061600123 chr19:42269196-42287101 17905 123 5 354 24 1 462 382 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_061600072 chr19:43742877-43785501 42624 72 13 1250 124 6 190 1674 SMG9,KCNN4,LYPD5,ZNF283,IRGC
SE_02_061600173 chr19:47225493-47233390 7897 173 1 149 5 1 0 722 MIR3190,BBC3,MIR3191,INAFM1,CCDC9
SE_02_061600107 chr2:126654875-126665085 10210 107 5 316 16 5 19 193 GYPC
SE_02_061600170 chr2:127208167-127225371 17204 170 5 438 35 5 0 166 CYP27C1
SE_02_061600023 chr2:127386296-127416363 30067 23 8 736 68 8 50 0 MAP3K2,MIR4783,PROC
SE_02_061600013 chr2:127622535-127698498 75963 13 16 2626 237 5 232 5416 LIMS2,GPR17,MYO7B,SFT2D3
SE_02_061600059 chr2:191566475-191696037 129562 59 47 3485 212 12 349 735 NABP1,LOC105747689
SE_02_061600078 chr2:205680355-205715045 34690 78 13 897 36 2 399 314 NRP2
SE_02_061600066 chr2:215651682-215799269 147587 66 71 3873 132 8 458 303 LINC00607,LCAL4
SE_02_061600174 chr2:217058538-217109032 50494 174 13 1549 12 8 42 0 LOC101928327,TNP1
SE_02_061600154 chr2:218281237-218288487 7250 154 1 201 29 1 23 414 PNKD,TMBIM1,AAMP,GPBAR1,MIR6513
SE_02_061600148 chr2:218384151-218407534 23383 148 4 774 43 2 174 3184 SLC11A1,CTDSP1,MIR26B,CATIP-AS2,MIR6810,CATIP,VIL1,CATIP-AS1
SE_02_061600206 chr2:219174482-219179324 4842 206 2 149 15 1 67 788 FAM134A,CNPPD1,NHEJ1,ZFAND2B,ABCB6,SLC23A3
SE_02_061600033 chr2:219426309-219477212 50903 33 20 1274 57 3 550 3949 SPEG,DES,GMPPA,LOC100996693,DNPEP,ASIC4
SE_02_061600086 chr2:223924392-223945801 21409 86 7 586 52 0 42 157 WDFY1,MRPL44
SE_02_061600092 chr2:226790861-226800641 9780 92 1 267 11 1 225 911 IRS1,RHBDD1
SE_02_061600089 chr2:28387368-28415508 28140 89 6 705 37 3 68 1412 FOSL2,FLJ31356
SE_02_061600052 chr2:46798049-46889681 91632 52 36 3284 268 6 144 1014 LINC01119,LINC01118,TTC7A,MCFD2
SE_02_061600131 chr2:64830726-64877438 46712 131 23 1308 39 4 59 466 LOC101927438
SE_02_061600197 chr2:84888635-84973360 84725 197 18 2149 143 2 96 587 TMSB10,KCMF1,TRABD2A
SE_02_061600203 chr2:85394196-85468738 74542 203 18 2070 284 2 150 3041 CAPG,SH2D6,RETSAT,ELMOD3
SE_02_061600195 chr2:9206805-9291826 85021 195 35 2353 201 11 183 213 ASAP2
SE_02_061600205 chr2:95309923-95359885 49962 205 15 1324 61 0 106 942 KCNIP3,PROM2,FAHD2A
SE_02_061600150 chr20:35297440-35342244 44804 150 15 1069 100 29 0 820 UQCC1,EIF6,FAM83C-AS1,MMP24-AS1,FAM83C
SE_02_061600117 chr20:49276039-49283608 7569 117 1 279 38 1 40 446 SNORD12B,ZFAS1,SNORD12,SNORD12C,ZNFX1
SE_02_061600094 chr20:49673331-49707046 33715 94 15 900 61 2 23 0 B4GALT5
SE_02_061600091 chr21:34877719-34892763 15044 91 4 383 1 1 131 413 RUNX1
SE_02_061600096 chr21:38237328-38356064 118736 96 65 3328 322 9 237 919 KCNJ15,LINC01423,DSCR10
SE_02_061600166 chr22:20503921-20570013 66092 166 27 1916 162 3 109 1044 MED15,KLHL22
SE_02_061600051 chr22:36322360-36472166 149806 51 59 4526 432 11 356 1325 TXN2,MYH9,MIR6819,FOXRED2
SE_02_061600045 chr22:46063143-46083483 20340 45 1 569 20 2 150 0 PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_061600028 chr3:113736783-113749896 13113 28 5 319 12 1 67 375 ATP6V1A,NAA50,KIAA2018
SE_02_061600031 chr3:115217222-115255160 37938 31 13 810 16 2 185 0 ZBTB20
SE_02_061600207 chr3:115512169-115519365 7196 207 4 170 0 0 36 0 GAP43
SE_02_061600024 chr3:115648119-115668186 20067 24 8 483 13 2 58 71 GAP43
SE_02_061600004 chr3:115783353-115815374 32021 4 9 910 3 2 172 781 LSAMP,GAP43
SE_02_061600002 chr3:115968609-116070658 102049 2 35 2418 0 4 476 46 LSAMP,LSAMP-AS1
SE_02_061600035 chr3:116083290-116154681 71391 35 19 1950 19 5 262 87 LSAMP,LSAMP-AS1
SE_02_061600158 chr3:116439574-116446007 6433 158 1 152 5 0 76 270 LSAMP
SE_02_061600090 chr3:134308577-134375200 66623 90 24 1803 108 5 348 1724 AMOTL2,MIR6827
SE_02_061600036 chr3:143443004-143485815 42811 36 14 1200 81 10 176 43 SLC9A9,SLC9A9-AS1,CHST2
SE_02_061600120 chr3:143506086-143539489 33403 120 8 990 37 5 88 0 SLC9A9,SLC9A9-AS1,CHST2
SE_02_061600199 chr3:149555796-149606484 50688 199 15 1336 35 4 96 65 WWTR1
SE_02_061600124 chr3:149645583-149663038 17455 124 4 447 36 0 78 712 WWTR1-AS1,WWTR1
SE_02_061600146 chr3:150341940-150373635 31695 146 10 740 48 3 82 0 TSC22D2,LINC01214
SE_02_061600046 chr3:150403523-150451160 47637 46 11 1061 52 1 249 613 TSC22D2
SE_02_061600098 chr3:152266079-152271757 5678 98 1 119 4 0 45 528 MBNL1-AS1,MBNL1
SE_02_061600129 chr3:153159620-153174436 14816 129 4 391 9 0 67 752 RAP2B
SE_02_061600079 chr3:170686489-170770255 83766 79 31 2103 115 9 87 267 RPL22L1
SE_02_061600030 chr3:45007964-45219961 211997 30 82 6153 871 28 215 2031 CLEC3B,EXOSC7,CDCP1,TMEM158,ZDHHC3
SE_02_061600083 chr3:4976947-5027640 50693 83 19 1546 45 5 399 671 BHLHE40-AS1,BHLHE40
SE_02_061600070 chr3:71495123-71586665 91542 70 20 2421 37 14 733 777 FOXP1,MIR1284
SE_02_061600188 chr4:10074915-10121948 47033 188 16 2185 226 54 102 2453 MIR3138,WDR1,SLC2A9
SE_02_061600047 chr4:158769075-158874619 105544 47 43 2397 113 3 250 971 FNIP2,PPID
SE_02_061600202 chr4:176767458-176845514 78056 202 18 1941 156 0 199 261 VEGFC
SE_02_061600113 chr5:135992812-136067309 74497 113 37 2146 119 35 279 1556 TGFBI,VTRNA2-1,LECT2
SE_02_061600029 chr5:139635413-139766337 130924 29 47 3064 179 11 1403 572 LOC101929696,CXXC5,PSD2
SE_02_061600020 chr5:14140617-14281976 141359 20 62 3851 149 11 311 306 TRIO
SE_02_061600185 chr5:143175246-143264054 88808 185 37 2366 85 7 268 960 ARHGAP26-IT1,ARHGAP26
SE_02_061600160 chr5:149133723-149229136 95413 160 44 2519 183 7 368 765 ABLIM3,AFAP1L1
SE_02_061600054 chr5:149440240-149501576 61336 54 24 1656 70 5 123 556 CSNK1A1,MIR143HG,MIR143,MIR145
SE_02_061600012 chr5:150482749-150528184 45435 12 1 1296 79 1 211 579 NDST1,LOC102546298,RPS14
SE_02_061600156 chr5:150762686-150801730 39044 156 10 965 117 6 81 507 SMIM3,DCTN4,IRGM
SE_02_061600175 chr5:168784294-168825795 41501 175 12 1303 13 7 246 435 SLIT3,MIR218-2
SE_02_061600032 chr5:172757387-172882933 125546 32 34 3801 194 17 365 1752 LOC101928093,ERGIC1,DUSP1
SE_02_061600121 chr5:173908099-173927191 19092 121 7 423 35 4 52 26 CPEB4
SE_02_061600056 chr5:177128719-177135921 7202 56 2 140 8 0 149 404 NSD1,FGFR4
SE_02_061600135 chr6:113812343-113861979 49636 135 11 1153 44 3 284 556 MARCKS,FLJ34503,LINC01268
SE_02_061600027 chr6:157981326-158072570 91244 27 23 2836 188 7 108 2330 SYNJ2-IT1,SYNJ2
SE_02_061600190 chr6:16681042-16770985 89943 190 29 2301 102 19 376 427 ATXN1
SE_02_061600039 chr6:169146519-169225097 78578 39 19 2677 309 15 103 760 LOC101929504,THBS2
SE_02_061600008 chr6:41070952-41076889 5937 8 1 165 12 0 61 529 OARD1,NFYA,APOBEC2,LOC101929555,TSPO2,ADCY10P1,UNC5CL
SE_02_061600137 chr6:41557940-41584304 26364 137 8 715 56 1 168 224 FOXP4,MIR4641,FOXP4-AS1
SE_02_061600011 chr6:42781132-42785006 3874 11 1 82 6 0 18 93 TBCC,GLTSCR1L
SE_02_061600060 chr6:43996605-44081109 84504 60 27 2407 175 12 448 1407 C6ORF223,LOC101929705,MRPL14,TMEM63B
SE_02_061600143 chr6:45415333-45447330 31997 143 9 851 62 1 289 386 RUNX2,SUPT3H
SE_02_061600115 chr6:45642877-45719064 76187 115 26 2217 108 4 177 0 CLIC5,RUNX2
SE_02_061600101 chr6:83866632-83880033 13401 101 2 304 18 0 0 0 CYB5R4,RIPPLY2
SE_02_061600040 chr6:84616717-84660405 43688 40 13 1372 139 11 149 0 LOC102724201
SE_02_061600038 chr6:84758614-84778705 20091 38 5 513 41 0 133 406 TBX18
SE_02_061600109 chr7:101093609-101144089 50480 109 17 1533 179 9 96 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56
SE_02_061600192 chr7:130881568-130922926 41358 192 11 1263 76 10 129 301 LOC100506860,LINC-PINT,MIR29A,MIR29B1
SE_02_061600111 chr7:139672886-139778921 106035 111 37 2582 118 15 459 581 TBXAS1,HIPK2
SE_02_061600165 chr7:2618747-2645731 26984 165 10 956 79 0 68 229 TTYH3,AMZ1
SE_02_061600065 chr7:27160428-27174833 14405 65 1 420 19 0 390 1233 MIR196B,HOXA10,HOXA10-HOXA9,HOXA10-AS,HOXA9,HOXA11,HOXA-AS3,HOTTIP,HOXA-AS2,HOXA7,HOXA3,HOXA5,HOXA4,HOXA13,HOXA6,HOXA11-AS
SE_02_061600093 chr7:5418809-5430082 11273 93 2 337 3 0 246 846 TNRC18
SE_02_061600110 chr7:76282523-76394175 111652 110 27 3358 358 10 320 3080 SRRM3,YWHAG,HSPB1,SSC4D,ZP3
SE_02_061600076 chr8:100947684-100954627 6943 76 3 203 11 0 70 706 YWHAZ
SE_02_061600147 chr8:102787513-102811470 23957 147 5 598 51 1 94 670 AZIN1
SE_02_061600037 chr8:117826047-118036917 210870 37 87 5594 230 25 832 156 EXT1
SE_02_061600080 chr8:125378726-125452970 74244 80 19 2156 20 17 343 898 TRIB1
SE_02_061600064 chr8:127734230-127761143 26913 64 6 807 7 3 123 655 MYC,MIR1204,CASC11
SE_02_061600017 chr8:128073968-128202115 128147 17 42 3863 82 22 338 346 PVT1,MIR1208,MIR1207
SE_02_061600153 chr8:131803182-131859703 56521 153 29 1588 30 2 93 0 EFR3A
SE_02_061600172 chr8:133130074-133166640 36566 172 13 1124 80 4 41 249 TG,WISP1,SLA
SE_02_061600130 chr8:133281113-133304101 22988 130 10 659 14 0 55 301 NDRG1
SE_02_061600114 chr8:140987143-141044065 56922 114 21 1783 57 1 84 162 PTK2
SE_02_061600010 chr8:143902719-143974036 71317 10 13 2738 238 27 690 6065 PLEC,MIR661,EPPK1,PARP10,GRINA,SPATC1
SE_02_061600084 chr8:144422190-144431122 8932 84 1 343 32 0 22 1204 TONSL,VPS28,KIFC2,CYHR1,CPSF1,MIR6893,TONSL-AS1,SLC39A4,MIR939,MIR6849,ADCK5,MIR1234,FOXH1
SE_02_061600179 chr8:23292672-23357095 64423 179 28 2383 313 5 180 2156 LOXL2,R3HCC1,LOC100507156,CHMP7
SE_02_061600106 chr8:66505974-66567932 61958 106 23 1658 62 2 227 683 C8ORF46,MYBL1
SE_02_061600149 chr8:93821419-93885657 64238 149 23 1869 81 3 85 0 PDP1,MIR378D2
SE_02_061600119 chr8:93898239-93961734 63495 119 20 1768 125 4 259 733 PDP1,MIR378D2
SE_02_061600026 chr9:111895345-112076847 181502 26 69 5250 434 20 331 943 UGCG,MIR4668,SUSD1
SE_02_061600168 chr9:113572585-113635245 62660 168 23 1763 176 17 187 1889 RGS3
SE_02_061600169 chr9:124251607-124320884 69277 169 25 2109 141 5 302 902 NEK6,LOC100129034
SE_02_061600068 chr9:127495027-127586463 91436 68 32 2683 297 7 313 2772 FAM129B,LRSAM1,RPL12,STXBP1,SNORA65
SE_02_061600167 chr9:129124592-129148704 24112 167 7 833 89 4 79 1492 PPP2R4,IER5L,CRAT,DOLPP1
SE_02_061600058 chr9:129458554-129507581 49027 58 19 1455 87 0 143 874 LINC00963
SE_02_061600171 chr9:33100850-33170907 70057 171 37 1894 264 15 205 1028 B4GALT1-AS1,B4GALT1,SMU1
SE_02_061600075 chr9:37913902-38070381 156479 75 56 4719 371 23 491 1631 SHB,SLC25A51

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM3027233
Input ID: Name:GSM3027232
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb