SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000112561
Gene: TFEB Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:41683978-41736259 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104600147 chr6:41640492-41772178 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 147 62 3874 215 27 604 4458 FRS3,MDFI,TFEB,PGC,MIR4641,PRICKLE4,TOMM6
SE_02_088600467 chr6:41674463-41744603 Sample_02_0886 Skin foreskin_ p63KLF4 467 21 1976 116 13 382 3273 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_104700354 chr6:41675233-41744595 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 354 30 1961 116 13 382 3273 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_155500110 chr6:41675752-41725071 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 110 21 1393 92 11 228 1436 TFEB,MDFI,PGC
SE_02_095800578 chr6:41677342-41714123 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 578 11 1008 74 9 187 1290 TFEB,MDFI,PGC
SE_02_155300445 chr6:41679536-41731976 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 445 16 1462 94 11 231 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_104300097 chr6:41680254-41769939 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 97 52 2523 174 18 393 3429 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_121300016 chr6:41680303-41735640 Sample_02_1213 Brain GBM31 16 12 1521 100 11 320 2221 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_103500320 chr6:41681500-41743548 Sample_02_1035 Mammary gland HCC70_Vehicle 320 36 1752 105 11 347 3172 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_103601604 chr6:41681675-41727790 Sample_02_1036 Mammary gland HCC70_XY018 1604 26 1308 87 11 205 1436 TFEB,MDFI,PGC
SE_02_088900676 chr6:41681731-41731949 Sample_02_0889 Heart left ventricle_LV1183 676 16 1415 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_090000690 chr6:41681743-41729367 Sample_02_0900 Heart left ventricle_LV1452 690 18 1342 87 11 214 1436 TFEB,MDFI,PGC
SE_02_089800474 chr6:41681839-41731991 Sample_02_0898 Heart left ventricle_LV1356 474 20 1412 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_089200460 chr6:41681871-41731028 Sample_02_0892 Heart left ventricle_LV1215 460 15 1380 88 11 222 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_096700145 chr6:41681895-41732333 Sample_02_0967 Brain H3.3K27M_JN57 145 24 1418 90 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_089900899 chr6:41681915-41724667 Sample_02_0899 Heart left ventricle_LV1400 899 12 1203 80 9 198 1436 TFEB,MDFI,PGC
SE_02_090800690 chr6:41681920-41731827 Sample_02_0908 Heart left ventricle_DCM_LV1262 690 23 1405 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_120300026 chr6:41681937-41735524 Sample_02_1203 Brain NB1 26 10 1484 97 11 311 2184 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_098900688 chr6:41681943-41741729 Sample_02_0989 Kidney kidney cortex_WT 688 26 1659 103 11 343 2909 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_097100220 chr6:41681989-41736826 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 220 13 1510 97 11 331 2391 TFEB,PGC,MDFI,PRICKLE4,FRS3
SE_02_090100568 chr6:41681990-41731675 Sample_02_0901 Heart left ventricle_LV1471 568 33 1400 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_095600283 chr6:41681994-41731025 Sample_02_0956 Brain IDH1_2658 283 18 1378 88 11 222 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_117600045 chr6:41681996-41736050 Sample_02_1176 Brain GBM04 45 26 1493 97 11 328 2256 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119600046 chr6:41682039-41732427 Sample_02_1196 Brain GBM32 46 21 1418 90 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_120500053 chr6:41682041-41736020 Sample_02_1205 Brain NB3 53 19 1493 97 11 324 2252 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_120400031 chr6:41682048-41735529 Sample_02_1204 Brain NB2 31 13 1484 97 11 311 2187 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_00_004600215 chr6:41682053-41731880 Sample_00_0046 Heart right ventricle_34y 215 26 1406 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_117300009 chr6:41682071-41736234 Sample_02_1173 Brain GBM01 9 11 1500 97 11 328 2291 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119500120 chr6:41682229-41732354 Sample_02_1195 Brain GBM29 120 21 1411 89 11 223 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_091900526 chr6:41682279-41729534 Sample_02_0919 Heart left ventricle_DCM_LV1532 526 20 1332 85 11 214 1436 TFEB,MDFI,PGC
SE_01_009800513 chr6:41682362-41731142 Sample_01_0098 Heart left ventricle_51y 513 15 1372 86 11 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_096600034 chr6:41682383-41735831 Sample_02_0966 Brain H3.3K27M_JN29-BS3 34 27 1478 95 11 321 2242 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_090400526 chr6:41682446-41731243 Sample_02_0904 Heart left ventricle_DCM_LV1028 526 18 1370 85 11 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_089100524 chr6:41682464-41732465 Sample_02_0891 Heart left ventricle_LV1202 524 20 1406 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_156001034 chr6:41682465-41732418 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1034 14 1405 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_090300499 chr6:41682480-41732009 Sample_02_0903 Heart left ventricle_DCM_LV1009 499 17 1396 86 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_091100481 chr6:41682482-41729332 Sample_02_0911 Heart left ventricle_DCM_LV1290 481 18 1323 84 11 212 1436 TFEB,MDFI,PGC
SE_02_100400008 chr6:41682514-41711871 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 8 9 796 55 8 132 1290 TFEB,MDFI,PGC
SE_00_005100587 chr6:41682522-41725023 Sample_00_0051 Adrenal gland adrenal gland 30y 587 14 1199 79 9 197 1436 TFEB,MDFI,PGC
SE_02_121100017 chr6:41682538-41736103 Sample_02_1211 Brain GBM21 17 20 1481 94 11 326 2270 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_101300033 chr6:41682539-41732239 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 33 39 1400 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_100900017 chr6:41682550-41731890 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 17 40 1392 86 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_01_009700120 chr6:41682559-41735607 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 120 8 1473 94 11 313 2213 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_100000017 chr6:41682566-41732214 Sample_02_1000 Brain Lateral temporal lobe_15T_Young 17 33 1400 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119200195 chr6:41682569-41732192 Sample_02_1192 Brain GBM26 195 26 1400 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_076201235 chr6:41682570-41739781 Sample_02_0762 Podocyte podocyte_CTL 1235 16 1586 97 11 332 2579 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_118100321 chr6:41682574-41731946 Sample_02_1181 Brain GBM10 321 18 1393 86 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_100500007 chr6:41682585-41723823 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 7 25 1165 77 9 192 1410 TFEB,MDFI,PGC
SE_02_120200214 chr6:41682586-41732345 Sample_02_1202 Brain GBM38 214 20 1403 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_087400360 chr6:41682594-41714220 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 360 9 880 63 8 156 1290 TFEB,MDFI,PGC
SE_02_097700486 chr6:41682614-41729297 Sample_02_0977 Brain 2089_H3.3K27WT 486 17 1321 84 11 212 1436 TFEB,MDFI,PGC
SE_02_104900899 chr6:41682619-41732243 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 899 24 1400 87 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119100424 chr6:41682651-41731817 Sample_02_1191 Brain GBM25 424 16 1390 86 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119400170 chr6:41682681-41732232 Sample_02_1194 Brain GBM28 170 18 1396 86 11 221 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_078100087 chr6:41682723-41735811 Sample_02_0781 Lymphoma Pfeiffer_DMSO 87 9 1469 92 11 321 2242 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_082600309 chr6:41682785-41759639 Sample_02_0826 Stomach gastric tumor 309 28 2168 138 15 374 3429 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_077900154 chr6:41682970-41735790 Sample_02_0779 Lymphoma U2932 154 21 1462 92 11 320 2242 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_118600856 chr6:41682993-41730855 Sample_02_1186 Brain GBM15 856 9 1351 83 11 219 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_121200261 chr6:41683014-41732377 Sample_02_1212 Brain GBM30 261 25 1390 84 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_082700192 chr6:41683081-41729069 Sample_02_0827 Stomach normal gastric 192 10 1300 81 10 210 1436 TFEB,MDFI,PGC
SE_02_078000153 chr6:41683094-41735500 Sample_02_0780 Liver SMMC-7721 153 14 1456 91 10 308 2174 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_121000155 chr6:41683110-41728457 Sample_02_1210 Brain GBM17 155 19 1290 81 10 202 1436 TFEB,MDFI,PGC
SE_02_096900116 chr6:41683132-41731612 Sample_02_0969 Brain H3.3K27M_PL637 116 25 1370 83 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_119000180 chr6:41683152-41729271 Sample_02_1190 Brain GBM24 180 20 1308 81 10 211 1436 TFEB,MDFI,PGC
SE_02_119700299 chr6:41683188-41732323 Sample_02_1197 Brain GBM33 299 30 1390 84 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_117800311 chr6:41683189-41732198 Sample_02_1178 Brain GBM07 311 19 1387 84 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_114200118 chr6:41683192-41727250 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 118 10 1260 81 10 202 1436 TFEB,MDFI,PGC
SE_02_100800015 chr6:41683209-41732003 Sample_02_1008 Brain Lateral temporal lobe_1T_AD 15 35 1381 83 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_100700016 chr6:41683210-41714987 Sample_02_1007 Brain Lateral temporal lobe_14T_Old 16 19 898 62 7 156 1290 TFEB,MDFI,PGC
SE_02_114500218 chr6:41683215-41743553 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 218 35 1712 99 10 344 3172 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_119800048 chr6:41683280-41732306 Sample_02_1198 Brain GBM34 48 28 1388 84 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_101100004 chr6:41683284-41731319 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 4 22 1357 82 10 219 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_117500582 chr6:41683291-41725142 Sample_02_1175 Brain GBM03 582 10 1188 77 9 196 1436 TFEB,MDFI,PGC
SE_02_101400175 chr6:41683292-41694566 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 175 5 294 20 2 92 1129 TFEB,MDFI
SE_02_097900333 chr6:41683323-41732708 Sample_02_0979 Brain JN14-BS1_H3.3K27M 333 18 1393 84 10 220 1457 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_076300584 chr6:41683369-41739731 Sample_02_0763 Podocyte podocyte_DEX 584 11 1570 94 10 331 2569 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_100200006 chr6:41683412-41705363 Sample_02_1002 Brain Lateral temporal lobe_18T_Young 6 6 600 41 7 107 1129 TFEB,MDFI,PGC
SE_02_067200304 chr6:41683413-41742448 Sample_02_0672 Endometrium endometrium cancer_DSG 304 15 1662 97 10 341 3029 TFEB,PGC,MDFI,TOMM6,PRICKLE4,FRS3
SE_02_064701201 chr6:41683457-41732234 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1201 11 1383 84 10 220 1436 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_095300216 chr6:41683460-41735719 Sample_02_0953 Brain H3.3K27M_1840 216 12 1456 91 10 319 2240 TFEB,MDFI,PRICKLE4,PGC,FRS3
SE_02_045201041 chr6:41687249-41730889 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 1041 7 1258 72 10 181 826 TFEB,PRICKLE4,MDFI,PGC,FRS3
SE_02_100100005 chr6:41687889-41713644 Sample_02_1001 Brain Lateral temporal lobe_17T_Young 5 10 727 46 7 110 560 TFEB,MDFI,PGC
SE_02_110700742 chr6:41687894-41732307 Sample_02_1107 Brain SK-N-AS 742 18 1281 72 10 178 706 TFEB,PRICKLE4,MDFI,PGC,FRS3
SE_02_067400805 chr6:41687916-41724119 Sample_02_0674 Endometrium E1_FA 805 9 1050 62 8 149 702 TFEB,MDFI,PGC
SE_02_101000004 chr6:41688289-41713997 Sample_02_1010 Brain Lateral temporal lobe_3T_AD 4 10 723 46 7 106 488 TFEB,MDFI,PGC
SE_02_085701321 chr6:41688551-41714970 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1321 5 764 49 7 107 488 TFEB,PGC
SE_02_095500331 chr6:41688554-41716317 Sample_02_0955 Brain IDH1_2469 331 11 804 51 7 107 488 TFEB,PGC
SE_02_118900174 chr6:41688664-41714624 Sample_02_1189 Brain GBM22 174 11 744 47 7 106 488 TFEB,PGC
SE_02_100300011 chr6:41688751-41713581 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 11 11 697 44 7 103 488 TFEB,PGC
SE_02_097800401 chr6:41688800-41724889 Sample_02_0978 Brain 2168_IDH1 401 7 1042 60 8 147 634 TFEB,PGC
SE_02_141500634 chr6:41688802-41724631 Sample_02_1415 Brain DIPGIV 634 10 1033 60 8 143 634 TFEB,PGC
SE_02_100600012 chr6:41689082-41732294 Sample_02_1006 Brain Lateral temporal lobe_13T_Old 12 24 1243 70 10 170 634 TFEB,PRICKLE4,PGC,FRS3
SE_02_096100145 chr6:41693088-41724105 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 145 8 904 55 6 101 307 TFEB,PGC
SE_02_129100154 chr6:41693165-41734194 Sample_02_1291 Lung NCI-H889_p8-15 154 19 1169 66 8 160 647 TFEB,PRICKLE4,PGC,FRS3
SE_02_142900219 chr6:41693223-41734045 Sample_02_1429 Blood GM12878_WT 219 11 1163 66 8 160 633 TFEB,PRICKLE4,PGC,FRS3,TOMM6,MDFI,USP49
SE_02_122500026 chr6:41693402-41735582 Sample_02_1225 Bone marrow RAJI 26 12 1196 72 8 221 1074 TFEB,PRICKLE4,PGC,FRS3,TOMM6,CCND3
SE_02_079000017 chr6:41693499-41724071 Sample_02_0790 Brain DI28 17 6 899 55 6 99 307 TFEB,PGC
SE_02_115500181 chr6:41694256-41735678 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 181 9 1177 72 8 226 1104 TFEB,PRICKLE4,PGC,FRS3
SE_02_121800269 chr6:41694779-41732920 Sample_02_1218 Bone marrow Daudi 269 19 1099 64 8 129 370 TFEB,PRICKLE4,PGC,FRS3
SE_02_073100102 chr6:41697087-41735643 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 102 12 1086 66 3 220 1093 TFEB,PRICKLE4,PGC,FRS3
SE_02_130200291 chr6:41697466-41735681 Sample_02_1302 Lymphoma RL DMSO 291 9 1076 65 3 222 1104 TFEB,PRICKLE4,PGC,FRS3
SE_02_091300889 chr6:41697545-41732031 Sample_02_0913 Heart left ventricle_DCM_LV1304 889 20 993 57 3 124 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_092900544 chr6:41697644-41742978 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 544 21 1298 72 3 245 1942 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_090900902 chr6:41697681-41725053 Sample_02_0909 Heart left ventricle_DCM_LV1264 902 21 793 50 1 99 307 TFEB,PGC
SE_02_130400220 chr6:41697698-41735657 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 220 8 1064 65 3 221 1095 TFEB,PRICKLE4,PGC,FRS3
SE_02_090500808 chr6:41697711-41730972 Sample_02_0905 Heart left ventricle_DCM_LV1033 808 17 955 56 3 122 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_090200930 chr6:41697757-41731041 Sample_02_0902 Heart left ventricle_LV1558 930 20 954 55 3 122 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_091501131 chr6:41697817-41725104 Sample_02_0915 Heart left ventricle_DCM_LV1371 1131 13 789 49 2 99 307 TFEB,PGC
SE_02_089600846 chr6:41697860-41732075 Sample_02_0896 Heart left ventricle_LV1294 846 18 981 55 3 123 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_090701187 chr6:41697862-41729451 Sample_02_0907 Heart left ventricle_DCM_LV1223 1187 15 910 53 3 114 307 TFEB,PGC
SE_02_090600941 chr6:41697873-41727350 Sample_02_0906 Heart left ventricle_DCM_LV1072 941 14 859 53 3 105 307 TFEB,PGC
SE_02_091800846 chr6:41697951-41728523 Sample_02_0918 Heart left ventricle_DCM_LV1437 846 15 887 53 3 109 307 TFEB,PGC
SE_02_089300775 chr6:41698005-41729354 Sample_02_0893 Heart left ventricle_LV1226 775 13 905 53 3 114 307 TFEB,PGC
SE_02_132001394 chr6:41698011-41724333 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1394 4 761 46 1 95 307 TFEB,PGC
SE_02_073500070 chr6:41698021-41735647 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 70 11 1055 63 3 220 1093 TFEB,PRICKLE4,PGC,FRS3
SE_02_092000931 chr6:41698041-41725156 Sample_02_0920 Heart left ventricle_DCM_LV1535 931 16 785 49 2 99 307 TFEB,PGC
SE_02_088801085 chr6:41698056-41731004 Sample_02_0888 Heart left ventricle_LV1160 1085 18 945 54 3 122 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_132201414 chr6:41698058-41724450 Sample_02_1322 Connective Tissue HT1080_WT 1414 4 762 46 1 95 307 TFEB,PGC
SE_02_073300110 chr6:41698058-41735581 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 110 14 1052 63 3 214 1073 TFEB,PRICKLE4,PGC,FRS3
SE_02_126900680 chr6:41698062-41724160 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 680 5 755 46 1 94 307 TFEB,PGC
SE_02_092200641 chr6:41698092-41730665 Sample_02_0922 Heart fetal heart_PCW10_12434 641 16 936 54 3 118 307 TFEB,FRS3,PGC
SE_02_053000640 chr6:41698107-41742372 Sample_02_0530 Mammary gland MCF10A 640 17 1255 69 3 243 1887 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_089400616 chr6:41698114-41729461 Sample_02_0894 Heart left ventricle_LV1248 616 11 906 53 3 114 307 TFEB,PGC
SE_02_158600441 chr6:41698115-41708861 Sample_02_1586 Blood SupB15 ACY1035 441 8 312 19 0 31 161 TFEB,PGC
SE_02_089700812 chr6:41698126-41731290 Sample_02_0897 Heart left ventricle_LV1325 812 18 952 54 3 122 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_089000709 chr6:41698131-41729411 Sample_02_0890 Heart left ventricle_LV1200 709 14 904 53 3 114 307 TFEB,PGC
SE_00_005200719 chr6:41698146-41730958 Sample_00_0052 Heart left ventricle 3y 719 16 945 54 3 122 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_088700738 chr6:41698163-41729543 Sample_02_0887 Heart left ventricle_LV1121 738 9 907 53 3 114 307 TFEB,PGC
SE_00_005500728 chr6:41698208-41732365 Sample_00_0055 Spleen spleen 34y 728 15 981 55 3 123 307 TFEB,PRICKLE4,PGC,FRS3,TOMM6,BYSL,MED20
SE_02_092100314 chr6:41698218-41739423 Sample_02_0921 Heart embryonic heart_CS22 314 20 1156 65 3 234 1420 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_092400659 chr6:41698230-41727321 Sample_02_0924 Heart fetal heart_PCW10_12569 659 11 851 52 3 105 307 TFEB,PGC
SE_02_073200144 chr6:41698299-41734222 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 144 15 1019 56 3 154 658 TFEB,PRICKLE4,PGC,FRS3
SE_02_158500459 chr6:41698431-41708934 Sample_02_1585 Blood SupB15 DMSO 459 6 304 18 0 31 161 TFEB,PGC
SE_02_073400082 chr6:41698553-41735641 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 82 9 1043 62 3 215 1092 TFEB,PRICKLE4,PGC,FRS3
SE_02_078200106 chr6:41698624-41735698 Sample_02_0782 Blood MEC1 106 11 1040 61 3 218 1109 TFEB,PRICKLE4,PGC,FRS3
SE_02_092300615 chr6:41698639-41728029 Sample_02_0923 Heart fetal heart_PCW10_12522 615 11 855 51 3 101 307 TFEB,PGC
SE_02_092500520 chr6:41698681-41728021 Sample_02_0925 Heart fetal heart_PCW17_12570 520 8 855 51 3 101 307 TFEB,PGC
SE_02_124900427 chr6:41698870-41731424 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 427 22 936 52 3 118 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_125200478 chr6:41698876-41731092 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 478 15 929 52 3 118 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_072900077 chr6:41699077-41735599 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 77 14 1032 61 3 210 1081 TFEB,PRICKLE4,PGC,FRS3
SE_02_128300291 chr6:41699217-41734297 Sample_02_1283 Lung NCI-H2107_p8-15 291 9 1000 55 3 155 681 TFEB,PRICKLE4,PGC,FRS3
SE_02_125100477 chr6:41699256-41731747 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 477 17 945 53 3 119 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_073900451 chr6:41699537-41735942 Sample_02_0739 Blood Nalm6 451 8 1024 60 3 219 1113 TFEB,PRICKLE4,PGC,FRS3
SE_02_073000133 chr6:41699598-41734226 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 133 9 987 54 3 150 658 TFEB,PRICKLE4,PGC,FRS3
SE_02_072800122 chr6:41699632-41735605 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 122 10 1018 60 3 211 1083 TFEB,PRICKLE4,PGC,FRS3
SE_02_088500313 chr6:41699769-41735979 Sample_02_0885 Blood NALM6_2 313 9 1017 59 3 219 1115 TFEB,PRICKLE4,PGC,FRS3
SE_02_133100230 chr6:41700428-41740658 Sample_02_1331 Blood Molm13_CTRL 230 12 1121 61 3 239 1601 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_078300171 chr6:41700472-41735638 Sample_02_0783 Blood MEC2 171 7 982 57 3 215 1090 TFEB,PRICKLE4,PGC,FRS3
SE_02_104800634 chr6:41700633-41739943 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 634 13 1097 60 3 232 1483 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_110500635 chr6:41700797-41740626 Sample_02_1105 Brain NBL-S 635 15 1112 60 3 239 1593 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_062200397 chr6:41701099-41729626 Sample_02_0622 Blood EOL1_Naive 397 21 822 47 3 109 307 TFEB,PGC,FOXP4,TOMM6,CCND3,MDFI,PRICKLE4
SE_02_115400138 chr6:41702135-41735662 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 138 5 942 57 3 216 1095 TFEB,PRICKLE4,PGC,FRS3
SE_02_115200185 chr6:41702174-41735696 Sample_02_1152 Lymphoma RL_WT_gRNA1 185 4 942 57 3 217 1108 TFEB,PRICKLE4,PGC,FRS3
SE_02_130300314 chr6:41702484-41734253 Sample_02_1303 Lymphoma RL_tazemetostat 314 9 900 51 3 152 671 TFEB,PRICKLE4,PGC,FRS3
SE_02_115700101 chr6:41702628-41731976 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 101 21 851 49 3 118 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_084100563 chr6:41702713-41731875 Sample_02_0841 Blood THP-1_untr 563 9 850 49 3 118 307 TFEB,PRICKLE4,PGC,FRS3,FOXP4,TOMM6,CCND3,MDFI
SE_02_129600150 chr6:41702785-41750061 Sample_02_1296 Perigastric lymph node Perigastric lymph node 150 15 1362 76 3 262 2300 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_00_005700378 chr6:41702895-41730853 Sample_00_0057 Heart right ventricle 3y 378 24 814 47 3 117 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_115300195 chr6:41702943-41735721 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 195 4 923 56 3 217 1111 TFEB,PRICKLE4,PGC,FRS3
SE_02_131400123 chr6:41703017-41735646 Sample_02_1314 Brain hMGLs_TREM2-KO 123 12 921 55 3 215 1093 TFEB,PRICKLE4,PGC,FRS3
SE_02_106500098 chr6:41703337-41735481 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 98 8 909 54 3 204 1038 TFEB,PRICKLE4,PGC,FRS3
SE_02_122400386 chr6:41703811-41732474 Sample_02_1224 Bone marrow normal plasma cell 386 12 835 47 3 118 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_115600140 chr6:41703955-41732061 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 140 14 817 45 3 117 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_075100186 chr6:41703999-41735641 Sample_02_0751 Lymphoma Rec-1_WO 186 12 894 53 3 213 1092 TFEB,PRICKLE4,PGC,FRS3
SE_02_131600194 chr6:41704064-41732057 Sample_02_1316 Brain hMGLs_TREM2-R47H 194 15 817 45 3 117 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_075000194 chr6:41704175-41735646 Sample_02_0750 Lymphoma Rec-1_GSI 194 15 891 53 3 214 1093 TFEB,PRICKLE4,PGC,FRS3
SE_01_009400294 chr6:41704307-41735585 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 294 3 884 53 3 208 1074 TFEB,PRICKLE4,PGC,FRS3
SE_02_078400436 chr6:41704312-41735640 Sample_02_0784 Blood OSU-CLL 436 14 884 53 3 213 1092 TFEB,PRICKLE4,PGC,FRS3
SE_02_131700157 chr6:41704333-41732170 Sample_02_1317 Brain hMGLs_SORL1-KO 157 13 810 46 3 117 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_122300273 chr6:41704368-41735613 Sample_02_1223 Bone marrow KMS28BM 273 7 883 53 3 209 1085 TFEB,PRICKLE4,PGC,FRS3
SE_02_131800210 chr6:41704415-41732335 Sample_02_1318 Brain hMGLs_SORL1-A528T 210 11 812 46 3 114 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_131200154 chr6:41704417-41732607 Sample_02_1312 Brain hMGLs_WT 154 15 816 46 3 114 311 TFEB,PRICKLE4,PGC,FRS3
SE_02_129800118 chr6:41704439-41750068 Sample_02_1298 Hilar lymph node Hilar lymph node 118 14 1314 72 3 258 2300 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_00_005600290 chr6:41704447-41742530 Sample_00_0056 Sigmoid colon sigmoid colon 3y 290 16 1089 59 3 236 1916 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_131500239 chr6:41704461-41732174 Sample_02_1315 Brain hMGLs_INPP5D SNP 239 16 808 46 3 114 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_058600368 chr6:41704476-41735719 Sample_02_0586 Chordal patient-derived chordoma MGH_4 368 13 881 53 3 213 1111 TFEB,PRICKLE4,PGC,FRS3
SE_02_074700826 chr6:41704509-41732071 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 826 19 804 45 3 114 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_129900245 chr6:41704560-41749989 Sample_02_1299 Liver liver 245 17 1313 72 3 258 2300 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_109800457 chr6:41704604-41725268 Sample_02_1098 Blood THP1_DMSO_noPMA 457 6 611 39 2 90 307 TFEB,PGC
SE_02_117400628 chr6:41704643-41732185 Sample_02_1174 Brain GBM02 628 12 807 46 3 114 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_068700395 chr6:41704781-41735529 Sample_02_0687 Lung NCI-H146_no infection 395 6 872 53 3 201 1058 TFEB,PRICKLE4,PGC,FRS3
SE_02_139300489 chr6:41704824-41731088 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 489 8 768 44 3 112 307 TFEB,PRICKLE4,PGC,FRS3
SE_02_134500386 chr6:41704885-41732651 Sample_02_1345 Leukophereses leukophereses_p358 386 11 808 46 3 113 318 TFEB,PRICKLE4,PGC,FRS3
SE_02_131300125 chr6:41704898-41735718 Sample_02_1313 Brain hMGLs_CD33_SNP 125 14 874 53 3 212 1111 TFEB,PRICKLE4,PGC,FRS3
SE_02_116900469 chr6:41704952-41745159 Sample_02_1169 Biliary H69_TGF beta_16h_2 469 13 1171 61 3 243 2209 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_01_010500628 chr6:41705036-41728370 Sample_01_0105 Thyroid gland thyroid gland_54y 628 8 696 41 3 95 307 TFEB,PGC
SE_02_116800438 chr6:41705111-41749922 Sample_02_1168 Biliary H69_TGF Vehicle_2 438 10 1296 69 3 257 2300 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_116600459 chr6:41705235-41744479 Sample_02_1166 Biliary H69_TGF beta_16h_1 459 14 1140 60 3 239 2113 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_133500272 chr6:41705414-41724401 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 272 5 562 33 1 85 307 TFEB,PGC
SE_02_069500245 chr6:41705430-41729335 Sample_02_0695 Lung NCI-H889_no infection 245 12 704 40 3 104 307 TFEB,PGC
SE_02_139400421 chr6:41705514-41732683 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 421 4 788 43 3 113 309 TFEB,PRICKLE4,PGC,FRS3
SE_01_010000138 chr6:41705516-41713657 Sample_01_0100 Thyroid gland thyroid gland_37y 138 2 230 17 0 45 149 TFEB,PGC
SE_02_064801403 chr6:41705673-41732258 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1403 9 780 43 3 111 266 TFEB,PRICKLE4,PGC,FRS3
SE_02_072500306 chr6:41705698-41732216 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 306 12 779 43 3 111 255 TFEB,PRICKLE4,PGC,FRS3
SE_02_153901044 chr6:41705732-41724957 Sample_02_1539 Nasopharyngeal C666-1 1044 11 572 33 1 87 248 TFEB,PGC
SE_02_154100409 chr6:41705829-41741117 Sample_02_1541 Nasopharyngeal HNE1 409 13 1001 55 3 230 1639 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_00_005800265 chr6:41706120-41745361 Sample_00_0058 Stomach stomach 34y 265 9 1137 58 3 233 2049 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_101200116 chr6:41710348-41713965 Sample_02_1012 Brain Lateral temporal lobe_8T_AD 116 5 97 9 0 25 0 TFEB,PGC
SE_02_101400057 chr6:41711402-41731887 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 57 9 603 31 3 90 146 TFEB,PRICKLE4,PGC,FRS3
SE_02_143400814 chr6:41718010-41743826 Sample_02_1434 Trophoblast trophoblast stem cells 814 4 737 34 2 183 1889 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_047500306 chr6:41722883-41744801 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 306 8 625 27 2 161 2023 TFEB,PGC,TOMM6,PRICKLE4,FRS3
SE_02_100400231 chr6:41728029-41732057 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 231 5 107 2 0 18 0 TFEB,PRICKLE4,PGC,FRS3
SE_02_125500527 chr6:41739318-41743529 Sample_02_1255 Bladder Bladder tumor Luminal2 527 1 152 7 0 13 613 PGC,TFEB,TOMM6,PRICKLE4,FRS3
SE_02_123500456 chr6:41755614-41771199 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 456 8 453 43 4 64 260 FRS3,TFEB,TOMM6,PRICKLE4,PGC
SE_02_098800915 chr6:41758195-41769846 Sample_02_0988 Blood K562_EPZ 915 3 333 33 4 19 0 TFEB,TOMM6,PRICKLE4,PGC,FRS3
SE_00_005800368 chr6:41758946-41785683 Sample_00_0058 Stomach stomach 34y 368 8 800 68 9 190 1609 FRS3,PRICKLE4,TFEB,TOMM6,PGC
SE_02_048800506 chr6:41766625-41769292 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 506 3 82 5 2 4 0 TFEB,TOMM6,PRICKLE4,PGC,FRS3
SE_02_035400647 chr6:41782785-41788410 Sample_02_0354 Colon Colo205 647 1 195 17 3 47 873 PRICKLE4,TOMM6,PGC,TFEB,FRS3
SE_02_025500700 chr6:41783421-41792993 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 700 2 283 23 4 64 1218 PRICKLE4,TOMM6,PGC,TFEB,FRS3
SE_02_099500377 chr6:41784151-41792132 Sample_02_0995 Blood MOLM-13_empty vector 377 6 241 21 3 55 1018 TOMM6,USP49,PRICKLE4,TFEB,PGC,FRS3
SE_02_057400270 chr6:41784168-41792693 Sample_02_0574 Blood MOLM-13_sgNeg2 270 4 256 23 4 58 1079 TOMM6,USP49,PRICKLE4,TFEB,PGC,FRS3
SE_02_057700230 chr6:41784193-41792168 Sample_02_0577 Blood MOLM13_empty 230 2 243 21 3 55 1009 TOMM6,USP49,PRICKLE4,TFEB,PGC,FRS3
SE_02_099400422 chr6:41784235-41792266 Sample_02_0994 Blood MOLM13_SIK3TQ 422 3 244 21 3 55 1017 TOMM6,USP49,PRICKLE4,TFEB,PGC,FRS3
SE_02_099300443 chr6:41784288-41791031 Sample_02_0993 Blood MOLM-13_empty 443 4 213 19 3 54 892 TOMM6,USP49,PRICKLE4,TFEB,PGC,FRS3
SE_02_058200229 chr6:41784729-41792075 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 229 1 220 20 3 52 959 TOMM6,USP49,PRICKLE4,FRS3,TFEB,PGC
SE_02_058100282 chr6:41784730-41791147 Sample_02_0581 Blood MOLM13_empty_HG 282 1 199 19 3 52 881 TOMM6,USP49,PRICKLE4,FRS3,TFEB,PGC
SE_02_057500642 chr6:41784785-41790723 Sample_02_0575 Blood MOLM13_sgLKB1e2 642 1 190 18 2 52 843 TOMM6,USP49,PRICKLE4,FRS3,TFEB,PGC
SE_02_133200761 chr6:41785499-41793891 Sample_02_1332 Blood Monomac6_CTRL 761 2 237 22 3 63 891 TOMM6,USP49,PRICKLE4,FRS3,TFEB,PGC
SE_02_057800657 chr6:41785947-41790661 Sample_02_0578 Blood MOLM-13_sgSIK3e4 657 1 150 12 1 44 651 TOMM6,USP49,PRICKLE4,FRS3,TFEB,PGC
Genomic distribution of SEs associated with TFEB
Genome Browser

The strength of the tissue affected by the gene

Expression of TFEB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)