Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_069500194 chr1:111847771-111864172 16401 194 6 451 25 1 70 0 KCND3,KCND3-IT1,KCND3-AS1
SE_02_069500015 chr1:111902954-111981745 78791 15 32 2075 149 17 450 63 KCND3-AS1,KCND3,KCND3-IT1,LOC643355
SE_02_069500091 chr1:16894987-16926459 31472 91 9 1136 116 0 23 417 CROCC,RNVU1-18
SE_02_069500192 chr1:202905179-202924905 19726 192 10 521 54 2 52 202 KLHL12,ADIPOR1,LOC148709,RABIF,CYB5R1
SE_02_069500223 chr1:205953451-205976702 23251 223 11 1 48 0 0 0 LOC103021295,LOC103021296,CTSE,RAB7B,SLC26A9
SE_02_069500146 chr1:206550725-206577410 26685 146 9 695 75 4 43 211 RASSF5,EIF2D
SE_02_069500052 chr1:213982468-214003304 20836 52 11 473 25 4 344 497 PROX1-AS1,PROX1
SE_02_069500226 chr1:223628802-223646842 18040 226 9 607 69 0 34 33 CAPN8
SE_02_069500048 chr1:230726925-230754572 27647 48 14 948 133 2 6 149 CAPN9,AGT
SE_02_069500115 chr1:234600440-234624813 24373 115 8 651 42 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_069500264 chr1:23553816-23563039 9223 264 8 337 20 1 135 382 ID3,E2F2,LOC101928163
SE_02_069500160 chr1:27518297-27537392 19095 160 13 489 26 2 236 152 AHDC1,WASF2
SE_02_069500129 chr1:37055991-37079205 23214 129 14 804 29 2 100 0 GRIK3
SE_02_069500213 chr1:37289819-37307669 17850 213 12 519 22 1 76 0 MIR4255,LINC01137
SE_02_069500228 chr1:38918167-38919413 1246 228 1 34 2 0 9 113 RHBDL2,MYCBP,GJA9-MYCBP
SE_02_069500102 chr1:38968516-38970004 1488 102 1 43 3 1 0 0 RHBDL2,AKIRIN1
SE_02_069500005 chr1:39344372-39350908 6536 5 5 175 11 0 37 169 MACF1,KIAA0754
SE_02_069500008 chr1:39700502-39703261 2759 8 3 69 4 0 6 0 PPIE,NT5C1A,HPCAL4
SE_02_069500001 chr1:39817473-39853258 35785 1 11 987 117 6 160 440 TRIT1,OXCT2,BMP8B,MYCL
SE_02_069500191 chr1:39876958-39881639 4681 191 3 132 22 0 7 0 TRIT1,MYCL
SE_02_069500242 chr1:42332873-42341419 8546 242 6 208 8 1 37 325 FOXJ3,RIMKLA
SE_02_069500040 chr1:50965550-50985875 20325 40 14 429 20 1 197 657 CDKN2C,FAF1
SE_02_069500205 chr1:54253591-54274003 20412 205 14 656 43 5 89 151 SSBP3,SSBP3-AS1
SE_02_069500256 chr11:116052683-116073454 20771 256 7 646 3 3 135 0 LINC00900
SE_02_069500261 chr11:116193031-116229649 36618 261 7 1020 41 0 202 0 LINC00900
SE_02_069500071 chr11:116478643-116518829 40186 71 13 1301 12 7 270 55 BUD13
SE_02_069500111 chr11:12316932-12332236 15304 111 11 426 17 0 86 195 MICALCL,PARVA
SE_02_069500216 chr11:12676516-12707159 30643 216 8 815 5 1 112 0 TEAD1
SE_02_069500157 chr11:126799588-126831554 31966 157 12 984 7 3 187 0 KIRREL3,KIRREL3-AS2
SE_02_069500136 chr11:12761730-12787114 25384 136 12 729 1 0 104 80 TEAD1
SE_02_069500173 chr11:132126399-132143880 17481 173 16 590 8 2 89 0 NTM,NTM-IT
SE_02_069500229 chr11:17386444-17415631 29187 229 8 883 111 15 228 2694 ABCC8,KCNJ11,NCR3LG1
SE_02_069500209 chr11:18060118-18072352 12234 209 9 309 28 0 18 0 TPH1,SAA3P,SERGEF,MRGPRX3,SAAL1
SE_02_069500080 chr11:20001055-20037973 36918 80 10 1098 18 3 122 274 NAV2,NAV2-AS2
SE_02_069500038 chr11:4677231-4706476 29245 38 15 904 48 7 77 385 OR51E2,OR51D1,OR51E1
SE_02_069500260 chr11:47989893-48006922 17029 260 9 384 30 2 46 0 PTPRJ
SE_02_069500058 chr11:65476865-65500572 23707 58 13 709 77 4 11 347 MALAT1,SCYL1,MIR612
SE_02_069500197 chr11:76147878-76162917 15039 197 14 492 34 3 8 0 WNT11
SE_02_069500054 chr12:102948763-102963022 14259 54 9 341 11 0 198 456 ASCL1,PAH
SE_02_069500189 chr12:103239322-103250249 10927 189 12 232 2 0 55 0 C12ORF42,LOC101929058
SE_02_069500081 chr12:103264009-103279888 15879 81 9 388 7 2 68 244 C12ORF42,LOC101929058
SE_02_069500120 chr12:103369552-103389604 20052 120 14 578 22 4 128 0 C12ORF42
SE_02_069500239 chr12:106328688-106343340 14652 239 9 322 32 0 30 214 TCP11L2,POLR3B
SE_02_069500225 chr12:113987851-114007007 19156 225 9 605 35 1 36 0 RBM19
SE_02_069500105 chr12:117031365-117051687 20322 105 13 755 62 1 44 502 TESC,TESC-AS1,LOC100506551
SE_02_069500141 chr12:119353403-119379746 26343 141 10 624 33 0 15 0 CCDC60,LINC00934
SE_02_069500258 chr12:123041468-123066010 24542 258 8 506 32 0 62 0 PITPNM2,MIR4304,LOC100507091
SE_02_069500042 chr12:123085694-123140280 54586 42 14 1285 113 2 174 168 PITPNM2,LOC100507091
SE_02_069500233 chr12:16595235-16612895 17660 233 9 344 5 3 306 584 LMO3
SE_02_069500012 chr12:49187101-49235134 48033 12 17 1157 81 1 120 319 TUBA1A,TUBA1C
SE_02_069500172 chr12:52018168-52044396 26228 172 9 652 40 1 188 352 NR4A1,GRASP,OR7E47P,ATG101
SE_02_069500236 chr12:54351233-54360054 8821 236 5 199 9 1 112 134 LOC102724050,COPZ1,GPR84,ZNF385A,MIR148B
SE_02_069500029 chr12:57883404-57905431 22027 29 13 514 57 2 83 0 CTDSP2,LOC100506844,XRCC6BP1
SE_02_069500166 chr12:58498119-58507085 8966 166 10 265 7 1 41 0 LOC100506869
SE_02_069500153 chr12:66784705-66805964 21259 153 8 546 5 2 84 53 GRIP1
SE_02_069500030 chr12:68327669-68369970 42301 30 17 1077 70 7 97 186 MDM1
SE_02_069500162 chr12:69695058-69699295 4237 162 1 118 13 1 15 63 BEST3,LOC101928002,RAB3IP
SE_02_069500014 chr12:96985711-97024239 38528 14 22 1028 32 2 216 0 NEDD1
SE_02_069500019 chr12:97454582-97474666 20084 19 9 494 5 0 166 255 RMST,MIR1251
SE_02_069500128 chr12:97965509-97980780 15271 128 11 431 0 2 87 0 MIR4303,MIR4495
SE_02_069500190 chr13:21662709-21677474 14765 190 8 372 5 2 174 242 FGF9
SE_02_069500235 chr13:21883520-21895793 12273 235 9 391 10 3 0 0 LINC00424
SE_02_069500076 chr13:22059369-22082879 23510 76 11 698 11 1 142 0 LINC00540
SE_02_069500067 chr14:100470558-100504636 34078 67 18 940 44 0 101 119 WDR25,BEGAIN
SE_02_069500253 chr14:29212461-29222571 10110 253 9 242 1 0 221 0 LINC01551
SE_02_069500135 chr14:36496927-36516358 19431 135 13 452 17 0 160 213 SFTA3,NKX2-1-AS1,NKX2-1
SE_02_069500179 chr14:37583510-37600273 16763 179 11 372 21 6 246 735 TTC6,FOXA1
SE_02_069500232 chr14:49947022-49973462 26440 232 8 678 31 2 51 126 MIR6076,LINC01588
SE_02_069500207 chr14:51205754-51217505 11751 207 11 321 22 1 34 0 TMX1
SE_02_069500119 chr14:65830458-65850682 20224 119 13 611 13 3 86 0 MIR625
SE_02_069500072 chr14:65925326-65959794 34468 72 14 1047 4 6 109 0 MIR625
SE_02_069500263 chr14:69635842-69657938 22096 263 11 597 27 0 68 0 SUSD6
SE_02_069500096 chr14:69682874-69713213 30339 96 13 821 32 2 0 746 SUSD6,SRSF5
SE_02_069500269 chr14:69980262-70002417 22155 269 8 659 57 6 178 105 SMOC1,SLC8A3
SE_02_069500196 chr14:75237004-75260993 23989 196 7 600 30 1 192 0 FOS,LINC01220
SE_02_069500079 chr14:75810042-75834270 24228 79 8 565 41 0 127 71 TTLL5,TGFB3
SE_02_069500090 chr14:76946541-76977142 30601 90 6 832 69 3 93 0 IRF2BPL
SE_02_069500021 chr14:77007652-77053137 45485 21 18 1291 105 11 497 1041 IRF2BPL,LOC283575,CIPC,LOC102724190
SE_02_069500099 chr14:78307225-78344949 37724 99 10 1062 10 7 259 0 NRXN3
SE_02_069500117 chr14:91352637-91376054 23417 117 13 733 54 4 54 62 CCDC88C
SE_02_069500155 chr15:92808731-92840307 31576 155 14 959 20 0 49 0 LINC01578,ASB9P1
SE_02_069500248 chr16:11779987-11794631 14644 248 9 507 36 2 11 97 ZC3H7A,BCAR4,TXNDC11
SE_02_069500114 chr16:12231194-12258012 26818 114 13 1054 18 2 13 0 SNX29
SE_02_069500165 chr16:12306056-12338667 32611 165 9 1254 33 3 37 0 SNX29
SE_02_069500185 chr16:66325048-66344989 19941 185 12 627 41 4 59 0 CDH5
SE_02_069500184 chr16:72197303-72211966 14663 184 14 376 39 1 90 0 PMFBP1
SE_02_069500074 chr16:78990871-79023408 32537 74 15 2054 23 7 217 0 WWOX,MAF
SE_02_069500050 chr16:81618392-81653795 35403 50 25 1291 23 3 56 268 CMIP,LOC100129617,MIR6504
SE_02_069500118 chr16:85444223-85463963 19740 118 18 755 19 1 66 0 MIR5093
SE_02_069500057 chr16:87910041-87948571 38530 57 17 1887 47 3 17 215 CA5A,BANP,SLC7A5
SE_02_069500116 chr17:32100615-32127740 27125 116 15 788 80 0 0 0 RHOT1,ARGFXP2
SE_02_069500023 chr17:43231399-43252452 21053 23 6 0 0 0 0 0 RNU2-1,TMEM106A,LINC00854
SE_02_069500011 chr17:43266798-43301304 34506 11 15 0 0 0 0 0 RNU2-1,LINC00854
SE_02_069500259 chr17:48494107-48507437 13330 259 6 373 43 1 88 0 LOC101927166,HOXB-AS1,HOXB1,HOXB2
SE_02_069500243 chr17:50919319-50955211 35892 243 9 1012 98 1 109 0 TOB1
SE_02_069500026 chr17:57892779-57940450 47671 26 21 1272 69 3 190 149 CUEDC1,MRPS23,VEZF1
SE_02_069500241 chr17:59828166-59853274 25108 241 9 556 48 1 98 260 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_069500085 chr17:73683121-73723587 40466 85 16 1358 28 8 125 0 SDK2,LOC100134391
SE_02_069500138 chr17:73746709-73772841 26132 138 10 918 24 1 141 296 LOC100134391,LINC00469,LOC400620
SE_02_069500186 chr18:23876255-23889528 13273 186 9 322 11 0 15 177 LAMA3
SE_02_069500109 chr18:26458550-26471500 12950 109 8 359 24 1 25 175 KCTD1,LINC01543
SE_02_069500107 chr18:33122178-33134410 12232 107 15 261 17 0 115 0 CCDC178
SE_02_069500009 chr18:33742713-33764668 21955 9 16 520 2 6 179 580 ASXL3
SE_02_069500003 chr18:33800278-33837714 37436 3 13 1066 42 3 21 0 NOL4
SE_02_069500222 chr18:34219448-34226553 7105 222 5 153 0 0 147 352 NOL4
SE_02_069500177 chr18:42612954-42624960 12006 177 7 334 14 1 18 0 LINC00907
SE_02_069500224 chr18:42672742-42678443 5701 224 4 145 7 0 13 0 LINC00907,RIT2
SE_02_069500098 chr18:43571390-43588531 17141 98 12 466 0 1 0 0 SYT4
SE_02_069500142 chr18:44935653-44954832 19179 142 8 514 8 2 162 533 SETBP1,MIR4319
SE_02_069500047 chr18:45436486-45465901 29415 47 16 815 66 4 145 336 SLC14A2-AS1,SLC14A2
SE_02_069500104 chr18:45826559-45846032 19473 104 9 550 43 2 75 773 SIGLEC15
SE_02_069500180 chr18:46759770-46771978 12208 180 9 352 41 0 42 0 ST8SIA5
SE_02_069500027 chr18:48208583-48235406 26823 27 11 866 25 2 53 0 ZBTB7C
SE_02_069500002 chr18:48253903-48344854 90951 2 49 2602 41 14 253 86 ZBTB7C
SE_02_069500006 chr18:48858533-48928895 70362 6 32 2150 28 6 271 1226 SMAD7,CTIF
SE_02_069500132 chr18:50704541-50728237 23696 132 11 726 10 1 52 529 MAPK4,MRO
SE_02_069500148 chr18:55317804-55324520 6716 148 6 132 2 0 161 75 TCF4
SE_02_069500046 chr18:55406150-55424693 18543 46 10 409 16 5 197 72 TCF4
SE_02_069500252 chr18:57209362-57233191 23829 252 8 639 33 2 60 0 BOD1L2
SE_02_069500124 chr18:59082964-59098468 15504 124 7 494 19 8 25 0 SEC11C,OACYLP
SE_02_069500036 chr18:63132263-63159870 27607 36 16 762 7 6 121 0 BCL2
SE_02_069500061 chr18:63197426-63211075 13649 61 7 342 6 0 72 0 BCL2
SE_02_069500087 chr18:63257050-63271906 14856 87 11 419 17 1 63 0 BCL2
SE_02_069500103 chr18:67129414-67137525 8111 103 7 258 4 1 0 0 MIR5011
SE_02_069500214 chr18:76517581-76526002 8421 214 6 189 4 0 32 0 C18ORF65,LINC00908,ZNF516
SE_02_069500227 chr18:7940259-7963425 23166 227 7 668 10 3 58 187 PTPRM
SE_02_069500212 chr19:12778205-12794506 16301 212 4 375 30 1 300 517 JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1
SE_02_069500195 chr19:12952007-12983545 31538 195 6 911 46 2 143 1219 RAD23A,GADD45GIP1,DAND5,FARSA,NFIX,MIR6515,CALR,SYCE2,MIR5695
SE_02_069500018 chr19:13598244-13652848 54604 18 26 1633 82 1 41 0 CACNA1A,CCDC130
SE_02_069500221 chr19:38862852-38885351 22499 221 7 613 45 0 75 2001 SIRT2,RINL,SARS2,ECH1,MRPS12,HNRNPL,NFKBIB,LGALS4,CCER2
SE_02_069500043 chr19:41730647-41752485 21838 43 17 608 51 0 17 5 CEACAM5,CEACAM3,CEACAM7,CEACAM6
SE_02_069500149 chr19:43562407-43584829 22422 149 11 572 88 3 28 1192 XRCC1,PINLYP,IRGQ,ZNF575,SRRM5,ZNF428,ZNF576,ETHE1
SE_02_069500257 chr19:49393813-49410760 16947 257 6 492 72 1 54 1210 CCDC155,DKKL1,PIH1D1,PTH2,LOC101928295,TEAD2,ALDH16A1,GFY,SLC17A7
SE_02_069500201 chr19:55252954-55277329 24375 201 9 702 52 2 90 907 PPP6R1,HSPBP1,TMEM86B,MIR6804,PTPRH,BRSK1,MIR6802,TMEM150B,MIR6803
SE_02_069500108 chr19:5948491-5968047 19556 108 18 556 25 1 2 170 RANBP3,VMAC,NDUFA11,LOC100128568,CAPS
SE_02_069500069 chr19:6056485-6092438 35953 69 13 942 65 5 24 0 RFX2,ACSBG2
SE_02_069500062 chr2:172071121-172100103 28982 62 18 676 23 1 687 1062 DLX1,METAP1D,DLX2,DLX2-AS1
SE_02_069500178 chr2:223591267-223614778 23511 178 8 632 6 4 151 330 SCG2
SE_02_069500127 chr2:2320320-2333616 13296 127 10 362 5 0 178 421 MYT1L,MYT1L-AS1
SE_02_069500086 chr2:23533621-23555362 21741 86 21 724 57 1 128 0 KLHL29
SE_02_069500200 chr2:23583525-23602635 19110 200 12 584 22 0 89 0 KLHL29
SE_02_069500244 chr2:24228002-24243215 15213 244 13 322 27 0 54 216 ITSN2,FAM228A,FAM228B
SE_02_069500215 chr2:25279238-25314670 35432 215 8 895 27 2 134 506 DNMT3A,MIR1301
SE_02_069500065 chr2:75467385-75502643 35258 65 15 997 44 1 62 190 EVA1A,LOC101927884
SE_02_069500051 chr20:20192858-20238738 45880 51 13 1203 40 1 260 251 CFAP61,INSM1
SE_02_069500202 chr20:21520271-21536051 15780 202 11 391 13 0 175 0 NKX2-2,LOC101929625
SE_02_069500033 chr20:21578049-21616411 38362 33 22 1074 54 5 164 85 LOC101929625,LOC101929608
SE_02_069500210 chr20:22455778-22470876 15098 210 10 404 4 7 62 0 LOC284788
SE_02_069500049 chr20:22488250-22516281 28031 49 13 823 13 0 115 0 LINC00261
SE_02_069500039 chr20:22559751-22582773 23022 39 15 755 27 2 303 1081 FOXA2,LINC00261,LINC01384
SE_02_069500170 chr20:23107886-23142052 34166 170 13 1110 108 21 48 575 LINC00656,CD93
SE_02_069500004 chr21:23455767-23489302 33535 4 21 1091 10 3 7 0 D21S2088E,LOC101927869
SE_02_069500066 chr21:23569573-23583911 14338 66 16 502 1 2 2 0 D21S2088E,LOC101927869
SE_02_069500100 chr21:38897314-38926379 29065 100 14 887 52 6 79 0 LOC400867,LOC101928398
SE_02_069500101 chr21:38952701-38966195 13494 101 9 410 5 3 29 0 LOC400867,LOC101928435
SE_02_069500254 chr21:38983940-38991401 7461 254 6 278 21 3 24 0 LOC400867,LOC101928435
SE_02_069500125 chr21:40044209-40061915 17706 125 12 538 40 1 85 141 DSCAM,MIR4760
SE_02_069500025 chr21:42513448-42583894 70446 25 20 2381 317 7 130 1861 SLC37A1,RSPH1,LOC101928233
SE_02_069500133 chr21:43263948-43291243 27295 133 10 138 10 0 0 0 LINC00322
SE_02_069500082 chr21:44679677-44710032 30355 82 11 1090 125 1 29 471 KRTAP12-1,KRTAP10-12,TSPEAR,KRTAP10-10,KRTAP12-4,KRTAP12-3,KRTAP10-11,KRTAP12-2
SE_02_069500088 chr22:17256649-17273165 16516 88 11 501 8 1 85 529 CECR3,CECR1
SE_02_069500078 chr22:19273494-19294336 20842 78 9 623 74 7 0 216 CLTCL1
SE_02_069500045 chr22:20750042-20796900 46858 45 15 1419 177 0 93 1150 SERPIND1,PI4KA,TMEM191A
SE_02_069500161 chr22:23107209-23119124 11915 161 10 323 29 0 11 0 GNAZ,RSPH14,RAB36
SE_02_069500152 chr22:24942573-24978488 35915 152 7 987 46 1 34 0 KIAA1671,TMEM211
SE_02_069500204 chr22:25403536-25421120 17584 204 9 665 94 0 37 0 MIR6817,CRYBB2P1,LRP5L
SE_02_069500089 chr22:25909029-25945007 35978 89 7 1130 44 5 41 172 MYO18B
SE_02_069500140 chr22:26055615-26084593 28978 140 7 758 20 1 30 0 SEZ6L
SE_02_069500037 chr22:26642353-26661648 19295 37 9 535 67 6 0 137 MIAT,MIATNB,CRYBA4,CRYBB1
SE_02_069500022 chr22:29691275-29718525 27250 22 23 765 80 2 137 778 NF2,UQCR10,ZMAT5,CABP7
SE_02_069500092 chr22:45996985-46014698 17713 92 11 618 49 0 50 920 LOC730668,WNT7B,LINC00899,PRR34-AS1,PRR34
SE_02_069500234 chr22:46039078-46045064 5986 234 1 170 13 0 9 487 LINC00899,PRR34,MIR3619,PRR34-AS1,LOC730668,MIRLET7BHG
SE_02_069500238 chr22:46063594-46069846 6252 238 1 168 7 0 40 0 PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B
SE_02_069500063 chr3:126817823-126875366 57543 63 15 1519 108 0 122 64 CHCHD6,PLXNA1
SE_02_069500130 chr3:130829418-130854267 24849 130 7 666 38 0 79 64 ATP2C1
SE_02_069500093 chr3:133113868-133138141 24273 93 15 601 31 4 70 82 TMEM108
SE_02_069500137 chr3:141383908-141412876 28968 137 11 630 30 8 185 299 ZBTB38,RASA2
SE_02_069500151 chr4:138890604-138919690 29086 151 12 803 30 4 129 0 NOCT
SE_02_069500193 chr4:16115543-16137615 22072 193 8 605 47 3 39 0 PROM1
SE_02_069500247 chr4:26234147-26248642 14495 247 7 356 6 0 53 0 RBPJ
SE_02_069500169 chr4:41437589-41454083 16494 169 7 406 17 2 49 0 LIMCH1
SE_02_069500198 chr4:54929852-54947515 17663 198 5 516 3 1 79 0 KDR,KIT
SE_02_069500175 chr4:8032916-8051626 18710 175 15 733 13 3 19 207 ABLIM2,MIR95
SE_02_069500068 chr5:10284309-10317290 32981 68 11 967 93 1 28 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_069500188 chr5:1291513-1317229 25716 188 8 820 39 10 39 617 TERT,MIR4457,CLPTM1L
SE_02_069500262 chr5:14185525-14205576 20051 262 7 505 19 0 27 0 TRIO
SE_02_069500255 chr5:14249399-14265402 16003 255 6 480 16 1 36 0 TRIO
SE_02_069500028 chr5:14428182-14465415 37233 28 20 1089 11 1 113 217 TRIO,FAM105A
SE_02_069500056 chr5:14732473-14768568 36095 56 14 996 68 4 108 336 ANKH,LOC100130744
SE_02_069500249 chr5:17987136-17992736 5600 249 5 138 4 0 37 0 LOC401177
SE_02_069500024 chr5:370828-402621 31793 24 12 1021 103 0 31 94 AHRR,EXOC3-AS1,EXOC3
SE_02_069500230 chr5:38531288-38542281 10993 230 12 313 4 0 16 0 LIFR,LIFR-AS1,MIR3650
SE_02_069500145 chr5:52032372-52046450 14078 145 18 344 0 0 122 0 LOC642366
SE_02_069500251 chr5:52140574-52150310 9736 251 7 264 1 1 24 0 PELO,LOC642366
SE_02_069500020 chr5:52230532-52272661 42129 20 22 1153 39 3 149 0 PELO,MOCS2
SE_02_069500203 chr5:52344465-52358009 13544 203 14 332 8 1 49 0 PELO,MOCS2
SE_02_069500013 chr5:6502984-6551816 48832 13 22 1690 193 12 15 0 LINC01018
SE_02_069500167 chr5:69708186-69729374 21188 167 18 0 0 0 0 103 GUSBP3,LOC100272216,GTF2H2B
SE_02_069500123 chr5:69825178-69848392 23214 123 21 3 0 0 0 123 SMA4,SERF1A
SE_02_069500126 chr5:70286566-70308828 22262 126 22 10 1 0 0 102 SMA4,GUSBP3
SE_02_069500131 chr5:70383495-70405993 22498 131 24 14 1 0 0 132 GUSBP3,LOC441081
SE_02_069500217 chr5:70587655-70603929 16274 217 16 0 0 0 0 0 SMA5,GUSBP3,GUSBP9
SE_02_069500139 chr5:70701729-70721454 19725 139 23 5 0 0 0 126 GUSBP3
SE_02_069500163 chr5:71287529-71308654 21125 163 19 27 0 0 0 103 PMCHL2
SE_02_069500083 chr5:93894988-93914957 19969 83 15 390 16 1 83 0 FAM172A,POU5F2
SE_02_069500156 chr5_GL339449v2_alt:1284737-1307080 22343 156 17 0 0 0 0 0 SMA4
SE_02_069500168 chr5_GL339449v2_alt:710920-732843 21923 168 20 0 0 0 0 0 SMA4,SMA5
SE_02_069500154 chr5_GL339449v2_alt:827624-851865 24241 154 19 0 0 0 0 0 GUSBP3
SE_02_069500159 chr5_KI270897v1_alt:31169-53113 21944 159 18 0 0 0 0 0 SMA4
SE_02_069500174 chr5_KI270897v1_alt:817532-838503 20971 174 15 0 0 0 0 0 SMA4,SMA5
SE_02_069500034 chr6:123318823-123358296 39473 34 29 1058 19 2 19 213 TRDN,HRAT13,CLVS2
SE_02_069500041 chr6:144728103-144758478 30375 41 28 752 20 1 124 206 UTRN,SF3B5
SE_02_069500231 chr6:147122610-147133436 10826 231 13 230 0 0 36 33 STXBP5-AS1,LUADT1
SE_02_069500150 chr6:3136010-3163429 27419 150 11 824 120 0 146 883 BPHL,TUBB2A,LOC100507194
SE_02_069500266 chr6:3223122-3232924 9802 266 6 218 13 0 123 720 TUBB2B,PSMG4,LOC100507194
SE_02_069500268 chr6:3539921-3568401 28480 268 9 808 12 2 25 0 SLC22A23
SE_02_069500094 chr6:37482205-37516080 33875 94 11 979 117 6 128 440 LOC100505530,CCDC167,CMTR1,MIR4462
SE_02_069500240 chr6:39326231-39343043 16812 240 13 499 85 8 17 330 KIF6,KCNK17,KCNK16
SE_02_069500245 chr6:41705430-41729335 23905 245 12 704 40 3 104 307 TFEB,PGC
SE_02_069500095 chr6:43874178-43912293 38115 95 10 1054 19 0 195 156 LINC01512
SE_02_069500181 chr6:52716024-52728970 12946 181 15 351 31 0 0 0 TMEM14A,GSTA7P,GSTA2
SE_02_069500147 chr6:7136976-7156426 19450 147 13 501 12 4 128 0 RREB1
SE_02_069500097 chr7:130350542-130369542 19000 97 10 542 56 2 127 852 CPA5,CPA1
SE_02_069500112 chr7:130421392-130444794 23402 112 7 569 64 0 120 283 CEP41,MEST,CPA1,MESTIT1
SE_02_069500164 chr7:132365853-132388082 22229 164 12 702 32 7 106 217 PLXNA4
SE_02_069500122 chr7:29311092-29348596 37504 122 9 1142 68 6 122 0 CHN2,LOC102724484
SE_02_069500218 chr7:44377520-44397775 20255 218 12 538 45 1 0 780 NUDCD3,CAMK2B
SE_02_069500176 chr7:55501893-55527433 25540 176 11 755 138 0 11 59 VOPP1
SE_02_069500077 chr7:67018735-67043958 25223 77 17 706 131 0 3 48 TYW1,SBDS
SE_02_069500246 chr7:69825356-69848328 22972 246 10 534 19 6 59 0 AUTS2
SE_02_069500187 chr7:73428152-73451538 23386 187 9 612 18 7 189 1297 FZD9,BAZ1B
SE_02_069500250 chr7:76294404-76319313 24909 250 7 890 110 2 63 904 HSPB1,YWHAG
SE_02_069500182 chr7:94443981-94453633 9652 182 10 250 16 1 63 0 COL1A2
SE_02_069500199 chr7:94509208-94516361 7153 199 5 176 10 0 0 225 CASD1
SE_02_069500121 chr7:95468094-95477055 8961 121 8 219 9 1 68 0 ASB4,PON2
SE_02_069500044 chr7:95897289-95932995 35706 44 17 842 26 3 214 0 DYNC1I1
SE_02_069500220 chr7:96034523-96053629 19106 220 9 439 24 0 83 102 DYNC1I1,MIR591
SE_02_069500007 chr7:96066538-96095099 28561 7 16 672 29 1 224 146 DYNC1I1,MIR591
SE_02_069500106 chr8:101229411-101253078 23667 106 11 741 27 2 26 0 ZNF706
SE_02_069500016 chr8:11409230-11474899 65669 16 27 3006 379 18 140 1395 FAM167A-AS1,FAM167A,BLK
SE_02_069500110 chr8:12943110-12955555 12445 110 12 550 60 4 35 50 KIAA1456
SE_02_069500084 chr8:19079747-19098846 19099 84 10 677 10 2 40 0 PSD3
SE_02_069500158 chr8:49248202-49255226 7024 158 4 208 5 0 0 0 C8ORF22
SE_02_069500075 chr8:52246914-52273426 26512 75 15 722 12 1 213 0 ST18
SE_02_069500070 chr8:52328350-52352816 24466 70 18 683 3 0 75 0 ST18
SE_02_069500206 chr8:57529216-57541346 12130 206 9 352 7 1 23 0 LOC101929488
SE_02_069500237 chr8:59108856-59119187 10331 237 7 233 3 0 154 85 TOX
SE_02_069500017 chr8:60982617-61024330 41713 17 24 1078 1 2 282 0 LOC100130298
SE_02_069500059 chr8:6815991-6841480 25489 59 10 1283 47 3 41 613 XKR5,GS1-24F4.2,DEFB1
SE_02_069500211 chr8:69585909-69603298 17389 211 6 496 11 1 92 317 SULF1
SE_02_069500143 chr8:70173146-70195280 22134 143 9 570 23 3 59 34 NCOA2,PRDM14
SE_02_069500144 chr8:72872341-72888773 16432 144 8 285 7 2 25 0 KCNB2,TERF1
SE_02_069500219 chr8:80136685-80152753 16068 219 9 440 82 2 16 0 TPD52
SE_02_069500053 chr8:80168089-80210702 42613 53 17 1169 98 6 47 231 TPD52,MIR5708
SE_02_069500171 chr9:113465804-113493099 27295 171 15 669 53 10 85 282 RGS3
SE_02_069500208 chr9:132622177-132639991 17814 208 6 529 28 1 117 260 DDX31,GTF3C4,BARHL1
SE_02_069500064 chr9:133609435-133665493 56058 64 13 2160 137 21 131 2250 DBH,SARDH,DBH-AS1,FAM163B
SE_02_069500031 chr9:13428397-13449993 21596 31 9 651 13 0 206 70 FLJ41200
SE_02_069500073 chr9:13550794-13570370 19576 73 10 730 0 2 56 0 FLJ41200
SE_02_069500032 chr9:14310100-14329818 19718 32 10 445 1 0 267 191 NFIB
SE_02_069500035 chr9:14342451-14353318 10867 35 6 338 3 0 56 0 NFIB
SE_02_069500265 chr9:22371425-22380109 8684 265 7 280 26 2 43 0 DMRTA1
SE_02_069500060 chr9:2285657-2302023 16366 60 11 615 3 11 38 0 SMARCA2
SE_02_069500267 chr9:33515057-33528560 13503 267 6 314 42 1 0 150 ANKRD18B,SUGT1P1,MIR6851,NOL6
SE_02_069500113 chr9:33686734-33701015 14281 113 8 306 62 1 0 0 PTENP1-AS,PRSS3,PTENP1,LINC01251
SE_02_069500134 chr9:35756761-35776913 20152 134 7 440 36 1 22 0 MSMP,MIR6852,SPAG8,NPR2,MIR6853,RGP1,TLN1,GBA2,HINT2,CREB3
SE_02_069500010 chr9:37962968-38028689 65721 10 42 1968 198 10 179 206 SHB
SE_02_069500055 chr9:89661170-89688419 27249 55 17 1001 28 5 99 263 UNQ6494
SE_02_069500183 chr9:89850330-89881564 31234 183 8 0 13 0 0 0 LOC101927847

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM3165667
Input ID: Name:GSM3165668
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb