SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000103047
Gene: TANGO6 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:68843531-69085182 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103500011 chr16:68624506-68831859 Sample_02_1035 Mammary gland HCC70_Vehicle 11 124 5594 613 10 446 2877 CDH1,CDH3,MIR7641-2,TANGO6
SE_02_077500135 chr16:68683361-68798063 Sample_02_0775 Pancreas EndoC-BH1_SE 135 35 3145 395 5 193 1072 CDH1,CDH3,MIR7641-2,TANGO6
SE_02_125300081 chr16:68689283-68807001 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 81 39 3204 391 7 183 849 CDH1,CDH3,MIR7641-2,TANGO6
SE_02_101700463 chr16:68698008-68800325 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 463 22 2767 348 6 152 483 CDH1,CDH3,MIR7641-2,TANGO6
SE_02_153900020 chr16:68704558-68823529 Sample_02_1539 Nasopharyngeal C666-1 20 51 3192 368 7 179 993 CDH1,MIR7641-2,TANGO6
SE_02_056300054 chr16:68704623-68811199 Sample_02_0563 Mammary gland MCF7L-P_0h 54 41 2848 342 6 164 535 CDH1,MIR7641-2,TANGO6
SE_02_056600054 chr16:68704688-68798730 Sample_02_0566 Mammary gland MCF7L-P_E2_24h 54 30 2522 316 4 143 289 CDH1,MIR7641-2,TANGO6
SE_02_103100057 chr16:68704769-68804353 Sample_02_1031 Head and neck SCC1 contol 57 32 2689 327 5 148 365 CDH1,MIR7641-2,TANGO6
SE_00_005400041 chr16:68704916-68793714 Sample_00_0054 Pancreas pancreas 30y 41 50 2399 303 4 140 289 CDH1,MIR7641-2,TANGO6
SE_02_109300105 chr16:68721897-68800990 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 105 26 2154 258 5 127 289 CDH1,MIR7641-2,TANGO6
SE_02_109200119 chr16:68721912-68801156 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 119 22 2156 258 5 127 289 CDH1,MIR7641-2,TANGO6
SE_02_108600117 chr16:68722059-68801142 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 117 21 2151 258 5 127 289 CDH1,MIR7641-2,TANGO6
SE_02_108700095 chr16:68722153-68800840 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 95 22 2146 258 5 127 289 CDH1,MIR7641-2,TANGO6
SE_02_123400131 chr16:68722362-68800834 Sample_02_1234 Mammary gland T47D_Full 131 20 2143 258 5 127 289 CDH1,MIR7641-2,TANGO6
SE_02_143500093 chr16:68722612-68824275 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 93 13 2759 302 7 162 1030 CDH1,MIR7641-2,TANGO6
SE_02_108800145 chr16:68722626-68800865 Sample_02_1088 Mammary gland T47D_shCtrl_45min 145 22 2140 256 5 126 289 CDH1,MIR7641-2,TANGO6
SE_02_101600226 chr16:68722655-68800292 Sample_02_1016 Embryo H9_Mesendoderm_24h 226 15 2122 255 5 126 289 CDH1,MIR7641-2,TANGO6
SE_02_109000090 chr16:68722659-68801221 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 90 25 2146 256 5 126 289 CDH1,MIR7641-2,TANGO6
SE_02_050400143 chr16:68725135-68801000 Sample_02_0504 Esophagus KYSE510_1 143 31 2067 239 4 125 289 CDH1,MIR7641-2,TANGO6
SE_02_048000279 chr16:68726004-68802374 Sample_02_0480 Gingival epithelial HGEP 279 30 2078 235 4 126 365 CDH1,MIR7641-2,TANGO6
SE_02_053000275 chr16:68726051-68800375 Sample_02_0530 Mammary gland MCF10A 275 18 2021 234 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_143400081 chr16:68728630-68824457 Sample_02_1434 Trophoblast trophoblast stem cells 81 21 2583 275 6 158 1030 CDH1,MIR7641-2,TANGO6
SE_02_062500109 chr16:68730209-68799510 Sample_02_0625 Mammary gland WS8_4OHT 109 18 1857 213 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_062600119 chr16:68730252-68800735 Sample_02_0626 Mammary gland WS8_E2 119 17 1897 217 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_061900030 chr16:68731136-68823076 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 30 25 2464 255 6 155 963 CDH1,MIR7641-2,TANGO6
SE_02_116700186 chr16:68731516-68800311 Sample_02_1167 Biliary H69_TGF Vehicle_1 186 29 1851 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_056800066 chr16:68731529-68798168 Sample_02_0568 Mammary gland MCF7L_E2_4h 66 20 1790 203 3 119 289 CDH1,MIR7641-2,TANGO6
SE_02_062300181 chr16:68731533-68800131 Sample_02_0623 Mammary gland TAMR_E2 181 14 1844 208 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_157500160 chr16:68731536-68799235 Sample_02_1575 Mammary gland MCF7_Mock 160 20 1821 207 4 122 289 CDH1,MIR7641-2,TANGO6,CDH3
SE_02_113200238 chr16:68731543-68800845 Sample_02_1132 Pancreas KLM1 wt 238 26 1864 212 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_102500071 chr16:68731547-68824683 Sample_02_1025 Esophagus KYSE150 71 19 2502 259 6 159 1030 CDH1,MIR7641-2,TANGO6
SE_02_062400206 chr16:68731548-68800846 Sample_02_0624 Mammary gland TAMR_VEH 206 16 1864 212 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_056400083 chr16:68731552-68800897 Sample_02_0564 Mammary gland MCF7L-P_E2_1h 83 24 1866 212 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_116900751 chr16:68731557-68800378 Sample_02_1169 Biliary H69_TGF beta_16h_2 751 24 1851 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_157800124 chr16:68731562-68799410 Sample_02_1578 Mammary gland MCF7_DAC+455 124 19 1821 208 4 122 289 CDH1,MIR7641-2,TANGO6,CDH3
SE_02_157700114 chr16:68731565-68798437 Sample_02_1577 Mammary gland MCF7_DAC 114 18 1796 203 3 119 289 CDH1,MIR7641-2,TANGO6,CDH3
SE_02_082600220 chr16:68731583-68799933 Sample_02_0826 Stomach gastric tumor 220 36 1832 208 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_109100074 chr16:68731588-68800891 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 74 25 1866 212 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_157000205 chr16:68731592-68808584 Sample_02_1570 iPSCs EiPSC 205 23 2063 225 5 133 406 CDH1,MIR7641-2,TANGO6
SE_02_155100155 chr16:68731606-68805962 Sample_02_1551 Gastrointestinal Stromal MaMel 155 29 2005 222 5 127 365 CDH1,MIR7641-2,TANGO6
SE_02_116800201 chr16:68731607-68800331 Sample_02_1168 Biliary H69_TGF Vehicle_2 201 23 1850 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_085300143 chr16:68731619-68800280 Sample_02_0853 Mammary gland MCF7L-TamR 143 20 1849 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_108900155 chr16:68731646-68800818 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 155 22 1864 212 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_047900243 chr16:68731667-68806935 Sample_02_0479 Head and neck SCC25 243 45 2033 223 5 127 365 CDH1,MIR7641-2,TANGO6
SE_02_127800163 chr16:68731677-68801278 Sample_02_1278 Chordoma UCH1_DMSO_48h 163 17 1873 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_157200220 chr16:68731688-68800414 Sample_02_1572 iPSCs FiPSC 220 20 1850 210 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_156700168 chr16:68731755-68800508 Sample_02_1567 iPSCs CiPSC 168 13 1855 211 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_098900411 chr16:68731854-68806095 Sample_02_0989 Kidney kidney cortex_WT 411 24 2001 219 5 127 365 CDH1,MIR7641-2,TANGO6
SE_01_010300031 chr16:68731860-68800614 Sample_01_0103 Pancreas pancreas_37y 31 19 1853 209 4 122 289 CDH1,MIR7641-2,TANGO6
SE_01_010100049 chr16:68732023-68805944 Sample_01_0101 Pancreas pancreas_54y 49 31 1994 219 5 127 365 CDH1,MIR7641-2,TANGO6
SE_02_138500218 chr16:68732123-68806902 Sample_02_1385 Other iPSCs 218 18 2018 221 5 127 365 CDH1,MIR7641-2,TANGO6
SE_02_101500111 chr16:68732200-68808811 Sample_02_1015 Embryo H9_ Undifferentiated 111 23 2056 222 5 137 434 CDH1,MIR7641-2,TANGO6
SE_02_077000693 chr16:68732215-68800947 Sample_02_0770 Ovary OVCA429_shLuc 693 33 1852 209 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_052500064 chr16:68732217-68793649 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 64 22 1670 189 3 119 289 CDH1,MIR7641-2,TANGO6
SE_02_074200086 chr16:68732225-68800007 Sample_02_0742 Embryo ESCs_day0 86 19 1822 205 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_151300086 chr16:68732239-68801385 Sample_02_1513 Lung Transitional AT2->1 cells 86 25 1862 209 4 122 289 CDH1,MIR7641-2,TANGO6
SE_02_067500020 chr16:68733167-68799526 Sample_02_0675 Embryo H1 hESC-derived neural progenitor cells_Smad_0hr 20 21 1785 204 4 118 289 CDH1,MIR7641-2,TANGO6
SE_02_117300398 chr16:68738994-68800858 Sample_02_1173 Brain GBM01 398 37 1666 182 4 94 0 CDH1,MIR7641-2,TANGO6
SE_02_080800373 chr16:68739020-68805887 Sample_02_0808 Ovary RMG1_ARID1A KO 373 35 1801 192 5 99 76 CDH1,MIR7641-2,TANGO6
SE_02_151000137 chr16:68739775-68831880 Sample_02_1510 Lung H3122_LR_Pano 137 44 2469 250 6 144 856 CDH1,MIR7641-2,TANGO6
SE_02_058800297 chr16:68740094-68811873 Sample_02_0588 Cervix HeLa Kyoto_untreated 297 19 1927 198 5 116 304 CDH1,MIR7641-2,TANGO6
SE_02_121300286 chr16:68741374-68803532 Sample_02_1213 Brain GBM31 286 24 1681 174 4 97 76 CDH1,MIR7641-2,TANGO6
SE_02_072600163 chr16:68741462-68800185 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 163 19 1577 168 4 93 0 CDH1,MIR7641-2,TANGO6
SE_02_120300364 chr16:68741691-68800879 Sample_02_1203 Brain NB1 364 18 1599 172 4 93 0 CDH1,MIR7641-2,TANGO6
SE_02_119601174 chr16:68741791-68793752 Sample_02_1196 Brain GBM32 1174 22 1419 151 3 90 0 CDH1,MIR7641-2,TANGO6
SE_02_116000035 chr16:68742407-68796455 Sample_02_1160 Embryo H1_shLuc 35 16 1466 158 3 89 0 CDH1,MIR7641-2,TANGO6
SE_02_120400444 chr16:68744896-68800407 Sample_02_1204 Brain NB2 444 13 1494 166 4 73 0 CDH1,TANGO6
SE_02_101300334 chr16:68757085-68793717 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 334 18 1018 120 3 45 0 CDH1,TANGO6
SE_02_096200744 chr16:68760247-68800444 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 744 12 1095 130 3 48 0 CDH1,TANGO6
SE_02_145700177 chr16:68762024-68799986 Sample_02_1457 Embryo HUES8 WT 177 9 1037 125 3 40 0 CDH1,TANGO6
SE_00_005800556 chr16:68776812-68793635 Sample_00_0058 Stomach stomach 34y 556 8 471 56 1 29 0 CDH1,TANGO6
SE_02_049400201 chr16:68776890-68800340 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 201 7 633 75 2 32 0 CDH1,TANGO6
SE_02_135900751 chr16:68776915-68811903 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 751 17 937 96 3 54 311 CDH1,TANGO6
SE_02_049500177 chr16:68776929-68799469 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 177 8 603 72 2 32 0 CDH1,TANGO6
SE_02_136201150 chr16:68776983-68803082 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 1150 10 711 78 2 36 76 CDH1,TANGO6
SE_02_151400873 chr16:68777467-68811262 Sample_02_1514 Lung Differentiated AT1-like cells 873 11 904 93 3 53 246 CDH1,TANGO6
SE_02_136101279 chr16:68777804-68803022 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1279 9 684 75 2 36 76 CDH1,TANGO6
SE_02_067700197 chr16:68777989-68800257 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 197 7 601 72 2 32 0 CDH1,TANGO6
SE_02_107800233 chr16:68778481-68800208 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 233 16 581 70 2 32 0 CDH1,TANGO6
SE_02_149300659 chr16:68778487-68800476 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 659 6 584 72 2 32 0 CDH1,TANGO6
SE_02_096000426 chr16:68778933-68800689 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 426 7 580 72 2 30 0 CDH1,TANGO6
SE_02_074000859 chr16:68781875-68793990 Sample_02_0740 Muscle RH3 859 5 322 43 1 25 0 CDH1,TANGO6
SE_02_135200930 chr16:68782300-68826719 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 930 10 1179 113 4 62 741 CDH1,TANGO6
SE_01_011500768 chr16:68786213-68824580 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 768 9 1019 91 4 57 741 CDH1,TANGO6
SE_02_086800878 chr16:68787222-68824532 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 878 15 993 89 3 47 741 CDH1,TANGO6
SE_02_086700438 chr16:68789194-68826609 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 438 27 993 84 3 45 741 CDH1,TANGO6
SE_02_061000549 chr16:68790058-68826540 Sample_02_0610 Liposarcoma MLS 1765-92 549 6 968 81 3 45 741 CDH1,TANGO6
Genomic distribution of SEs associated with TANGO6
Genome Browser

The strength of the tissue affected by the gene

Expression of TANGO6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)