SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109100074
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr16:68731588-68800891
Size: 69303
Super-enhancer rank 74
Number of SE elements: 25
ChIP density(Case|Control): 41165.982|7172.8605
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDH1 ;
ROSE Overlap CDH1 ; MIR7641-2 ;
ROSE Proximal TANGO6 ;
ROSE Closest CDH1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR7641-2 ; CDH1 ; TANGO6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100074 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers