Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000241313
Gene: WWTR1-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr3:149656999-149661364 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_082800010 chr3:149479249-149662376 Sample_02_0828 Lung H1703 Control-infected 10 8 5069 326 22 444 1576 WWTR1-AS1,WWTR1,TM4SF4
SE_02_094900004 chr3:149497142-149661195 Sample_02_0949 Umbilical artery HUAEC_WT 4 113 4457 202 19 423 1465 WWTR1-AS1,WWTR1,TM4SF4
SE_02_082900007 chr3:149500976-149662745 Sample_02_0829 Lung H1703 SMARCA4-infected 7 27 4383 175 19 418 1414 WWTR1-AS1,WWTR1,TM4SF4
SE_02_125700005 chr3:149501137-149661587 Sample_02_1257 Pancreas pancreatic cancer cells 5 21 4340 174 19 413 1414 WWTR1-AS1,WWTR1,TM4SF4
SE_02_083000008 chr3:149501188-149662953 Sample_02_0830 Lung H1703 SMARCA2-infected 8 28 4382 175 19 418 1414 WWTR1-AS1,WWTR1,TM4SF4
SE_02_124000002 chr3:149501220-149660403 Sample_02_1240 Skin MCC13_virus_negative 2 78 4302 168 19 410 1318 WWTR1-AS1,WWTR1,TM4SF4
SE_02_072300058 chr3:149512504-149661410 Sample_02_0723 Pancreas MIAPaca2 WT 58 68 3976 138 14 402 1308 WWTR1-AS1,WWTR1,TM4SF4
SE_02_096300005 chr3:149513076-149661361 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 5 31 3954 135 14 400 1307 WWTR1-AS1,WWTR1,TM4SF4
SE_02_085800004 chr3:149513767-149659629 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 4 16 3877 129 14 396 1121 WWTR1-AS1,WWTR1,TM4SF4
SE_02_138300018 chr3:149516148-149661278 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 18 99 3841 130 13 399 1298 WWTR1-AS1,WWTR1,TM4SF4
SE_02_066000009 chr3:149521634-149659281 Sample_02_0660 Mammary gland MCF10DCIS 9 61 3643 122 13 353 761 WWTR1-AS1,WWTR1,TM4SF4
SE_02_138100017 chr3:149523896-149661158 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 17 97 3640 127 13 355 961 WWTR1-AS1,WWTR1,TM4SF4
SE_02_083100011 chr3:149525976-149661105 Sample_02_0831 Umblical vein HUVECs_TNF0min 11 100 3567 125 13 350 902 WWTR1-AS1,WWTR1,COMMD2,TM4SF4,TM4SF1
SE_02_149300003 chr3:149526062-149662803 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 3 48 3620 129 13 355 943 WWTR1-AS1,WWTR1
SE_02_156900006 chr3:149526264-149660693 Sample_02_1569 Endothelial Endothelial cells 6 53 3548 124 13 346 833 WWTR1-AS1,WWTR1
SE_01_010700377 chr3:149526458-149661326 Sample_01_0107 Esophagus esophagus squamous epithelium 377 36 3559 125 13 346 896 WWTR1-AS1,WWTR1
SE_02_130800004 chr3:149526462-149659872 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 4 40 3514 120 13 343 753 WWTR1-AS1,WWTR1
SE_01_009300074 chr3:149526635-149661352 Sample_01_0093 Aorta ascending aorta 74 60 3553 125 13 346 901 WWTR1-AS1,WWTR1
SE_02_090700136 chr3:149526704-149660675 Sample_02_0907 Heart left ventricle_DCM_LV1223 136 59 3532 124 13 344 830 WWTR1-AS1,WWTR1
SE_02_090800150 chr3:149526779-149660313 Sample_02_0908 Heart left ventricle_DCM_LV1262 150 68 3520 122 13 344 805 WWTR1-AS1,WWTR1
SE_02_118600024 chr3:149526806-149660322 Sample_02_1186 Brain GBM15 24 45 3520 122 13 344 806 WWTR1-AS1,WWTR1
SE_02_098900096 chr3:149526890-149671381 Sample_02_0989 Kidney kidney cortex_WT 96 48 3893 179 14 362 974 WWTR1-AS1,WWTR1
SE_02_130900008 chr3:149527303-149659886 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 8 32 3496 120 13 343 757 WWTR1-AS1,WWTR1
SE_02_085700045 chr3:149527342-149659903 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 45 36 3496 120 13 343 758 WWTR1-AS1,WWTR1
SE_02_090400193 chr3:149527389-149659989 Sample_02_0904 Heart left ventricle_DCM_LV1028 193 43 3500 120 13 343 768 WWTR1-AS1,WWTR1
SE_02_095000009 chr3:149527446-149661265 Sample_02_0950 Umbilical vein HUVEC_WT 9 118 3531 125 13 346 891 WWTR1-AS1,WWTR1,COMMD2,TM4SF4,TM4SF1
SE_02_141000014 chr3:149527454-149670945 Sample_02_1410 Brain GSC6 14 43 3870 178 14 362 974 WWTR1-AS1,WWTR1
SE_02_125600017 chr3:149527479-149660276 Sample_02_1256 Pancreatic duct pancreatic ductal epithelium cell 17 37 3505 121 13 343 800 WWTR1-AS1,WWTR1
SE_02_090900073 chr3:149527595-149661073 Sample_02_0909 Heart left ventricle_DCM_LV1264 73 52 3526 124 13 346 853 WWTR1-AS1,WWTR1
SE_01_011000084 chr3:149527682-149661311 Sample_01_0110 Aorta thoracic aorta_37y 84 74 3530 124 13 346 891 WWTR1-AS1,WWTR1
SE_02_044500135 chr3:149527767-149671425 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 135 75 3874 178 14 353 953 WWTR1-AS1,WWTR1
SE_02_044800009 chr3:149527776-149662693 Sample_02_0448 Bone MNNG 9 75 3574 128 13 343 895 WWTR1-AS1,WWTR1
SE_02_143600109 chr3:149527778-149659700 Sample_02_1436 Liver LSEC-Ctrl 109 46 3478 119 13 334 704 WWTR1-AS1,WWTR1
SE_02_152200004 chr3:149527798-149663017 Sample_02_1522 Skin A375 RTKi 4 31 3582 128 13 343 894 WWTR1-AS1,WWTR1
SE_02_056900087 chr3:149527802-149661226 Sample_02_0569 Periodontal ligament mesenchymal stem cell 87 72 3520 124 13 337 857 WWTR1-AS1,WWTR1
SE_02_091500062 chr3:149527808-149660295 Sample_02_0915 Heart left ventricle_DCM_LV1371 62 57 3496 121 13 334 778 WWTR1-AS1,WWTR1
SE_02_144500040 chr3:149527810-149661098 Sample_02_1445 Adipose SW872_TAZ4SA 40 43 3519 124 13 337 839 WWTR1-AS1,WWTR1
SE_02_105000017 chr3:149527813-149662636 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 17 76 3572 128 13 342 894 WWTR1-AS1,WWTR1
SE_02_092300102 chr3:149527823-149659978 Sample_02_0923 Heart fetal heart_PCW10_12522 102 43 3486 119 13 334 737 WWTR1-AS1,WWTR1
SE_02_090500223 chr3:149527848-149659506 Sample_02_0905 Heart left ventricle_DCM_LV1033 223 31 3474 118 13 334 661 WWTR1-AS1,WWTR1
SE_02_084000002 chr3:149527873-149660599 Sample_02_0840 Embryo hNPCs_R1159Q/+ 2 44 3504 123 13 333 795 WWTR1-AS1,WWTR1
SE_02_091300157 chr3:149527884-149660321 Sample_02_0913 Heart left ventricle_DCM_LV1304 157 63 3495 121 13 333 767 WWTR1-AS1,WWTR1
SE_02_059400013 chr3:149527990-149671325 Sample_02_0594 iPSC-derived neural progenitors 13 33 3867 178 14 350 922 WWTR1-AS1,WWTR1
SE_02_131100074 chr3:149528006-149661079 Sample_02_1311 Bone marrow HDMSCs 74 36 3516 124 13 334 802 WWTR1-AS1,WWTR1
SE_02_092200101 chr3:149528036-149659979 Sample_02_0922 Heart fetal heart_PCW10_12434 101 39 3481 119 13 331 711 WWTR1-AS1,WWTR1
SE_02_145200049 chr3:149528041-149659165 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 49 26 3456 117 13 329 602 WWTR1-AS1,WWTR1
SE_02_105900044 chr3:149528112-149662753 Sample_02_1059 Bone A673_WT 44 38 3568 128 13 340 857 WWTR1-AS1,WWTR1
SE_02_147300045 chr3:149528112-149662753 Sample_02_1473 Bone A-673 45 38 3568 128 13 340 857 WWTR1-AS1,WWTR1
SE_02_151700015 chr3:149528148-149661940 Sample_02_1517 Mammary gland non-transformed human mammary epithelial cell 15 51 3544 128 13 335 856 WWTR1-AS1,WWTR1
SE_02_076200201 chr3:149528162-149663337 Sample_02_0762 Podocyte podocyte_CTL 201 35 3587 129 13 340 856 WWTR1-AS1,WWTR1
SE_02_143300065 chr3:149528205-149662667 Sample_02_1433 Bone A673 STAG2 null 65 64 3563 128 13 339 856 WWTR1-AS1,WWTR1
SE_02_138200026 chr3:149528351-149661320 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 26 80 3513 124 13 334 834 WWTR1-AS1,WWTR1
SE_02_143700132 chr3:149528359-149659319 Sample_02_1437 Liver LSEC-TNF 132 46 3455 117 13 331 607 WWTR1-AS1,WWTR1
SE_02_076800035 chr3:149528365-149661531 Sample_02_0768 Ovary SKOV3 35 95 3522 126 13 335 851 WWTR1-AS1,WWTR1
SE_02_078900080 chr3:149528404-149659681 Sample_02_0789 Brain 3752 80 65 3464 119 13 331 662 WWTR1-AS1,WWTR1
SE_02_152100001 chr3:149528421-149662916 Sample_02_1521 Skin A375 DMSO 1 35 3568 128 13 340 856 WWTR1-AS1,WWTR1
SE_02_143800108 chr3:149528498-149659273 Sample_02_1438 Liver LSEC 108 42 3454 117 13 331 606 WWTR1-AS1,WWTR1
SE_02_142800116 chr3:149528924-149659557 Sample_02_1428 Shoulder fibroblast_316 116 38 3449 118 13 331 641 WWTR1-AS1,WWTR1
SE_02_053300100 chr3:149531025-149661084 Sample_02_0533 Blood vessel Circle of Willis_54y 100 48 3441 123 13 334 798 WWTR1-AS1,WWTR1
SE_02_097200015 chr3:149531218-149662901 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 15 58 3493 126 13 340 856 WWTR1-AS1,WWTR1
SE_02_085600008 chr3:149532041-149659643 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 8 39 3369 116 13 329 655 WWTR1-AS1,WWTR1
SE_02_145100029 chr3:149532654-149659120 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 29 32 3338 114 12 323 595 WWTR1-AS1,WWTR1
SE_02_144700015 chr3:149532662-149659639 Sample_02_1447 Adipose SW872_CAMTA1 15 33 3352 116 12 325 654 WWTR1-AS1,WWTR1
SE_02_148200092 chr3:149536643-149659646 Sample_02_1482 Bone POE 92 36 3226 113 9 317 656 WWTR1-AS1,WWTR1
SE_02_091000423 chr3:149570805-149659884 Sample_02_0910 Heart left ventricle_DCM_LV1275 423 29 2372 84 6 263 617 WWTR1-AS1,WWTR1
SE_02_113800031 chr3:149571427-149660102 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 31 20 2360 84 6 263 648 WWTR1-AS1,WWTR1
SE_02_089100477 chr3:149571478-149660166 Sample_02_0891 Heart left ventricle_LV1202 477 26 2362 85 6 263 652 WWTR1-AS1,WWTR1
SE_02_117400078 chr3:149571486-149659401 Sample_02_1174 Brain GBM02 78 37 2340 83 6 263 536 WWTR1-AS1,WWTR1
SE_02_144800011 chr3:149571518-149659390 Sample_02_1448 Adipose SW872_YAP5SA 11 25 2340 83 6 263 532 WWTR1-AS1,WWTR1
SE_02_090300235 chr3:149571653-149659607 Sample_02_0903 Heart left ventricle_DCM_LV1009 235 38 2339 84 6 262 572 WWTR1-AS1,WWTR1
SE_02_090100290 chr3:149572021-149659391 Sample_02_0901 Heart left ventricle_LV1471 290 44 2325 83 6 262 532 WWTR1-AS1,WWTR1
SE_02_093800042 chr3:149572059-149659365 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 42 37 2325 83 6 262 529 WWTR1-AS1,WWTR1
SE_02_088800330 chr3:149572271-149659911 Sample_02_0888 Heart left ventricle_LV1160 330 30 2333 82 6 262 620 WWTR1-AS1,WWTR1
SE_02_144900111 chr3:149573127-149659396 Sample_02_1449 Adipose SW872_YAP_TFE3 111 24 2288 81 6 249 481 WWTR1-AS1,WWTR1
SE_02_080800439 chr3:149602379-149660370 Sample_02_0808 Ovary RMG1_ARID1A KO 439 38 1544 72 4 195 612 WWTR1-AS1,WWTR1
SE_02_145400369 chr3:149603934-149659220 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 369 14 1461 68 4 189 459 WWTR1-AS1,WWTR1
SE_02_088901233 chr3:149615197-149660176 Sample_02_0889 Heart left ventricle_LV1183 1233 13 1195 67 4 156 587 WWTR1-AS1,WWTR1
SE_02_127300712 chr3:149615680-149661384 Sample_02_1273 Cervix HeLa 712 11 1218 70 4 159 697 WWTR1-AS1,WWTR1
SE_02_044100523 chr3:149616155-149661131 Sample_02_0441 Bone M112 523 11 1199 69 4 147 659 WWTR1-AS1,WWTR1
SE_02_141900096 chr3:149618770-149659542 Sample_02_1419 Brain hNSC 96 8 1080 61 4 144 494 WWTR1-AS1,WWTR1
SE_02_093600449 chr3:149620149-149659369 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 449 11 1028 60 4 140 464 WWTR1-AS1,WWTR1
SE_02_067200681 chr3:149625553-149659352 Sample_02_0672 Endometrium endometrium cancer_DSG 681 11 890 59 3 129 464 WWTR1-AS1,WWTR1
SE_02_119900700 chr3:149628834-149659996 Sample_02_1199 Brain GBM35 700 9 817 59 2 114 563 WWTR1-AS1,WWTR1
SE_02_069800077 chr3:149629449-149660237 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 77 4 810 58 1 112 593 WWTR1-AS1,WWTR1
SE_02_147400397 chr3:149636694-149659517 Sample_02_1474 Bone CHLA-10 397 4 611 48 0 97 490 WWTR1-AS1,WWTR1
SE_02_080200216 chr3:149637280-149659657 Sample_02_0802 Brain 3094 216 5 598 49 0 97 517 WWTR1-AS1,WWTR1
SE_02_055500219 chr3:149637366-149671288 Sample_02_0555 Other HAP1_WT 219 8 989 108 1 116 769 WWTR1-AS1,WWTR1
SE_02_147600393 chr3:149637532-149662818 Sample_02_1476 Bone EW-1 393 8 690 57 0 106 712 WWTR1-AS1,WWTR1
SE_02_108400096 chr3:149637540-149671553 Sample_02_1084 Blood KBM7-derived near haploid cells 96 13 990 108 1 116 769 WWTR1-AS1,WWTR1
SE_02_128001397 chr3:149637696-149662713 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1397 6 685 57 0 106 712 WWTR1-AS1,WWTR1
SE_02_090601213 chr3:149638038-149659927 Sample_02_0906 Heart left ventricle_DCM_LV1072 1213 6 581 48 0 97 555 WWTR1-AS1,WWTR1
SE_02_117700474 chr3:149638311-149661292 Sample_02_1177 Brain GBM05 474 9 613 52 0 100 687 WWTR1-AS1,WWTR1
SE_02_076000608 chr3:149638816-149661153 Sample_02_0760 Ovary BIN-67_SMARCA4 608 7 596 52 0 89 662 WWTR1-AS1,WWTR1
SE_02_061600124 chr3:149645583-149663038 Sample_02_0616 Liposarcoma liposarcoma cells_LP6 124 4 447 36 0 78 712 WWTR1-AS1,WWTR1
SE_02_113901239 chr3:149645657-149659619 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1239 4 339 27 0 69 510 WWTR1-AS1,WWTR1
SE_02_071901016 chr3:149645941-149659705 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 1016 4 330 25 0 69 521 WWTR1-AS1,WWTR1
SE_02_132000290 chr3:149646405-149662695 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 290 4 411 34 0 78 712 WWTR1-AS1,WWTR1
SE_02_058400733 chr3:149648759-149659311 Sample_02_0584 Lung H1299 WT 733 4 256 19 0 69 463 WWTR1-AS1,WWTR1
SE_02_076601221 chr3:149648787-149660550 Sample_02_0766 Ovary PEO1 1221 4 293 24 0 70 625 WWTR1-AS1,WWTR1
SE_02_126701443 chr3:149652304-149659657 Sample_02_1267 Bone Im-GCT-4072_G34W 1443 2 165 16 0 68 517 WWTR1-AS1,WWTR1
SE_02_120000757 chr3:149653494-149659934 Sample_02_1200 Brain GBM36 757 3 144 15 0 68 555 WWTR1-AS1,WWTR1
SE_02_132100377 chr3:149653620-149662647 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 377 4 229 24 0 76 712 WWTR1-AS1,WWTR1
SE_02_116700873 chr3:149654667-149660387 Sample_02_1167 Biliary H69_TGF Vehicle_1 873 3 144 14 0 68 616 WWTR1-AS1,WWTR1
SE_02_074800419 chr3:149654682-149660440 Sample_02_0748 Mammary gland HCC1599_WO 419 2 145 14 0 68 617 WWTR1-AS1,WWTR1
SE_02_119300988 chr3:149654707-149659597 Sample_02_1193 Brain GBM27 988 2 117 12 0 67 501 WWTR1-AS1,WWTR1
SE_00_005300531 chr3:149654746-149679216 Sample_00_0053 Embryo trophoblast cell originated from H1 531 10 764 135 1 86 769 WWTR1-AS1,WWTR1
SE_02_116801030 chr3:149655047-149661196 Sample_02_1168 Biliary H69_TGF Vehicle_2 1030 3 153 16 0 70 674 WWTR1-AS1,WWTR1
SE_02_074900524 chr3:149655154-149660529 Sample_02_0749 Mammary gland HCC1599_GSI 524 4 135 14 0 68 625 WWTR1-AS1,WWTR1
SE_02_108000506 chr3:149655216-149661315 Sample_02_1080 Muscle JR1 shCtrl 506 3 153 16 0 70 690 WWTR1-AS1,WWTR1
SE_02_097300386 chr3:149655373-149659843 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 386 1 107 11 0 67 545 WWTR1-AS1,WWTR1
SE_02_158401279 chr3:149655728-149663132 Sample_02_1584 Brain U87 GBM_Mock 1279 3 200 16 0 73 712 WWTR1-AS1,WWTR1
SE_02_049101171 chr3:149655811-149661231 Sample_02_0491 Pharyng Detroit 562-Control 1171 1 135 12 0 67 677 WWTR1-AS1,WWTR1
SE_02_049201176 chr3:149655899-149661219 Sample_02_0492 Pharyng Detroit 562_LPS 1176 3 130 11 0 67 674 WWTR1-AS1,WWTR1
SE_02_121000411 chr3:149655999-149659749 Sample_02_1210 Brain GBM17 411 1 86 6 0 64 527 WWTR1-AS1,WWTR1
SE_02_101701886 chr3:149656517-149677269 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1886 3 639 118 1 79 769 WWTR1-AS1,WWTR1

Genomic distribution of SEs associated with WWTR1-AS1

The strength of the tissue affected by the gene


Expression of WWTR1-AS1