Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000003147 |
| Gene: | ICA1 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr7:8113184-8262687 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_122400038 | chr7:7901876-8134747 |
Sample_02_1224 | Bone marrow | normal plasma cell | 38 | 122 | 7219 | 402 | 25 | 652 | 1131 | ICA1,GLCCI1,LOC100505921 |
| SE_02_023400040 | chr7:8034511-8154761 |
Sample_02_0234 | Tonsil | Th17 | 40 | 26 | 3948 | 153 | 15 | 405 | 802 | ICA1,GLCCI1 |
| SE_02_104500104 | chr7:8074471-8135329 |
Sample_02_1045 | Peripheral blood | CD4+ CD7- cells_CTCL992 | 104 | 25 | 2070 | 70 | 10 | 262 | 546 | ICA1,GLCCI1,LOC100505921 |
| SE_02_104901595 | chr7:8086255-8152953 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 1595 | 28 | 2290 | 85 | 13 | 313 | 615 | ICA1,GLCCI1 |
| SE_02_104701924 | chr7:8086302-8153065 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 1924 | 21 | 2296 | 85 | 13 | 312 | 606 | ICA1,GLCCI1 |
| SE_00_004400369 | chr7:8104824-8150769 |
Sample_00_0044 | Cord blood | T-cell | 369 | 7 | 1558 | 51 | 9 | 205 | 396 | ICA1,GLCCI1 |
| SE_02_023300064 | chr7:8105109-8152538 |
Sample_02_0233 | Tonsil | Th1 | 64 | 8 | 1605 | 55 | 9 | 230 | 396 | ICA1,GLCCI1 |
| SE_02_034800412 | chr7:8111673-8155032 |
Sample_02_0348 | Peripheral blood | CUTLL1_wild-type | 412 | 9 | 1414 | 51 | 8 | 231 | 396 | ICA1 |
| SE_02_034900338 | chr7:8111776-8154945 |
Sample_02_0349 | Peripheral blood | CUTLL1_dimer-mutant | 338 | 8 | 1407 | 51 | 8 | 231 | 396 | ICA1 |
| SE_02_078200066 | chr7:8112779-8150936 |
Sample_02_0782 | Blood | MEC1 | 66 | 5 | 1257 | 47 | 7 | 189 | 396 | ICA1 |
| SE_02_078300226 | chr7:8113099-8150841 |
Sample_02_0783 | Blood | MEC2 | 226 | 7 | 1243 | 46 | 7 | 188 | 371 | ICA1 |
| SE_02_078400248 | chr7:8113251-8150614 |
Sample_02_0784 | Blood | OSU-CLL | 248 | 7 | 1234 | 46 | 7 | 187 | 356 | ICA1 |
| SE_02_104400293 | chr7:8113352-8141373 |
Sample_02_1044 | Peripheral blood | CD4+ cells_CTCL409 | 293 | 12 | 911 | 36 | 5 | 134 | 258 | ICA1 |
| SE_01_004400210 | chr7:8113600-8156883 |
Sample_01_0044 | Haematopoietic and lymphoid tissue | Loucy | 210 | 5 | 1407 | 51 | 7 | 235 | 308 | ICA1 |
| SE_02_142900603 | chr7:8113867-8150157 |
Sample_02_1429 | Blood | GM12878_WT | 603 | 8 | 1203 | 46 | 7 | 186 | 263 | ICA1 |
| SE_02_082601637 | chr7:8114025-8148186 |
Sample_02_0826 | Stomach | gastric tumor | 1637 | 14 | 1126 | 42 | 7 | 169 | 239 | ICA1 |
| SE_02_104100200 | chr7:8114436-8148061 |
Sample_02_1041 | Peripheral blood | CD4+ cells_CTCL1135 | 200 | 11 | 1108 | 40 | 7 | 169 | 210 | ICA1 |
| SE_02_104200459 | chr7:8115469-8143902 |
Sample_02_1042 | Peripheral blood | CD4+ cells_CTCL1137 | 459 | 16 | 939 | 32 | 5 | 126 | 191 | ICA1 |
| SE_02_002600493 | chr7:8115627-8149661 |
Sample_02_0026 | Blood | CD4donorE | 493 | 9 | 1134 | 40 | 7 | 169 | 210 | ICA1 |
| SE_02_023100609 | chr7:8124906-8144208 |
Sample_02_0231 | Tonsil | ILC1 | 609 | 4 | 612 | 26 | 3 | 84 | 210 | ICA1,GLCCI1 |
| SE_02_139300770 | chr7:8124927-8144044 |
Sample_02_1393 | Lymph node | anaplastic large cell lymphoma cells_ALK+#54 | 770 | 6 | 608 | 26 | 3 | 83 | 197 | ICA1 |
| SE_02_059200425 | chr7:8125465-8143979 |
Sample_02_0592 | PBMCs | adult CD4+CD25hiCD127lo regulatory T cells | 425 | 8 | 588 | 26 | 3 | 83 | 196 | ICA1 |
| SE_02_104000479 | chr7:8125604-8152212 |
Sample_02_1040 | Peripheral blood | CD4+ cells_CTCL1126 | 479 | 24 | 869 | 37 | 5 | 156 | 210 | ICA1 |
| SE_02_066300063 | chr7:8140930-8217553 |
Sample_02_0663 | Thyroid | TT | 63 | 22 | 2488 | 92 | 4 | 305 | 185 | ICA1,LOC100505938 |
| SE_02_120501262 | chr7:8145069-8217428 |
Sample_02_1205 | Brain | NB3 | 1262 | 32 | 2340 | 90 | 4 | 290 | 97 | ICA1,LOC100505938 |
| SE_02_118701013 | chr7:8146728-8191189 |
Sample_02_1187 | Brain | GBM16 | 1013 | 15 | 1388 | 38 | 2 | 170 | 97 | ICA1 |
| SE_02_096900708 | chr7:8146831-8191069 |
Sample_02_0969 | Brain | H3.3K27M_PL637 | 708 | 16 | 1379 | 38 | 2 | 170 | 97 | ICA1 |
| SE_02_129400129 | chr7:8147358-8184692 |
Sample_02_1294 | Lung | JHU-LX44-SCLC PDX | 129 | 9 | 1173 | 37 | 2 | 95 | 97 | ICA1 |
| SE_02_023400878 | chr7:8167785-8191340 |
Sample_02_0234 | Tonsil | Th17 | 878 | 6 | 710 | 16 | 0 | 73 | 0 | ICA1,GLCCI1 |
| SE_02_031800078 | chr7:8172307-8240369 |
Sample_02_0318 | Neuroblastoma | NB69 | 78 | 6 | 2230 | 123 | 6 | 253 | 273 | ICA1 |
| SE_02_029700015 | chr7:8172790-8298117 |
Sample_02_0297 | Neuroblastoma | CLB-CAR | 15 | 17 | 4180 | 232 | 10 | 341 | 539 | ICA1 |
| SE_02_061200540 | chr7:8172928-8217437 |
Sample_02_0612 | Liposarcoma | DDLPS_T2 | 540 | 21 | 1467 | 58 | 1 | 181 | 0 | ICA1,LOC100505938 |
| SE_01_011100009 | chr7:8173059-8296749 |
Sample_01_0111 | Brain | SK-N-SH | 9 | 45 | 4136 | 231 | 10 | 341 | 539 | LOC100505938,ICA1 |
| SE_02_078200297 | chr7:8173659-8191191 |
Sample_02_0782 | Blood | MEC1 | 297 | 4 | 551 | 12 | 0 | 64 | 0 | ICA1 |
| SE_02_078300835 | chr7:8173766-8191251 |
Sample_02_0783 | Blood | MEC2 | 835 | 4 | 553 | 12 | 0 | 64 | 0 | ICA1 |
| SE_02_078400724 | chr7:8173781-8202265 |
Sample_02_0784 | Blood | OSU-CLL | 724 | 4 | 930 | 40 | 1 | 72 | 0 | ICA1 |
| SE_02_073000650 | chr7:8173949-8190558 |
Sample_02_0730 | Lymphoma | J4_Mantle cell lymphoma tissue_DMSO | 650 | 5 | 523 | 12 | 0 | 50 | 0 | ICA1,LOC100505921 |
| SE_02_031200427 | chr7:8174368-8240328 |
Sample_02_0312 | Neuroblastoma | SK-N-BE_2-C | 427 | 5 | 2163 | 122 | 6 | 249 | 273 | ICA1 |
| SE_02_075001019 | chr7:8174439-8186466 |
Sample_02_0750 | Lymphoma | Rec-1_GSI | 1019 | 6 | 390 | 11 | 0 | 10 | 0 | ICA1 |
| SE_02_155400766 | chr7:8186271-8217517 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 766 | 11 | 1035 | 47 | 1 | 169 | 0 | ICA1,LOC100505938 |
| SE_02_040800117 | chr7:8188836-8217677 |
Sample_02_0408 | Kidney | G401_Dox | 117 | 2 | 966 | 46 | 1 | 170 | 0 | ICA1 |
| SE_02_040900109 | chr7:8189137-8217587 |
Sample_02_0409 | Kidney | G401_NoDox | 109 | 3 | 957 | 46 | 1 | 168 | 0 | ICA1 |
| SE_02_046500631 | chr7:8189639-8217057 |
Sample_02_0465 | Adipose | subcutaneous adipocytes | 631 | 19 | 933 | 46 | 1 | 161 | 0 | ICA1,LOC100505938 |
| SE_02_030600091 | chr7:8193148-8240326 |
Sample_02_0306 | Autonomic ganglia | SH-SY5Y | 91 | 3 | 1583 | 109 | 6 | 182 | 273 | ICA1 |
| SE_02_029600121 | chr7:8203252-8240534 |
Sample_02_0296 | Neuroblastoma | CLB-BER-Lud | 121 | 2 | 1236 | 79 | 5 | 169 | 273 | ICA1 |
| SE_02_034100021 | chr7:8203523-8297044 |
Sample_02_0341 | Autonomic ganglia | SH-SY5Y_untreat | 21 | 7 | 3149 | 185 | 9 | 258 | 539 | ICA1 |
| SE_02_047300030 | chr7:8203905-8296799 |
Sample_02_0473 | Brain | Kelly JQ1 treated TAE resistant | 30 | 47 | 3131 | 184 | 9 | 258 | 539 | LOC100505938,ICA1 |
| SE_02_031400088 | chr7:8204225-8297226 |
Sample_02_0314 | Neuroblastoma | SK-N-FI | 88 | 8 | 3121 | 185 | 9 | 258 | 539 | ICA1 |
| SE_02_030400084 | chr7:8204441-8239431 |
Sample_02_0304 | Neuroblastoma | N206 | 84 | 2 | 1138 | 73 | 5 | 167 | 273 | ICA1 |
| SE_02_106400100 | chr7:8204462-8237300 |
Sample_02_1064 | Brain | CLB-GA-Dinaciclib_8h | 100 | 10 | 1055 | 70 | 5 | 166 | 273 | ICA1,LOC100505938 |
| SE_02_029900249 | chr7:8204481-8238118 |
Sample_02_0299 | Neuroblastoma | CLB-MA | 249 | 4 | 1092 | 71 | 5 | 166 | 273 | ICA1 |
| SE_02_025100199 | chr7:8204548-8238625 |
Sample_02_0251 | Autonomic ganglia | SH-SY5Y-MYCN-OFF | 199 | 6 | 1104 | 72 | 5 | 166 | 273 | ICA1 |
| SE_02_106300064 | chr7:8204616-8240039 |
Sample_02_1063 | Brain | CLB-GA-control | 64 | 12 | 1156 | 74 | 5 | 163 | 273 | ICA1,LOC100505938 |
| SE_02_030000002 | chr7:8204655-8404684 |
Sample_02_0300 | Neuroblastoma | CLB-PE | 2 | 18 | 6700 | 203 | 16 | 558 | 982 | ICA1,NXPH1 |
| SE_02_029800183 | chr7:8204722-8239389 |
Sample_02_0298 | Neuroblastoma | CLB-GA | 183 | 6 | 1130 | 73 | 5 | 163 | 273 | ICA1 |
| SE_02_006100045 | chr7:8205141-8215291 |
Sample_02_0061 | Adipose | hMADS-3_white | 45 | 8 | 336 | 9 | 0 | 82 | 0 | ICA1,GLCCI1 |
| SE_02_123500204 | chr7:8205274-8240198 |
Sample_02_1235 | Brain | Neuroblastoma PDX tumour cells | 204 | 26 | 1141 | 74 | 5 | 163 | 273 | ICA1,LOC100505938 |
| SE_02_150000097 | chr7:8205308-8240243 |
Sample_02_1500 | Brain | KELLY_untreat | 97 | 13 | 1140 | 74 | 5 | 162 | 273 | ICA1,LOC100505938 |
| SE_02_110400707 | chr7:8205362-8240216 |
Sample_02_1104 | Brain | NB-69 | 707 | 19 | 1137 | 74 | 5 | 162 | 273 | ICA1,LOC100505938 |
| SE_02_006200063 | chr7:8205731-8214771 |
Sample_02_0062 | Adipose | hMADS-3_brite | 63 | 3 | 302 | 9 | 0 | 77 | 0 | ICA1 |
| SE_02_047100130 | chr7:8206104-8240101 |
Sample_02_0471 | Brain | Kelly DMSO | 130 | 15 | 1108 | 74 | 5 | 161 | 273 | ICA1,LOC100505938 |
| SE_02_030300122 | chr7:8208309-8240493 |
Sample_02_0303 | Neuroblastoma | LAN1 | 122 | 6 | 1045 | 69 | 5 | 137 | 273 | ICA1 |
| SE_02_031900026 | chr7:8212590-8297383 |
Sample_02_0319 | Neuroblastoma | NB-EBc1 | 26 | 13 | 2844 | 175 | 9 | 211 | 539 | ICA1 |
| SE_02_007500059 | chr7:8213824-8238339 |
Sample_02_0075 | Autonomic ganglia | kelly_DMSO_3h | 59 | 6 | 788 | 62 | 5 | 107 | 273 | ICA1 |
| SE_02_031500129 | chr7:8213963-8238735 |
Sample_02_0315 | Neuroblastoma | TR14 | 129 | 4 | 796 | 63 | 5 | 107 | 273 | ICA1 |
| SE_02_031300528 | chr7:8214180-8240526 |
Sample_02_0313 | Neuroblastoma | SK-N-DZ | 528 | 5 | 856 | 66 | 5 | 102 | 273 | ICA1 |
| SE_02_022000165 | chr7:8216074-8237895 |
Sample_02_0220 | Brain | BE2C_1 | 165 | 5 | 690 | 60 | 5 | 76 | 273 | ICA1 |
| SE_02_034000241 | chr7:8216388-8239170 |
Sample_02_0340 | Brain | BE2C_2 | 241 | 4 | 743 | 63 | 5 | 75 | 273 | ICA1 |
| SE_02_042100362 | chr7:8216640-8238492 |
Sample_02_0421 | Brain | BE2C_3 | 362 | 7 | 701 | 61 | 5 | 73 | 273 | ICA1 |
| SE_02_030800006 | chr7:8219921-8297433 |
Sample_02_0308 | Neuroblastoma | SJNB1 | 6 | 7 | 2624 | 174 | 9 | 144 | 484 | ICA1 |
| SE_02_033900317 | chr7:8220902-8238011 |
Sample_02_0339 | Neuroblastoma | NGP | 317 | 4 | 567 | 60 | 5 | 54 | 218 | ICA1 |
| SE_04_000101221 | chr7:8227133-8240333 |
Sample_04_0001 | Blood | heat shocked K562 | 1221 | 3 | 442 | 35 | 5 | 32 | 155 | ICA1,LOC100505938 |
| SE_02_031800054 | chr7:8253350-8297615 |
Sample_02_0318 | Neuroblastoma | NB69 | 54 | 4 | 1525 | 76 | 4 | 74 | 266 | ICA1 |
| SE_02_068700912 | chr7:8253674-8264934 |
Sample_02_0687 | Lung | NCI-H146_no infection | 912 | 4 | 375 | 29 | 0 | 51 | 266 | LOC100505938,ICA1 |
| SE_02_030300042 | chr7:8253713-8297805 |
Sample_02_0303 | Neuroblastoma | LAN1 | 42 | 6 | 1520 | 75 | 4 | 74 | 266 | ICA1 |
| SE_02_031500266 | chr7:8253719-8265249 |
Sample_02_0315 | Neuroblastoma | TR14 | 266 | 2 | 381 | 29 | 0 | 51 | 266 | ICA1 |
| SE_02_071101030 | chr7:8254065-8263224 |
Sample_02_0711 | Pancreas | hN35_organoid | 1030 | 3 | 306 | 24 | 0 | 50 | 266 | LOC100505938,ICA1 |
| SE_02_123500270 | chr7:8254091-8265116 |
Sample_02_1235 | Brain | Neuroblastoma PDX tumour cells | 270 | 3 | 366 | 29 | 0 | 51 | 266 | LOC100505938,ICA1 |
| SE_02_071000818 | chr7:8254180-8263108 |
Sample_02_0710 | Pancreas | hN34_organoid | 818 | 4 | 301 | 24 | 0 | 50 | 266 | LOC100505938,ICA1 |
| SE_02_137100357 | chr7:8254522-8263069 |
Sample_02_1371 | Pancreas | Patu899S-untreated | 357 | 3 | 289 | 24 | 0 | 44 | 266 | LOC100505938,ICA1 |
| SE_02_110400307 | chr7:8256579-8297226 |
Sample_02_1104 | Brain | NB-69 | 307 | 13 | 1409 | 72 | 4 | 68 | 266 | LOC100505938,ICA1 |
| SE_02_030400046 | chr7:8257009-8297482 |
Sample_02_0304 | Neuroblastoma | N206 | 46 | 4 | 1407 | 71 | 4 | 68 | 266 | ICA1 |
| SE_02_030600102 | chr7:8257463-8297488 |
Sample_02_0306 | Autonomic ganglia | SH-SY5Y | 102 | 4 | 1392 | 71 | 4 | 67 | 266 | ICA1 |
| SE_02_025300277 | chr7:8257547-8264585 |
Sample_02_0253 | Brain | BE2C_DMSO | 277 | 1 | 245 | 24 | 0 | 44 | 266 | ICA1 |
| SE_02_029600389 | chr7:8257562-8268046 |
Sample_02_0296 | Neuroblastoma | CLB-BER-Lud | 389 | 1 | 361 | 27 | 0 | 44 | 266 | ICA1 |
| SE_02_025100158 | chr7:8257607-8264959 |
Sample_02_0251 | Autonomic ganglia | SH-SY5Y-MYCN-OFF | 158 | 1 | 256 | 25 | 0 | 44 | 266 | ICA1 |
| SE_02_007500019 | chr7:8257631-8297153 |
Sample_02_0075 | Autonomic ganglia | kelly_DMSO_3h | 19 | 4 | 1380 | 70 | 4 | 67 | 266 | ICA1 |
| SE_02_042100265 | chr7:8257700-8264606 |
Sample_02_0421 | Brain | BE2C_3 | 265 | 1 | 244 | 24 | 0 | 44 | 266 | ICA1 |
| SE_02_150000040 | chr7:8257761-8297211 |
Sample_02_1500 | Brain | KELLY_untreat | 40 | 9 | 1376 | 70 | 4 | 67 | 266 | LOC100505938,ICA1 |
| SE_02_029800098 | chr7:8257788-8296376 |
Sample_02_0298 | Neuroblastoma | CLB-GA | 98 | 4 | 1352 | 70 | 4 | 67 | 266 | ICA1 |
| SE_02_054100153 | chr7:8257849-8264618 |
Sample_02_0541 | Brain | Kelly_NaiveJQ1 | 153 | 1 | 239 | 24 | 0 | 44 | 266 | LOC100505938,ICA1 |
| SE_02_047100079 | chr7:8257922-8296861 |
Sample_02_0471 | Brain | Kelly DMSO | 79 | 15 | 1363 | 70 | 4 | 67 | 266 | LOC100505938,ICA1 |
| SE_02_106400271 | chr7:8257953-8265171 |
Sample_02_1064 | Brain | CLB-GA-Dinaciclib_8h | 271 | 3 | 249 | 25 | 0 | 44 | 266 | LOC100505938,ICA1 |
| SE_02_150800062 | chr7:8258040-8296109 |
Sample_02_1508 | Brain | NGPz_untreat | 62 | 11 | 1329 | 70 | 4 | 67 | 266 | LOC100505938,ICA1 |
| SE_02_022000207 | chr7:8258185-8264194 |
Sample_02_0220 | Brain | BE2C_1 | 207 | 1 | 205 | 23 | 0 | 43 | 266 | ICA1 |
| SE_02_029900526 | chr7:8258219-8263963 |
Sample_02_0299 | Neuroblastoma | CLB-MA | 526 | 1 | 196 | 23 | 0 | 43 | 266 | ICA1 |
| SE_02_034000315 | chr7:8258250-8264407 |
Sample_02_0340 | Brain | BE2C_2 | 315 | 1 | 211 | 23 | 0 | 44 | 266 | ICA1 |
| SE_02_033900277 | chr7:8258298-8263806 |
Sample_02_0339 | Neuroblastoma | NGP | 277 | 1 | 188 | 21 | 0 | 43 | 266 | ICA1 |
| SE_02_106300284 | chr7:8258572-8264696 |
Sample_02_1063 | Brain | CLB-GA-control | 284 | 1 | 217 | 24 | 0 | 44 | 266 | LOC100505938,ICA1 |
| SE_02_088400954 | chr7:8259172-8263446 |
Sample_02_0884 | Colon | LoVo | 954 | 2 | 155 | 15 | 0 | 43 | 266 | LOC100505938,ICA1 |
| SE_02_068800137 | chr7:8260294-8265689 |
Sample_02_0688 | Lung | NCI-H211_no infection | 137 | 2 | 184 | 18 | 0 | 42 | 266 | LOC100505938,ICA1 |
Genomic distribution of SEs associated with ICA1