Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000205488
Gene: CALML3-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr10:5510036-5526246 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000100051 chr10:5442519-5524156 Sample_04_0001 Blood heat shocked K562 51 10 2711 224 4 139 1244 CALML5,CALML3-AS1,NET1,CALML3,TUBAL3
SE_02_052600187 chr10:5485060-5519014 Sample_02_0526 Mammary gland MCF7 TRPS1 KO 187 15 1144 83 4 43 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_052700155 chr10:5485931-5519158 Sample_02_0527 Mammary gland MCF7_WT 155 17 1107 80 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_157500114 chr10:5485948-5519970 Sample_02_1575 Mammary gland MCF7_Mock 114 17 1128 80 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_157600090 chr10:5486091-5519685 Sample_02_1576 Mammary gland MCF7_CPI-455 90 14 1118 79 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_157700090 chr10:5486298-5519784 Sample_02_1577 Mammary gland MCF7_DAC 90 10 1110 79 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_01_011300050 chr10:5486686-5519200 Sample_01_0113 Mammary gland MCF-7 50 12 1082 77 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_062300345 chr10:5487535-5520150 Sample_02_0623 Mammary gland TAMR_E2 345 7 1070 74 3 39 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_062400274 chr10:5487798-5520188 Sample_02_0624 Mammary gland TAMR_VEH 274 7 1059 74 3 39 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_077800313 chr10:5487818-5519307 Sample_02_0778 Mammary gland MCF7_FASR 313 7 1038 74 3 39 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_103601742 chr10:5487967-5521781 Sample_02_1036 Mammary gland HCC70_XY018 1742 12 1111 78 3 39 415 CALML5,CALML3-AS1,CALML3,NET1
SE_02_076400381 chr10:5492467-5519293 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 381 11 892 62 3 32 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_066900628 chr10:5492548-5518848 Sample_02_0669 Prostate prostate cancer_DSG 628 13 874 61 3 32 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_098800206 chr10:5509718-5570002 Sample_02_0988 Blood K562_EPZ 206 20 2060 98 7 144 693 CALML3-AS1,CALML3,CALML5
SE_02_155900458 chr10:5515881-5560508 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 458 17 1476 66 3 131 693 CALML3-AS1,CALML3,CALML5
SE_02_155300126 chr10:5516153-5632391 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 126 49 4002 300 19 271 693 CALML3-AS1,CALML3,CALML5,ASB13
SE_02_155400627 chr10:5517061-5560903 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 627 15 1450 65 3 124 654 CALML3-AS1,CALML3,CALML5,NET1
SE_02_052200116 chr10:5518476-5552884 Sample_02_0522 Colon SW620 116 6 1104 52 1 92 598 CALML3-AS1,CALML3,CALML5
SE_02_076600009 chr10:5523319-5633146 Sample_02_0766 Ovary PEO1 9 30 3802 289 19 273 372 CALML3-AS1,CALML3,CALML5,ASB13
SE_02_050800013 chr10:5523852-5623300 Sample_02_0508 Esophagus TT_1 13 39 3470 259 18 255 367 CALML3-AS1,CALML3,CALML5,ASB13
SE_02_051800013 chr10:5523852-5623300 Sample_02_0518 Esophagus TT_Esophagus carcinoma 13 39 3470 259 18 255 367 CALML3-AS1,CALML3,CALML5,ASB13
SE_01_010700130 chr10:5524057-5660510 Sample_01_0107 Esophagus esophagus squamous epithelium 130 34 4755 365 22 326 1213 CALML3-AS1,ASB13,CALML3,CALML5,FAM208B

Genomic distribution of SEs associated with CALML3-AS1

The strength of the tissue affected by the gene


Expression of CALML3-AS1