Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_052700195 chr1:107670049-107702959 32910 195 13 914 34 6 191 113 VAV3
SE_02_052700213 chr1:109134442-109182645 48203 213 16 1284 156 4 83 452 KIAA1324,SCARNA2,C1ORF194,SARS,TMEM167B
SE_02_052700047 chr1:109237510-109278544 41034 47 20 1223 96 24 516 4219 SARS,CELSR2,PSRC1,MYBPHL
SE_02_052700229 chr1:146368897-146401178 32281 229 15 0 95 0 0 0 RNVU1-18,NUDT4P1
SE_02_052700268 chr1:149390145-149442283 52138 268 17 0 32 0 0 0 PPIAL4C
SE_02_052700136 chr1:150560632-150580590 19958 136 6 525 53 4 85 820 ADAMTSL4,MCL1,ADAMTSL4-AS1,ENSA,FALEC,MIR4257
SE_02_052700078 chr1:150961318-150984495 23177 78 13 558 69 4 156 1871 SETDB1,ANXA9,CERS2,PRUNE,FAM63A
SE_02_052700263 chr1:151987207-151999580 12373 263 5 286 32 1 47 346 S100A10,NBPF18P,S100A11
SE_02_052700180 chr1:152033860-152049585 15725 180 4 321 35 0 35 289 S100A11,LOC100131107,TCHHL1,NBPF18P,S100A10
SE_02_052700166 chr1:154998365-155018426 20061 166 14 419 21 2 633 1625 ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1
SE_02_052700226 chr1:155116931-155133874 16943 226 8 428 43 3 136 436 EFNA1,KRTCAP2,TRIM46,SLC50A1,EFNA3,DPM3
SE_02_052700209 chr1:156096904-156130859 33955 209 16 813 71 4 245 674 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_052700283 chr1:156745993-156753041 7048 283 1 177 13 0 68 388 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24
SE_02_052700276 chr1:169506971-169544339 37368 276 15 976 98 18 146 1187 F5,CCDC181,SLC19A2
SE_02_052700125 chr1:181088722-181136181 47459 125 16 1310 95 4 355 458 IER5,LOC101928973,STX6
SE_02_052700188 chr1:186125546-186157114 31568 188 13 836 50 8 143 708 HMCN1,PRG4
SE_02_052700021 chr1:202005578-202135299 129721 21 58 3624 211 10 306 2705 RNPEP,ARL8A,ELF3,GPR37L1,PTPRVP,MIR6740,PTPN7,LGR6,TIMM17A
SE_02_052700253 chr1:234598747-234618920 20173 253 10 562 38 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_052700295 chr1:32744062-32763726 19664 295 7 449 9 0 119 162 KIAA1522,SYNC
SE_02_052700205 chr1:43530245-43553577 23332 205 13 702 44 5 179 404 PTPRF
SE_02_052700088 chr1:51305456-51355581 50125 88 25 1240 106 2 121 1368 TTC39A-AS1,EPS15,TTC39A
SE_02_052700173 chr1:51534829-51572571 37742 173 22 938 100 4 109 27 OSBPL9,EPS15
SE_02_052700186 chr1:85197900-85230772 32872 186 16 809 77 12 105 269 SYDE2,C1ORF52,BCL10,LOC646626
SE_02_052700152 chr1:96057351-96097530 40179 152 15 956 32 4 174 0 LOC102723661,LOC101928241
SE_02_052700187 chr10:115653199-115675405 22206 187 10 651 17 1 33 0 ATRNL1
SE_02_052700239 chr10:119651408-119682787 31379 239 17 1018 104 3 161 720 BAG3,INPP5F
SE_02_052700104 chr10:132389347-132422861 33514 104 17 1252 88 2 130 926 PWWP2B,C10ORF91,LRRC27,INPP5A,C10orf91
SE_02_052700143 chr10:19203582-19248046 44464 143 23 1637 54 6 61 0 MALRD1
SE_02_052700267 chr10:33252428-33316063 63635 267 16 1786 25 8 288 320 NRP1
SE_02_052700054 chr10:52433673-52489711 56038 54 24 1467 41 5 120 187 LINC01468
SE_02_052700155 chr10:5485931-5519158 33227 155 17 1107 80 4 42 408 CALML5,CALML3-AS1,CALML3,NET1
SE_02_052700278 chr10:5539053-5555531 16478 278 7 530 18 1 42 0 CALML3,CALML5,CALML3-AS1,NET1,GDI2
SE_02_052700246 chr10:61897432-61945839 48407 246 19 1260 19 8 496 258 ARID5B
SE_02_052700214 chr10:69426596-69469206 42610 214 14 1234 239 7 0 161 TSPAN15,TACR2
SE_02_052700274 chr10:77844831-77899194 54363 274 24 1527 143 1 118 881 DLG5,DLG5-AS1
SE_02_052700270 chr10:79229132-79267182 38050 270 19 1120 28 2 223 128 ZMIZ1,PPIF
SE_02_052700012 chr10:8045071-8104682 59611 12 16 2005 43 27 446 1693 GATA3-AS1,GATA3,FLJ45983
SE_02_052700049 chr10:8852038-8893072 41034 49 18 1111 1 3 11 0 LOC105755953,FLJ45983,GATA3
SE_02_052700095 chr10:9033992-9083044 49052 95 20 1319 59 21 115 0 LOC105755953,FLJ45983,GATA3
SE_02_052700033 chr10:9174392-9220583 46191 33 20 1253 1 3 133 0 LOC101928272,LINC00709
SE_02_052700132 chr10:93422341-93480386 58045 132 25 1687 204 7 142 309 MYOF,CEP55,FFAR4
SE_02_052700290 chr10_KI270825v1_alt:85029-137951 52922 290 24 0 0 0 0 0 DLG5
SE_02_052700044 chr11:118907341-118933611 26270 44 11 645 55 3 429 649 BCL9L,MIR4492,CXCR5,UPK2,FOXR1,RPS25,ABCG4,SLC37A4,VPS11,CCDC84,RPL23AP64
SE_02_052700139 chr11:1747030-1797655 50625 139 19 1786 89 1 114 1704 IFITM10,CTSD,TNNI2,SYT8,KRTAP5-6
SE_02_052700247 chr11:35261556-35306340 44784 247 20 1338 143 3 197 409 SLC1A2
SE_02_052700127 chr11:35360695-35404565 43870 127 17 1218 82 16 88 68 SLC1A2
SE_02_052700203 chr11:61129532-61173587 44055 203 16 1245 175 49 90 1084 VPS37C,PGA3,PGA4,CD5
SE_02_052700259 chr11:62538147-62561434 23287 259 17 557 41 2 231 354 AHNAK,MIR3654,EEF1G,TUT1,MTA2,MIR6747
SE_02_052700264 chr11:64835099-64887997 52898 264 14 1609 112 0 310 2917 CDC42BPG,EHD1,GPHA2,ATG2A,MEN1,MAP4K2,PPP2R5B,MIR6749,MIR192,MIR6750,MIR194-2,SF1
SE_02_052700069 chr11:65416184-65455629 39445 69 19 1095 81 2 52 2791 NEAT1,MIR612,MALAT1,SLC25A45,FRMD8,DPF2,CDC42EP2,SCYL1
SE_02_052700027 chr11:65469113-65509692 40579 27 15 1154 123 4 50 963 MALAT1,SCYL1,LTBP3,NEAT1,MIR612,SPDYC,SLC25A45,EHBP1L1,CAPN1,SSSCA1,FRMD8
SE_02_052700285 chr11:67053364-67082798 29434 285 13 790 57 1 95 665 RHOD,SYT12,MIR6860,KDM2A
SE_02_052700149 chr11:69636678-69656442 19764 149 9 619 14 2 148 1150 CCND1,ORAOV1,FGF19
SE_02_052700109 chr11:72756124-72791010 34886 109 12 879 78 2 182 708 MIR4692,STARD10,ARAP1,ATG16L2
SE_02_052700045 chr11:85777139-85853279 76140 45 25 2007 210 7 152 137 SYTL2,CCDC83,CCDC89
SE_02_052700172 chr12:116385598-116449368 63770 172 20 1904 12 5 6 57 MIR4472-2,MED13L
SE_02_052700282 chr12:120227818-120236217 8399 282 3 197 12 0 28 0 PXN,PXN-AS1,GCN1,RPLP0
SE_02_052700106 chr12:121799776-121807097 7321 106 1 151 8 0 164 784 SETD1B,LINC01089,RHOF
SE_02_052700243 chr12:124905065-124941265 36200 243 9 1258 44 4 71 1108 MIR5188,UBC,SCARB1,DHX37
SE_02_052700207 chr12:12714315-12726878 12563 207 6 352 25 2 170 598 CDKN1B,APOLD1,MIR613,GPR19
SE_02_052700087 chr12:131852576-131913166 60590 87 35 1767 108 1 74 1386 ULK1,PUS1,EP400,MMP17
SE_02_052700281 chr12:45725919-45732731 6812 281 4 142 1 0 83 527 ARID2,LINC00938
SE_02_052700039 chr12:46148809-46236020 87211 39 40 2432 144 16 181 1155 SLC38A1
SE_02_052700092 chr12:46254421-46270705 16284 92 8 392 17 4 57 527 SLC38A1
SE_02_052700062 chr12:47067765-47121856 54091 62 26 1449 85 9 156 612 PCED1B,AMIGO2
SE_02_052700006 chr12:52859677-52994099 134422 6 50 3890 417 10 190 1855 KRT18,KRT8,EIF4B,KRT4,KRT79,KRT78,CSAD,SPRYD3,LOC283335
SE_02_052700160 chr12:53215693-53234373 18680 160 10 429 32 0 367 718 RARG,MFSD5,ITGB7,CSAD,ESPL1,ZNF740
SE_02_052700266 chr12:57085621-57102552 16931 266 10 448 31 5 282 1931 NAB2,STAT6,LRP1,LRP1-AS,NEMP1,MYO1A
SE_02_052700189 chr12:6195972-6237651 41679 189 26 1261 76 8 120 723 CD9
SE_02_052700279 chr12:68787265-68811108 23843 279 9 621 42 1 18 442 MDM2,LOC100130075,SLC35E3,NUP107
SE_02_052700144 chr12:97551952-97581385 29433 144 15 726 19 3 191 238 MIR135A2
SE_02_052700075 chr13:22964473-23029557 65084 75 40 2250 70 5 14 0 BASP1P1,SGCG
SE_02_052700280 chr13:33632911-33651980 19069 280 12 529 17 2 23 0 STARD13
SE_02_052700217 chr13:40986468-41026067 39599 217 17 955 79 12 62 46 ELF1,WBP4,LOC100616668
SE_02_052700201 chr13:45511492-45546848 35356 201 24 974 106 2 82 633 COG3,ERICH6B
SE_02_052700085 chr14:100012617-100027053 14436 85 1 384 27 0 6 99 EVL
SE_02_052700256 chr14:103691748-103737588 45840 256 18 1640 101 1 71 3172 KLC1,ZFYVE21,PPP1R13B,XRCC3
SE_02_052700048 chr14:105430192-105484558 54366 48 11 1849 97 2 182 3945 MTA1,CRIP2,C14ORF80,TEX22,CRIP1,TMEM121,LOC100507437
SE_02_052700184 chr14:23689208-23697390 8182 184 2 291 25 3 0 0 DHRS2
SE_02_052700236 chr14:27723432-27742952 19520 236 12 506 0 0 36 0 MIR3171,LINC00645
SE_02_052700227 chr14:35329406-35356137 26731 227 15 899 107 1 41 0 PSMA6,NFKBIA,FAM177A1,KIAA0391,SRP54
SE_02_052700038 chr14:37582930-37603526 20596 38 5 447 24 7 263 735 TTC6,FOXA1
SE_02_052700241 chr14:43760813-43796928 36115 241 24 981 0 2 33 0 FSCB
SE_02_052700084 chr14:49998107-50047839 49732 84 18 1425 98 6 98 1225 LINC01588,LINC01599,MIR6076,C14orf182,ARF6
SE_02_052700147 chr14:55089451-55125097 35646 147 15 900 115 22 29 0 LGALS3,MAPK1IP1L,DLGAP5
SE_02_052700118 chr14:61513816-61568976 55160 118 21 1582 88 22 172 1316 LOC101927780,PRKCH,FLJ22447
SE_02_052700251 chr14:65224607-65260709 36102 251 17 1128 112 6 47 0 LOC100128233,FUT8
SE_02_052700134 chr14:68789198-68819873 30675 134 7 860 18 8 259 827 ZFP36L1
SE_02_052700151 chr14:75252855-75289891 37036 151 13 905 57 6 373 653 FOS,LINC01220,TMED10
SE_02_052700037 chr14:77003842-77072710 68868 37 31 1984 153 14 559 1394 IRF2BPL,LOC102724190,LOC283575,CIPC
SE_02_052700233 chr14:91263956-91292400 28444 233 16 866 42 3 81 1373 CCDC88C,GPR68
SE_02_052700211 chr14:99560851-99623223 62372 211 25 1952 171 3 247 487 CCDC85C,HHIPL1
SE_02_052700252 chr14:99971406-99978108 6702 252 1 186 12 0 0 212 EVL
SE_02_052700231 chr15:87186839-87221180 34341 231 20 1147 0 4 78 0 LINC00052
SE_02_052700074 chr15:87517195-87533179 15984 74 6 602 17 0 53 0 LINC00052
SE_02_052700291 chr15:92634069-92654246 20177 291 7 661 47 3 42 0 FAM174B
SE_02_052700073 chr15:92797783-92845317 47534 73 20 1461 45 0 51 0 LINC01578,ASB9P1,CHD2,FAM174B,LOC100507217
SE_02_052700212 chr15:92867896-92888444 20548 212 8 568 11 3 85 343 LINC01578,CHD2,MIR3175,LOC100507217
SE_02_052700135 chr15:95871760-95922472 50712 135 13 1353 7 4 505 0 NR2F2
SE_02_052700043 chr15:96330670-96341987 11317 43 1 231 0 0 359 1143 NR2F2,MIR1469,NR2F2-AS1
SE_02_052700081 chr15:98648442-98671700 23258 81 7 760 18 1 116 126 IGF1R,IRAIN
SE_02_052700032 chr15:98713511-98805865 92354 32 45 2805 55 43 387 50 IGF1R,MIR4714
SE_02_052700035 chr15:98841562-98916157 74595 35 44 2388 48 5 350 682 IGF1R,MIR4714
SE_02_052700056 chr16:10558655-10630001 71346 56 32 2651 159 5 118 255 TEKT5,EMP2
SE_02_052700292 chr16:14301193-14318793 17600 292 4 517 31 1 0 163 MIR193B,MIR365A
SE_02_052700225 chr16:21509120-21520515 11395 225 3 368 16 0 0 494 SLC7A5P2,SMG1P3,MIR3680-1
SE_02_052700271 chr16:30192641-30210337 17696 271 12 37 2 0 88 2208 SLX1B,SLX1A-SULT1A3,LOC388242,BOLA2,SULT1A4,CORO1A,LOC613037,CD2BP2,GDPD3,LOC595101,MAPK3,TBC1D10B
SE_02_052700196 chr16:54923144-54946977 23833 196 6 613 24 0 346 1100 CRNDE,IRX5
SE_02_052700242 chr16:56324195-56384021 59826 242 21 1762 170 14 160 2406 GNAO1,AMFR
SE_02_052700123 chr16:68722120-68789818 67698 123 24 1860 229 4 119 289 CDH1,MIR7641-2,CDH3
SE_02_052700124 chr16:70681156-70716625 35469 124 16 1071 114 0 216 1605 VAC14,MTSS1L,VAC14-AS1
SE_02_052700255 chr16:72913829-72961617 47788 255 22 1608 62 4 393 761 ZFHX3
SE_02_052700108 chr16:73033102-73071717 38615 108 15 1015 28 3 531 430 ZFHX3,HCCAT5
SE_02_052700031 chr16:74998134-75130490 132356 31 65 4278 301 12 298 2526 ZNRF1,LDHD,ZFP1,WDR59
SE_02_052700098 chr16:84088601-84120411 31810 98 17 1212 118 2 66 572 MBTPS1,DNAAF1,SLC38A8,HSDL1,TAF1C
SE_02_052700072 chr16:84985287-85035554 50267 72 16 1893 264 7 47 523 KIAA0513,ZDHHC7
SE_02_052700018 chr16:85416190-85528650 112460 18 49 4638 119 3 329 0 GSE1,C16orf74
SE_02_052700102 chr16:85544577-85579935 35358 102 21 1251 14 0 246 0 GSE1
SE_02_052700076 chr16:85601544-85660396 58852 76 31 2889 53 0 257 1253 GSE1,GINS2,KIAA0182
SE_02_052700219 chr16:87781453-87810534 29081 219 17 1190 49 1 8 0 KLHDC4,LOC102724467,MIR6775
SE_02_052700245 chr16:87848917-87886093 37176 245 18 1753 106 0 68 352 SLC7A5,MIR6775
SE_02_052700063 chr16:88739376-88785644 46268 63 16 2227 192 15 97 1768 LOC339059,LOC100289580,PIEZO1,CDT1,CTU2,RNF166,MIR4722,APRT,GALNS,TRAPPC2L
SE_02_052700182 chr16:88906176-88937757 31581 182 18 1531 174 1 60 0 CBFA2T3,PABPN1L,GALNS,LOC100129697,TRAPPC2L
SE_02_052700053 chr17:17680931-17756182 75251 53 34 1995 132 1 317 331 RAI1,SMCR2,SMCR5,RAI1-AS1
SE_02_052700094 chr17:40303267-40354992 51725 94 23 1171 67 0 730 1561 RARA-AS1,RARA,CDC6,GJD3
SE_02_052700272 chr17:47947309-47967561 20252 272 14 483 81 5 0 738 PRR15L,PNPO,SP2-AS1,CDK5RAP3
SE_02_052700059 chr17:50890542-50954937 64395 59 31 1796 149 3 174 0 TOB1-AS1,TOB1
SE_02_052700171 chr17:57889823-57901474 11651 171 7 304 23 0 78 0 CUEDC1,MRPS23
SE_02_052700090 chr17:59092981-59109313 16332 90 3 389 32 0 45 323 TRIM37,MIR454,PRR11,MIR301A,SKA2
SE_02_052700060 chr17:59751839-59805350 53511 60 20 1124 106 5 91 71 VMP1,PTRH2,MIR21,RPS6KB1,TUBD1
SE_02_052700004 chr17:59828346-59869537 41191 4 14 996 91 3 119 463 TUBD1,MIR21,VMP1,RPS6KB1,SKA2,PTRH2,RNFT1
SE_02_052700041 chr17:60524006-60530021 6015 41 2 179 16 1 25 193 APPBP2,LOC388406
SE_02_052700077 chr17:61219713-61238906 19193 77 7 461 6 2 68 0 BCAS3,TBX2-AS1
SE_02_052700042 chr17:61351537-61359959 8422 42 5 229 3 0 29 197 BCAS3,TBX2-AS1,TBX2
SE_02_052700024 chr17:61398393-61404521 6128 24 1 170 11 0 132 604 TBX2,TBX2-AS1,C17ORF82
SE_02_052700258 chr17:61556393-61569929 13536 258 4 385 12 1 41 0 NACA2
SE_02_052700051 chr17:66930947-66969507 38560 51 18 1124 74 2 186 166 CACNG4,CACNG1,CACNG5
SE_02_052700068 chr17:74741872-74774320 32448 68 16 972 54 5 186 2448 RAB37,NAT9,SLC9A3R1,MIR3615,TMEM104,CD300LF
SE_02_052700105 chr17:75531529-75573498 41969 105 20 1392 194 2 170 2621 LLGL2,CASKIN2,MIR6785,MYO15B,TSEN54,C17ORF109
SE_02_052700167 chr17:81327850-81350207 22357 167 7 739 56 0 104 217 TMEM105,BAHCC1,LINC00482,SLC38A10,LOC100130370
SE_02_052700170 chr17:83048353-83121402 73049 170 27 2724 307 3 130 1079 METRNL,B3GNTL1
SE_02_052700191 chr17_KI270860v1_alt:243-54841 54598 191 25 0 0 0 0 0 METRNL,B3GNTL1
SE_02_052700026 chr18:36093941-36140488 46547 26 21 1243 149 34 128 977 SLC39A6,ELP2,MOCOS,RPRD1A
SE_02_052700177 chr19:1161545-1215570 54025 177 17 1796 93 3 75 664 STK11,SBNO2,ATP5D,CBARP,MIDN
SE_02_052700220 chr19:1244693-1267046 22353 220 12 854 21 1 254 1785 ATP5D,MIDN,C19ORF24,CIRBP,CIRBP-AS1,STK11,CBARP,EFNA2
SE_02_052700145 chr19:12777262-12796569 19307 145 6 435 38 1 305 517 JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1
SE_02_052700150 chr19:13140894-13173384 32490 150 11 843 54 2 116 1360 NACC1,IER2,STX10,LYL1,TRMT1
SE_02_052700222 chr19:38636647-38666961 30314 222 14 868 74 1 120 274 EIF3K,ACTN4,MAP4K1
SE_02_052700165 chr19:39125756-39168734 42978 165 25 1453 130 1 79 249 PAK4,PAPL,SYCN,NCCRP1
SE_02_052700100 chr19:45090968-45130968 40000 100 18 1319 165 5 42 293 PPP1R37,GEMIN7,TRAPPC6A,NKPD1,BLOC1S3,ZNF296
SE_02_052700192 chr19:46782690-46842504 59814 192 15 1765 139 2 70 1066 AP2S1,SNAR-E,SLC1A5,FKRP,STRN4
SE_02_052700113 chr19:47079663-47133580 53917 113 14 1605 48 1 218 1292 SAE1,ZC3H4,TMEM160,NPAS1,ARHGAP35
SE_02_052700011 chr2:11476976-11588713 111737 11 71 3297 86 7 186 1412 MIR4429,GREB1,E2F6
SE_02_052700086 chr2:128260403-128322659 62256 86 36 1988 145 6 154 1006 HS6ST1
SE_02_052700293 chr2:131543069-131568316 25247 293 21 880 79 0 0 0 CCDC74A,POTEKP
SE_02_052700215 chr2:133491309-133519744 28435 215 14 866 13 3 96 38 NCKAP5
SE_02_052700221 chr2:141435585-141476082 40497 221 18 1256 35 5 55 0 LRP1B
SE_02_052700091 chr2:142856572-142921102 64530 91 28 1702 123 3 67 174 KYNU
SE_02_052700294 chr2:161861832-161874707 12875 294 7 278 21 0 74 99 SLC4A10,DPP4
SE_02_052700050 chr2:20438263-20510595 72332 50 34 2247 25 11 236 498 RHOB
SE_02_052700178 chr2:215205167-215240039 34872 178 14 1049 12 0 34 0 ABCA12
SE_02_052700058 chr2:215921804-216021611 99807 58 49 2821 98 6 160 578 MREG,TMEM169
SE_02_052700257 chr2:217671144-217714071 42927 257 20 1088 60 2 139 0 DIRC3
SE_02_052700289 chr2:218395592-218407497 11905 289 3 444 25 1 126 1801 SLC11A1,CTDSP1,MIR26B,CATIP-AS2,CATIP,VIL1,CATIP-AS1
SE_02_052700064 chr2:226113620-226164565 50945 64 20 1333 65 10 132 150 LOC646736
SE_02_052700111 chr2:226789969-226802363 12394 111 4 337 14 3 258 911 IRS1,RHBDD1
SE_02_052700218 chr2:236691562-236753415 61853 218 23 2176 47 2 152 0 ACKR3
SE_02_052700224 chr2:236811304-236827676 16372 224 8 550 14 2 18 0 ACKR3
SE_02_052700208 chr2:236964983-237000795 35812 208 19 1167 24 4 44 0 COPS8
SE_02_052700080 chr2:237482740-237491652 8912 80 1 284 50 0 9 302 MLPH,MIR6811
SE_02_052700238 chr2:237492507-237502610 10103 238 1 367 37 0 3 67 MLPH,MIR6811
SE_02_052700131 chr2:28358314-28396785 38471 131 16 1115 79 5 176 920 FOSL2,FLJ31356,LOC100505716
SE_02_052700230 chr2:70084952-70095391 10439 230 2 294 21 0 139 686 PCBP1-AS1,PCBP1,LOC100133985
SE_02_052700240 chr2:70123216-70144327 21111 240 11 609 72 1 44 273 LOC100133985,PCBP1,PCBP1-AS1,C2ORF42
SE_02_052700260 chr2:8676269-8685946 9677 260 4 321 9 0 256 321 ID2,ID2-AS1
SE_02_052700029 chr2:96860027-96908318 48291 29 19 1422 120 4 291 2533 FAM178B,SEMA4C,LOC101927053,ANKRD39,ANKRD23,CNNM3
SE_02_052700164 chr20:19756753-19786120 29367 164 16 765 28 6 40 0 RIN2,NAA20
SE_02_052700206 chr20:31587783-31612911 25128 206 13 782 75 4 169 400 MIR3193,ID1,COX4I2,MCTS2P,HM13-AS1
SE_02_052700175 chr20:31698554-31723997 25443 175 16 579 42 3 205 364 ABALON,BCL2L1,TPX2
SE_02_052700183 chr20:360268-380529 20261 183 11 683 91 4 20 4 RBCK1,SOX12,TRIB3,NRSN2,NRSN2-AS1,TBC1D20
SE_02_052700261 chr20:45335833-45348427 12594 261 7 361 44 3 122 124 SDC4,SYS1,SYS1-DBNDD2,MATN4,RBPJL,TP53TG5
SE_02_052700153 chr20:47195324-47207462 12138 153 6 366 14 2 5 0 MIR3616
SE_02_052700002 chr20:47303631-47393136 89505 2 39 2528 19 4 212 1313 ZMYND8,LOC100131496
SE_02_052700020 chr20:47428290-47465773 37483 20 11 1033 51 6 0 0 NCOA3
SE_02_052700016 chr20:47484875-47547016 62141 16 22 1456 103 1 41 410 NCOA3
SE_02_052700014 chr20:47766128-47821849 55721 14 20 1716 117 19 134 259 SULF2
SE_02_052700010 chr20:47962928-48036434 73506 10 32 2051 95 7 39 0 LINC01522,LINC01523
SE_02_052700023 chr20:48051032-48082968 31936 23 14 902 25 0 25 0 LINC01522
SE_02_052700223 chr20:48143260-48166692 23432 223 10 805 10 11 56 0 LINC01522
SE_02_052700096 chr20:48794130-48831791 37661 96 14 1074 69 6 88 196 PREX1
SE_02_052700288 chr20:50141430-50167025 25595 288 11 692 109 2 14 345 TMEM189-UBE2V1,TMEM189,CEBPB-AS1,CEBPB,UBE2V1,LINC01273
SE_02_052700198 chr20:50186999-50194916 7917 198 3 184 8 1 84 594 CEBPB,CEBPB-AS1,LINC01273,TMEM189-UBE2V1
SE_02_052700119 chr20:50658397-50680549 22152 119 14 637 33 1 24 0 LOC100506175,FAM65C,MIR1302-5
SE_02_052700001 chr20:50708701-50799733 91032 1 42 2497 206 5 160 761 PARD6B,BCAS4,FAM65C,ADNP,PTPN1,MOCS3
SE_02_052700193 chr20:51715348-51761097 45749 193 12 1496 119 1 0 129 ATP9A,SALL4
SE_02_052700008 chr20:53578618-53599021 20403 8 10 487 5 1 126 449 ZNF217,LOC101927770
SE_02_052700079 chr20:53613291-53624897 11606 79 3 291 2 0 20 0 ZNF217
SE_02_052700015 chr20:53639562-53692950 53388 15 21 1498 28 3 76 0 ZNF217
SE_02_052700003 chr20:53708295-53873556 165261 3 67 4851 67 16 88 0 SUMO1P1
SE_02_052700148 chr20:53898138-53921994 23856 148 8 693 11 1 32 0 SUMO1P1
SE_02_052700133 chr20:54066445-54084991 18546 133 3 555 78 10 12 181 BCAS1,MIR4756
SE_02_052700275 chr20:54122256-54125546 3290 275 2 81 0 2 5 0 CYP24A1
SE_02_052700286 chr20:56629281-56632079 2798 286 1 102 2 0 67 462 TFAP2C
SE_02_052700161 chr20:57687754-57719115 31361 161 9 906 25 0 105 885 NKILA,PMEPA1
SE_02_052700234 chr20:60057998-60079934 21936 234 9 704 50 1 22 354 C20ORF197,LOC729296
SE_02_052700185 chr20:62349860-62381032 31172 185 24 1231 116 0 165 779 LAMA5,LAMA5-AS1,CABLES2,RBBP8NL,RPS21,MIR4758,ADRM1
SE_02_052700249 chr21:15190125-15220286 30161 249 18 921 36 6 155 0 NRIP1
SE_02_052700277 chr21:35205319-35275761 70442 277 30 1962 20 4 206 0 RUNX1
SE_02_052700005 chr21:40308290-40418160 109870 5 35 3305 13 23 68 682 DSCAM-AS1,DSCAM
SE_02_052700141 chr21:42361425-42392046 30621 141 15 1202 69 5 99 1536 TFF1,TMPRSS3,TFF2,UBASH3A,TFF3
SE_02_052700296 chr21:45510667-45523980 13313 296 6 507 24 1 13 920 COL18A1,SLC19A1,MIR6815
SE_02_052700025 chr22:28783468-28830463 46995 25 22 1153 130 3 126 891 XBP1,CCDC117,CHEK2,HSCB
SE_02_052700120 chr22:49931274-49976097 44823 120 21 1485 158 5 150 881 MIR6821,PIM3,IL17REL,CRELD2,ALG12
SE_02_052700202 chr3:107956098-108006966 50868 202 25 1562 101 6 263 0 LINC00636
SE_02_052700204 chr3:113532011-113558777 26766 204 8 742 121 2 58 218 SIDT1,MIR4446,SPICE1
SE_02_052700138 chr3:129482816-129512559 29743 138 22 900 104 4 179 968 IFT122,H1FOO,RHO,MBD4
SE_02_052700162 chr3:133428082-133499340 71258 162 27 2070 120 8 111 695 BFSP2
SE_02_052700030 chr3:134308595-134383057 74462 30 27 2010 118 7 369 1806 AMOTL2,MIR6827
SE_02_052700235 chr3:13500912-13546428 45516 235 21 1429 75 3 92 965 HDAC11,FBLN2,HDAC11-AS1
SE_02_052700228 chr3:149383760-149408300 24540 228 12 649 44 1 50 0 TM4SF1-AS1,TM4SF1,TM4SF18
SE_02_052700101 chr3:150721752-150771327 49575 101 17 1199 85 4 154 593 SIAH2,LOC101928105,ERICH6-AS1,ERICH6
SE_02_052700007 chr3:161253023-161424798 171775 7 72 4418 557 16 237 411 SPTSSB,NMD3,LOC101243545
SE_02_052700176 chr3:189292514-189331226 38712 176 24 1043 16 4 154 320 TPRG1,TPRG1-AS2
SE_02_052700157 chr3:194130440-194161585 31145 157 14 906 27 4 292 492 HES1,LOC100505920
SE_02_052700117 chr3:46926124-46987707 61583 117 32 1578 193 3 147 512 CCDC12,NBEAL2,PTH1R,NRADDP
SE_02_052700093 chr3:57998847-58072627 73780 93 31 1973 150 14 152 195 FLNB
SE_02_052700121 chr3:61625709-61647104 21395 121 14 631 5 3 55 0 PTPRG
SE_02_052700114 chr3:64149157-64162217 13060 114 7 397 19 1 65 195 PRICKLE2,PRICKLE2-AS2,PRICKLE2-AS3,PSMD6
SE_02_052700190 chr4:124937885-124997606 59721 190 24 1569 54 3 53 0 ANKRD50
SE_02_052700065 chr4:140688969-140757878 68909 65 38 1667 102 12 87 282 TBC1D9,TNRC18P1
SE_02_052700199 chr4:3459907-3492005 32098 199 21 1430 168 3 87 942 DOK7,HGFAC,LRPAP1
SE_02_052700237 chr4:39514437-39549835 35398 237 12 888 133 3 44 448 UGDH,UGDH-AS1,LOC401127
SE_02_052700232 chr5:118006328-118028729 22401 232 11 624 4 0 54 0 LOC102467224,HNCAT21,LOC102467225
SE_02_052700216 chr5:134508545-134528314 19769 216 5 442 41 4 297 625 JADE2,LOC101927934
SE_02_052700022 chr5:139633545-139711621 78076 22 26 1806 112 7 1066 572 CXXC5,LOC101929696
SE_02_052700210 chr5:1512023-1524735 12712 210 5 466 36 3 25 214 LPCAT1,MIR6075
SE_02_052700082 chr5:173283590-173333610 50020 82 19 1404 17 4 219 1329 STC2,NKX2-5,MIR8056
SE_02_052700034 chr5:173450800-173592440 141640 34 55 4048 301 27 187 518 LOC285593,BOD1
SE_02_052700061 chr5:178076078-178129160 53082 61 36 1525 98 5 183 1710 N4BP3,RMND5B,NHP2,HNRNPAB
SE_02_052700028 chr5:67191238-67249911 58673 28 16 1718 67 5 154 70 CD180
SE_02_052700009 chr6:151608902-151722480 113578 9 39 3145 127 77 193 589 CCDC170,ESR1,C6orf211,AKAP12,RMND1,ZBTB2
SE_02_052700254 chr6:25153555-25207515 53960 254 25 1581 123 10 4 64 CMAHP
SE_02_052700156 chr6:34534054-34557356 23302 156 13 734 63 2 86 1270 PACSIN1,SPDEF
SE_02_052700070 chr6:49531573-49558593 27020 70 15 753 71 3 27 517 C6ORF141,GLYATL3
SE_02_052700126 chr6:54842267-54886577 44310 126 25 1264 130 3 59 189 FAM83B
SE_02_052700248 chr6:7519792-7561855 42063 248 21 1191 96 7 147 454 DSP,SNRNP48
SE_02_052700250 chr7:104999834-105015858 16024 250 2 493 19 0 91 724 KMT2E,KMT2E-AS1,LINC01004
SE_02_052700115 chr7:1073255-1135767 62512 115 31 2543 353 31 79 989 C7ORF50,GPER1,LOC101927021,GPR146,ZFAND2A
SE_02_052700083 chr7:108328362-108376255 47893 83 18 1268 135 4 117 0 NRCAM
SE_02_052700158 chr7:128423529-128460585 37056 158 12 897 144 1 39 357 HILPDA,METTL2B,IMPDH1
SE_02_052700169 chr7:156703336-156752851 49515 169 27 1325 98 14 125 211 LMBR1,RNF32
SE_02_052700287 chr7:157272347-157293494 21147 287 13 761 51 0 0 0 DNAJB6
SE_02_052700269 chr7:2519841-2541079 21238 269 11 740 48 1 177 1982 MIR4648,LFNG,BRAT1,IQCE,GRIFIN
SE_02_052700036 chr7:5413007-5430435 17428 36 4 538 3 0 266 846 TNRC18
SE_02_052700067 chr7:73736505-73774330 37825 67 9 937 79 2 47 987 ABHD11,CLDN3,MIR4284,STX1A,ABHD11-AS1
SE_02_052700163 chr7:73809613-73856098 46485 163 14 1147 156 3 70 1773 CLDN4,WBSCR27,WBSCR28,CLDN3,ABHD11,STX1A,TBL2
SE_02_052700194 chr7:74451543-74485211 33668 194 18 867 45 0 89 274 GTF2IRD1
SE_02_052700040 chr7:76281609-76319469 37860 40 17 1251 129 2 124 2002 SRRM3,HSPB1,YWHAG
SE_02_052700142 chr7:80917005-80945318 28313 142 10 841 23 1 78 177 SEMA3C
SE_02_052700262 chr8:101358831-101389725 30894 262 10 817 32 2 22 316 NACAP1
SE_02_052700019 chr8:101431988-101520692 88704 19 37 2556 27 12 182 116 GRHL2
SE_02_052700146 chr8:101599322-101619309 19987 146 9 594 61 0 55 0 GRHL2
SE_02_052700181 chr8:115661291-115672038 10747 181 3 209 2 0 278 275 TRPS1
SE_02_052700128 chr8:122779810-122789053 9243 128 6 228 7 0 160 169 ZHX2
SE_02_052700179 chr8:126555529-126580604 25075 179 7 717 28 9 149 629 FAM84B
SE_02_052700130 chr8:127781780-127833193 51413 130 14 1431 55 5 76 207 MIR1204,MYC,CASC11
SE_02_052700057 chr8:143933465-143977779 44314 57 15 1346 131 5 326 2872 PLEC,PARP10,MIR661,GRINA,SPATC1
SE_02_052700107 chr8:17497093-17557797 60704 107 25 2319 160 12 160 508 SLC7A2,PDGFRL
SE_02_052700140 chr8:29722762-29785445 62683 140 31 1749 25 1 142 231 LOC101929450,LINC00589,LOC101929470
SE_02_052700284 chr8:66512084-66542828 30744 284 14 919 34 1 103 420 C8ORF46,C8orf46,MYBL1
SE_02_052700154 chr8:85835610-85867551 31941 154 10 747 30 1 30 0 REXO1L2P
SE_02_052700052 chr8:90620315-90651122 30807 52 13 741 83 1 114 1003 TMEM64,LINC01030
SE_02_052700116 chr8:90670176-90701020 30844 116 19 735 68 0 22 0 TMEM64
SE_02_052700046 chr8:90847669-90920159 72490 46 43 1632 180 0 93 88 NECAB1
SE_02_052700055 chr8:95062588-95115994 53406 55 22 1423 198 6 29 578 MIR3150A,MIR3150B,PLEKHF2,NDUFAF6
SE_02_052700110 chr9:111959563-112035068 75505 110 40 2187 128 3 64 37 MIR4668
SE_02_052700197 chr9:126638250-126677663 39413 197 17 1122 45 7 395 0 LMX1B
SE_02_052700159 chr9:127541940-127584245 42305 159 17 1190 160 4 130 304 FAM129B,STXBP1
SE_02_052700244 chr9:12775002-12795777 20775 244 14 663 15 2 74 208 LURAP1L,LURAP1L-AS1
SE_02_052700066 chr9:129163989-129203367 39378 66 11 1068 84 3 247 812 IER5L
SE_02_052700017 chr9:129432849-129507397 74548 17 33 2175 118 0 182 874 LINC00963
SE_02_052700099 chr9:13033193-13096600 63407 99 26 2019 44 1 119 0 MPDZ
SE_02_052700071 chr9:133861684-133898392 36708 71 18 1368 58 3 23 0 VAV2,BRD3
SE_02_052700013 chr9:134315546-134456492 140946 13 64 5063 162 17 477 5320 RXRA,MIR4669
SE_02_052700168 chr9:137592438-137616663 24225 168 9 718 65 0 62 1091 ARRDC1-AS1,ARRDC1,MRPL41,ZMYND19,DPH7,PNPLA7,EHMT1
SE_02_052700174 chr9:33211988-33264714 52726 174 16 1426 179 6 89 1160 SPINK4,BAG1,B4GALT1-AS1,NFX1,CHMP5,B4GALT1
SE_02_052700097 chr9:5817162-5884961 67799 97 23 2259 159 8 72 314 ERMP1,MLANA
SE_02_052700112 chr9:88519861-88537613 17752 112 8 478 27 1 20 253 NXNL2
SE_02_052700089 chr9:90915276-90979604 64328 89 34 1939 79 7 36 0 SYK
SE_02_052700273 chr9:93443437-93473493 30056 273 12 744 78 1 75 947 FAM120A,FAM120AOS
SE_02_052700137 chr9:94621894-94643802 21908 137 13 582 91 3 22 301 FBP1,FBP2
SE_02_052700122 chr9:94901857-94927978 26121 122 7 682 42 0 115 143 C9ORF3,MIR2278
SE_02_052700200 chr9:94989390-95009127 19737 200 13 463 29 1 61 289 C9ORF3,MIR6081
SE_02_052700129 chrX:115844224-115899251 55027 129 18 398 23 0 0 0 DANT2
SE_02_052700265 chrX:116226959-116243391 16432 265 11 444 30 0 41 0 AGTR2,SLC6A14
SE_02_052700103 chrX:131728845-131822396 93551 103 24 1693 107 1 6 566 FIRRE

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2859580
Input ID: Name:GSM2859574
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb