SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: HIST1H3H Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000200033 chr6:27126074-27151177 Sample_04_0002 Blood cold shocked K562 33 1 762 47 2 102 808 HIST1H2BK,HIST1H4I,HIST1H2AG,MIR3143,HIST1H2AH,HIST1H2BJ,ZNF184,ABT1,HIST1H2BD,HIST1H4H,POM121L2,HIST1H2AE,HIST1H1E,HIST1H2AC,HIST1H2BC,HIST1H2AJ,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2BG,HIST1H4D,HIST1H2BO,HIST1H2BM,HIST1H2AI,HIST1H2AD,HIST1H3J,HIST1H4J,HIST1H3D,HIST1H2BF,HIST1H4K,HIST1H2AL,HIST1H4E,HIST1H3H,HIST
SE_04_000100142 chr6:27126633-27150500 Sample_04_0001 Blood heat shocked K562 142 1 737 45 2 102 745 HIST1H2BK,HIST1H4I,HIST1H2AG,MIR3143,HIST1H2AH,HIST1H2BJ,ZNF184,ABT1,HIST1H2BD,HIST1H4H,POM121L2,HIST1H2AE,HIST1H1E,HIST1H2AC,HIST1H2BC,HIST1H2AJ,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2BG,HIST1H4D,HIST1H2BO,HIST1H2BM,HIST1H2AI,HIST1H2AD,HIST1H3J,HIST1H4J,HIST1H3D,HIST1H2BF,HIST1H4K,HIST1H2AL,HIST1H4E,HIST1H3H,HIST
SE_01_003900577 chr6:27144655-27148264 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 577 1 162 14 1 49 223 HIST1H2BK,HIST1H2AH,MIR3143,HIST1H2AG,HIST1H4I,HIST1H2BJ,ABT1,HIST1H1B,HIST1H1E,HIST1H2AC,HIST1H2AD,HIST1H2AE,HIST1H2AI,HIST1H2AJ,HIST1H2AK,HIST1H2AL,HIST1H2A,HIST1H2BC,HIST1H2BD,HIST1H2BF,HIST1H2BG,HIST1H2BL,HIST1H2B,HIST1H2BN,HIST1H2BO,HIST1H3D,HIST1H3H,HIST1H3J,HIST1H4D,HIST1H4E,HIST1H4H
SE_02_098800905 chr6:27157247-27189110 Sample_02_0988 Blood K562_EPZ 905 7 756 94 2 0 133 HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK,HIST1H2BJ,HIST1H2AG,HIST1H2BD,HIST1H2AK,HIST1H2BL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4J,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_103300234 chr6:27494859-27631413 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 234 22 3459 314 10 6 948 ZNF184,HIST1H2BJ,HIST1H2AH,HIST1H2BL,HIST1H2BO,HIST1H2AI,HIST1H2AG,HIST1H3J,HIST1H2BK,HIST1H3H,HIST1H2AM
SE_04_000200895 chr6:27543780-27568934 Sample_04_0002 Blood cold shocked K562 895 4 678 67 2 4 209 ZNF184,HIST1H2BJ,HIST1H2AH,HIST1H2BO,HIST1H2AG,HIST1H3J,HIST1H2BK,HIST1H3H,HIST1H2AM
SE_02_058400807 chr6:27662766-27688787 Sample_02_0584 Lung H1299 WT 807 6 754 81 2 0 375 LINC01012,HIST1H2BL,HIST1H3H
SE_02_047801068 chr6:27771952-27794321 Sample_02_0478 Colon normal colon mucosa 1068 12 553 60 3 0 98 HIST1H2AK,HIST1H2BM,HIST1H2AJ,HIST1H2BN,HIST1H2AI,HIST1H4K,HIST1H3H,HIST1H2BL,HIST1H4J,LOC100131289
SE_02_098800357 chr6:27772075-27793876 Sample_02_0988 Blood K562_EPZ 357 10 542 59 3 0 98 HIST1H2AK,HIST1H2BM,HIST1H2AJ,HIST1H2BN,HIST1H2AI,HIST1H4K,HIST1H3H,HIST1H2BL,HIST1H4J,LOC100131289,HIST1H2BJ,HIST1H2AH,HIST1H2AG,HIST1H2BK,HIST1H4I
SE_02_058400814 chr6:27822214-27827978 Sample_02_0584 Lung H1299 WT 814 1 223 21 0 22 459 HIST1H4J,HIST1H2AL,HIST1H3I,HIST1H2AK,HIST1H2BM,HIST1H2AJ,HIST1H2BN,HIST1H2AI,HIST1H4K,HIST1H4L,HIST1H2BL,HIST1H1B,HIST1H3H,HIST1H2BO,HIST1H3J,HIST1H2AM
SE_02_058400610 chr6:27828150-27833110 Sample_02_0584 Lung H1299 WT 610 1 164 14 0 17 118 HIST1H4K,HIST1H2AL,HIST1H3I,HIST1H2AK,HIST1H2BM,HIST1H2AJ,HIST1H2BN,HIST1H2AI,HIST1H4L,HIST1H2BL,HIST1H4J,HIST1H1B,HIST1H3H,OR2B2,HIST1H2BO,HIST1H3J,HIST1H2AM
SE_00_004500091 chr6:27887734-27903526 Sample_00_0045 Thymus thymus 91 2 452 41 7 41 411 HIST1H2BO,HIST1H3J,HIST1H2AM,HIST1H3I,HIST1H2AK,HIST1H2BN,HIST1H4L,HIST1H2AL,OR2B2,HIST1H1B,HIST1H2AI,HIST1H2AJ,HIST1H2A,HIST1H2BL,HIST1H2B,HIST1H3H,HIST1H4J,HIST1H4K
SE_02_073900321 chr6:27887953-27896972 Sample_02_0739 Blood Nalm6 321 1 249 17 3 40 317 HIST1H3J,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H2AK,HIST1H2BN,HIST1H4L,OR2B2,HIST1H1B,ZKSCAN8,HIST1H2BL,HIST1H2BM,HIST1H3H,HIST1H4K,OR2B6,HIST1H2AJ
SE_02_088500838 chr6:27888090-27896647 Sample_02_0885 Blood NALM6_2 838 1 232 16 3 40 317 HIST1H3J,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H2AK,HIST1H2BN,HIST1H4L,OR2B2,HIST1H1B,ZKSCAN8,HIST1H2BL,HIST1H2BM,HIST1H3H,HIST1H4K,OR2B6,HIST1H2AJ
SE_02_121600356 chr6:27893377-27896441 Sample_02_1216 Blood Jurkat ZBTB1 KO 356 1 88 6 1 11 106 HIST1H2BO,HIST1H2AL,HIST1H3I,HIST1H2AM,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B,HIST1H2AI,HIST1H2AK,HIST1H2BN,HIST1H2BM,HIST1H3H,HIST1H2AG,HIST1H2AJ
SE_02_121700422 chr6:27893384-27896360 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 422 1 86 6 1 11 104 HIST1H2BO,HIST1H2AL,HIST1H3I,HIST1H2AM,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B,HIST1H2AI,HIST1H2AK,HIST1H2BN,HIST1H2BM,HIST1H3H,HIST1H2AG,HIST1H2AJ
SE_01_011200531 chr6:27893478-27903293 Sample_01_0112 Embryonic kidney HEK293_encode 531 2 300 27 5 12 187 HIST1H2BO,HIST1H2AL,HIST1H3I,HIST1H2AM,HIST1H4L,HIST1H3J,OR2B2,HIST1H1B,ZKSCAN8,HIST1H2AI,HIST1H2AK,HIST1H2BL,HIST1H2BN,HIST1H3H,HIST1H4K,HIST1H2AH
SE_02_109900649 chr6:28209966-28228133 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 649 6 429 53 7 0 981 ZSCAN9,TOB2P1,ZNF192P1,NKAPL,ZSCAN26,ZKSCAN4,PGBD1,ZSCAN12,ZKSCAN3,HIST1H3J,ZNF165,HIST1H4K,ZKSCAN8,HIST1H2AM,ZSCAN31,HIST1H2AI,HIST1H2AK,HIST1H2AL,HIST1H2BL,HIST1H2BN,HIST1H2BM,HIST1H2BO,HIST1H3I,HIST1H3H,HIST1H4L,HIST1H1B,HIST1H2AJ
SE_02_098700503 chr6:28211093-28228145 Sample_02_0987 Blood K562_Control_1 503 4 400 48 6 0 981 ZSCAN9,TOB2P1,ZNF192P1,NKAPL,ZSCAN26,ZKSCAN4,PGBD1,ZSCAN12,ZKSCAN3,HIST1H3J,ZNF165,HIST1H4K,ZKSCAN8,HIST1H2AM,ZSCAN31,HIST1H2AI,HIST1H2AK,HIST1H2AL,HIST1H2BL,HIST1H2BN,HIST1H2BM,HIST1H2BO,HIST1H3I,HIST1H3H,HIST1H4L,HIST1H1B,HIST1H2AJ
SE_02_122901159 chr6:28211151-28229163 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1159 8 423 51 6 0 981 ZSCAN9,TOB2P1,ZNF192P1,NKAPL,ZSCAN26,ZKSCAN4,PGBD1,ZSCAN12,ZKSCAN3,HIST1H3J,ZNF165,HIST1H4K,ZKSCAN8,HIST1H2AM,ZSCAN31,HIST1H2AI,HIST1H2AK,HIST1H2AL,HIST1H2BL,HIST1H2BN,HIST1H2BM,HIST1H2BO,HIST1H3I,HIST1H3H,HIST1H4L,HIST1H1B,HIST1H2AJ
SE_04_000100123 chr6:28329646-28357808 Sample_04_0001 Blood heat shocked K562 123 4 601 132 13 21 796 ZSCAN31,ZKSCAN3,PGBD1,ZSCAN12,ZSCAN9,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_04_000200199 chr6:28332271-28357860 Sample_04_0002 Blood cold shocked K562 199 2 557 126 12 20 743 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_122900427 chr6:28332775-28358028 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 427 9 547 124 12 21 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_103300080 chr6:28332816-28358050 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 80 4 545 124 12 21 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_113000176 chr6:28332953-28357654 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 176 5 537 122 12 20 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_098700169 chr6:28333078-28356969 Sample_02_0987 Blood K562_Control_1 169 7 524 119 12 20 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_111600264 chr6:28333212-28357656 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 264 5 533 122 12 20 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_054500196 chr6:28333260-28357810 Sample_02_0545 Bone marrow K562 WT 196 4 535 122 12 20 725 ZSCAN31,ZKSCAN3,ZSCAN12,ZSCAN9,PGBD1,HIST1H2AK,HIST1H2BL,ZKSCAN4,NKAPL,HIST1H2BO,HIST1H2AI,HIST1H3J,HIST1H4K,ZKSCAN8,HIST1H2AL,HIST1H3H,HIST1H2AM,HIST1H2BN
SE_02_098800865 chr6:28542102-28568949 Sample_02_0988 Blood K562_EPZ 865 7 564 63 4 0 43 GPX6,GPX5,ZBED9,ZSCAN12,HIST1H2BL,HIST1H2AI,ZSCAN16,HIST1H3H,SCAND3
Genomic distribution of SEs associated with HIST1H3H
Genome Browser

The strength of the tissue affected by the gene

Expression of HIST1H3H

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)