SEdb 2.0
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Super-enhancer overview

SE ID: SE_04_000100123
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: heat shocked K562
Genomic region: chr6:28329646-28357808
Size: 28162
Super-enhancer rank 123
Number of SE elements: 4
ChIP density(Case|Control): 131254.6334|9361.0488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZKSCAN3;
ROSE Overlap ZSCAN31; ZKSCAN3;
ROSE Proximal PGBD1; ZSCAN31; ZSCAN12;
ROSE Closest ZKSCAN3;
Lasso ZSCAN9; PGBD1; ZSCAN12; HIST1H2AK; HIST1H2BL; ZKSCAN4; NKAPL; HIST1H2BO; HIST1H2AI; HIST1H3J; HIST1H4K; ZKSCAN8; HIST1H2AL; HIST1H3H; HIST1H2AM; HIST1H2BN;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000100123 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers