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Super-enhancer overview

SE ID: SE_02_113000176
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr6:28332953-28357654
Size: 24701
Super-enhancer rank 176
Number of SE elements: 5
ChIP density(Case|Control): 51852.3392|5765.2134
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZKSCAN3 ;
ROSE Overlap ZSCAN31 ; ZKSCAN3 ;
ROSE Proximal ZSCAN31 ; ZSCAN12 ;
ROSE Closest ZKSCAN3 ;
Lasso ZSCAN9 ; PGBD1 ; ZSCAN12 ; HIST1H2AK ; HIST1H2BL ; ZKSCAN4 ; NKAPL ; HIST1H2BO ; HIST1H2AI ; HIST1H3J ; HIST1H4K ; ZKSCAN8 ; HIST1H2AL ; HIST1H3H ; HIST1H2AM ; HIST1H2BN ;
PreSTIGE ;
ABC ;
BETA ZSCAN31 ; ZSCAN26 ; ZSCAN23 ; ZKSCAN4 ; PGBD1 ; ZSCAN12 ; ZKSCAN3 ; NKAPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000176 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers