SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109900649
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_DMSO_noIFNG
Genomic region: chr6:28209966-28228133
Size: 18167
Super-enhancer rank 649
Number of SE elements: 6
ChIP density(Case|Control): 30636.8288|6761.7574
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TOB2P1 ;
ROSE Overlap ZSCAN9 ; TOB2P1 ;
ROSE Proximal ZNF192P1 ; NKAPL ; ZSCAN26 ; ZSCAN9 ; ZKSCAN4 ;
ROSE Closest TOB2P1 ;
Lasso PGBD1 ; ZSCAN12 ; ZKSCAN4 ; NKAPL ; ZKSCAN3 ; HIST1H3J ; ZNF165 ; HIST1H4K ; ZKSCAN8 ; HIST1H2AM ; ZSCAN31 ; ZSCAN26 ; HIST1H2AI ; HIST1H2AK ; HIST1H2AL ; HIST1H2BL ; HIST1H2BN ; HIST1H2BM ; HIST1H2BO ; HIST1H3I ; HIST1H3H ; HIST1H4L ; HIST1H1B ; ZSCAN9 ; HIST1H2AJ ;
PreSTIGE ;
ABC ;
BETA ZSCAN26 ; ZKSCAN8 ; ZSCAN16-AS1 ; TOB2P1 ; ZKSCAN4 ; ZNF192P1 ; ZSCAN16 ; ZSCAN9 ; PGBD1 ; NKAPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109900649 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers