SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000204472
Gene: AIF1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:31615217-31617021 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_003900369 chr6:31539216-31543653 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 369 1 137 30 7 38 452 SNORD84,BAT1,LST1,SNORD117,MCCD1,NFKBIL1,LTA,TNF,NCR3,LTB,ATP6V1G2,MICB,AIF1,APO,BAG6,C6orf47,CSNK2B,DDAH2,DXO,FKBPL,GPANK1,GPS3,HSPA1A,HSPA1B,HSPA1L,LS2,ICB,NEU1,PRRC2A,VWA7
SE_00_004500089 chr6:31540768-31593506 Sample_00_0045 Thymus thymus 89 9 1351 236 54 343 4017 NFKBIL1,SNORD84,LTB,NCR3,LTA,LST1,ATP6V1G2,BAT1,TNF,AIF1,SNORD117,MCCD1,BAT2,SNORA38,MICB,ABHD16A,APO,ATP6V1G2-DDX39B,BAG6,CSNK2B,DDX39B,LY6G6C,LY6G6E,CCD1,ICB,PRRC2A
SE_00_004000135 chr6:31540794-31593379 Sample_00_0040 Spleen spleen_30y 135 7 1348 235 54 343 4017 NFKBIL1,SNORD84,LTB,NCR3,LTA,LST1,ATP6V1G2,BAT1,TNF,AIF1,SNORD117,MCCD1,BAT2,SNORA38,MICB,ATP6V1G2-DDX39B,DDX39B,LY6G5B,LY6G5C,LY6G6C,LY6G6F,CCD1,EGT1,ICB
SE_00_003900062 chr6:31540924-31594129 Sample_00_0039 Spleen spleen_3y 62 8 1362 239 54 343 4002 NFKBIL1,SNORD84,LTB,NCR3,LTA,LST1,ATP6V1G2,BAT1,TNF,AIF1,SNORD117,MCCD1,BAT2,SNORA38,MICB,ATP6V1G2-DDX39B,DDX39B,LY6G5B,LY6G5C,LY6G6C,LY6G6F,CCD1,EGT1,ICB
SE_01_003900182 chr6:31686072-31704371 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 182 2 386 40 6 104 1636 BAT5,CSNK2B,LY6G6F,LY6G5C,C6ORF47,LY6G6C,APOM,DDAH2,LY6G6E,C6ORF25,GPANK1,BAT3,LY6G5B,MSH5,LY6G6D,CLIC1,ABHD16A,AIF1,APO,ATP6V1G2,BAG6,C2,C6orf25,C6orf47,C6orf48,DDX39B,EHT2,HSPA1B,LS2,EGT1,SH5,SH5-SAPCD1,PRRC2A,VARS,VWA7,SAPCD1
Genomic distribution of SEs associated with AIF1
Genome Browser

The strength of the tissue affected by the gene

Expression of AIF1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)