SEdb 2.0
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Super-enhancer overview

SE ID: SE_00_004000135
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Spleen
Biosample name: spleen_30y
Genomic region: chr6:31540794-31593379
Size: 52585
Super-enhancer rank 135
Number of SE elements: 7
ChIP density(Case|Control): 60414.9065|7141.043
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LTA;
ROSE Overlap NFKBIL1; SNORD84; LTB; NCR3; LTA; LST1; ATP6V1G2; BAT1; TNF;
ROSE Proximal LST1; NFKBIL1; AIF1; SNORD117; MCCD1; BAT2; SNORA38; LTB; MICB;
ROSE Closest LTA;
Lasso AIF1; ATP6V1G2; ATP6V1G2-DDX39B; DDX39B; LST1; LTA; LTB; LY6G5B; LY6G5C; LY6G6C; LY6G6F; CCD1; EGT1; ICB; NCR3; NFKBIL1; TNF;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_004000135 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers