SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900182
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31686072-31704371
Size: 18299
Super-enhancer rank 182
Number of SE elements: 2
ChIP density(Case|Control): 46064.0727|5081.6323
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BAT5 ;
ROSE Overlap BAT5 ;
ROSE Proximal CSNK2B ; BAT5 ; LY6G6F ; LY6G5C ; C6orf47 ; LY6G6C ; APOM ; DDAH2 ; LY6G6E ; C6orf25 ; GPANK1 ; BAT3 ; LY6G5B ; MSH5 ; LY6G6D ; CLIC1 ;
ROSE Closest BAT5 ;
Lasso ABHD16A ; AIF1 ; APO ; ATP6V1G2 ; BAG6 ; C2 ; C6orf25 ; C6orf47 ; C6orf48 ; CLIC1 ; CSNK2B ; DDAH2 ; DDX39B ; EHT2 ; GPANK1 ; HSPA1B ; LS2 ; LY6G5C ; LY6G6C ; LY6G6F ; EGT1 ; SH5 ; SH5-SAPCD1 ; PRRC2A ; VARS ; VWA7 ;
PreSTIGE ABHD16A ; AIF1 ; BAG6 ; C6orf47 ; CLIC1 ; CSNK2B ; GPANK1 ; LY6G5B ; SH5 ; PRRC2A ; SAPCD1 ; VARS ; VWA7 ;
ABC MPIG6B ; DDAH2 ; MSH5-SAPCD1 ; CLIC1 ; LY6G6C ; MSH5 ; SAPCD1 ; SAPCD1-AS1 ; ABHD16A ; LY6G6F ; LY6G6E ; LY6G6D ;
BETA C6orf25 ; LY6G5B ; ABHD16A ; CLIC1 ; BAG6 ; DDAH2 ; SAPCD1-AS1 ; APOM ; GPANK1 ; LY6G6C ; AIF1 ; MSH5 ; LY6G6E ; MIR4646 ; CSNK2B ; SNORA38 ; PRRC2A ; LY6G6F ; MSH5-SAPCD1 ; MIR6832 ; VWA7 ; LY6G6D ; LY6G5C ; SAPCD1 ; C6orf47 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900182 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers