SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900369
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31539216-31543653
Size: 4437
Super-enhancer rank 369
Number of SE elements: 1
ChIP density(Case|Control): 31504.9185|1094.6079
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD84 ;
ROSE Overlap SNORD84 ; BAT1 ;
ROSE Proximal LST1 ; SNORD117 ; MCCD1 ; NFKBIL1 ; LTA ; TNF ; NCR3 ; LTB ; ATP6V1G2 ; MICB ;
ROSE Closest SNORD84 ;
Lasso AIF1 ; APO ; BAG6 ; C6orf47 ; CSNK2B ; DDAH2 ; DXO ; FKBPL ; GPANK1 ; GPS3 ; HSPA1A ; HSPA1B ; HSPA1L ; LS2 ; LTA ; LTB ; ICB ; NCR3 ; NEU1 ; PRRC2A ; VWA7 ;
PreSTIGE ;
ABC ;
BETA LTB ; LST1 ; ATP6V1G2-DDX39B ; NFKBIL1 ; MICB ; HCG26 ; LTA ; NCR3 ; DDX39B ; AIF1 ; TNF ; ATP6V1G2 ; HCP5 ; SNORA38 ; MCCD1 ; SNORD117 ; PRRC2A ; SNORD84 ; MIR6832 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900369 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers