SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000265558
Gene: MIR3918 Gene type: miRNA
Strand: - External links:
Genomic region: chr6:158764661-158764753 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_011400010 chr6:158679038-158815772 Sample_01_0114 Colon HCT116_encode 10 70 4266 368 12 205 2281 EZR,SYTL3,MIR3918,OSTCP1,DYNLT1,EZR-AS1
SE_02_042600009 chr6:158685711-158820710 Sample_02_0426 Colon HCT116_NONT 9 8 4265 374 10 215 2632 EZR,SYTL3,MIR3918,OSTCL,DYNLT1
SE_02_014300025 chr6:158685797-158740127 Sample_02_0143 Colon HCT116_Parental 25 10 1621 120 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_014200016 chr6:158685950-158739704 Sample_02_0142 Colon HCT116_Homozygous_ARID1A-KO 16 9 1609 120 3 33 315 SYTL3,DYNLT1,MIR3918
SE_01_003400005 chr6:158685998-158820724 Sample_01_0034 Colon HCT116 5 14 4257 374 10 215 2633 EZR,SYTL3,MIR3918,OSTCL,DYNLT1
SE_02_042700039 chr6:158686010-158744622 Sample_02_0427 Colon HCT116_shPAF1 39 5 1744 130 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_035200004 chr6:158686048-158820845 Sample_02_0352 Colon HCT116 4 27 4261 374 10 215 2642 EZR,SYTL3,MIR3918,OSTCL,DYNLT1
SE_02_060700049 chr6:158686151-158739350 Sample_02_0607 Colon HCT116 TP53-/-_Nutlin-3A 49 17 1597 119 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_124700015 chr6:158686169-158742788 Sample_02_1247 Colon HCT116_IFN-beta_1h 15 13 1678 128 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_045800008 chr6:158686194-158743630 Sample_02_0458 Colon HCT116 DMSO 8 21 1704 128 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_104600498 chr6:158689918-158794353 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 498 31 3372 294 8 185 1933 EZR,SYTL3,MIR3918,DYNLT1,EZR-AS1
SE_02_103000166 chr6:158690884-158739144 Sample_02_1030 Colon DKO 166 28 1473 112 3 33 315 SYTL3,DYNLT1,MIR3918
SE_02_136500218 chr6:158691589-158739820 Sample_02_1365 Pancreas AsPC1-untreated 218 20 1467 111 3 31 315 SYTL3,DYNLT1,MIR3918
SE_02_088400838 chr6:158691630-158739960 Sample_02_0884 Colon LoVo 838 12 1468 111 3 31 315 SYTL3,DYNLT1,MIR3918
SE_02_152500052 chr6:158696785-158740781 Sample_02_1525 Stomach N87 DMSO 52 15 1342 104 3 31 315 SYTL3,MIR3918
SE_02_087400046 chr6:158701170-158741320 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 46 16 1209 94 2 31 315 SYTL3,MIR3918
SE_02_087300030 chr6:158701235-158744646 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 30 18 1307 101 2 31 315 SYTL3,MIR3918
SE_02_087200045 chr6:158701284-158742655 Sample_02_0872 Colon HCT116_siCtrl-5FU 45 21 1241 99 2 31 315 SYTL3,MIR3918
SE_02_137000051 chr6:158701944-158738648 Sample_02_1370 Pancreas Patu8902-untreated 51 14 1119 86 2 31 315 SYTL3,MIR3918
SE_02_061900020 chr6:158702369-158785708 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 20 27 2732 236 7 168 1841 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_043100523 chr6:158702980-158718435 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 523 3 493 33 0 22 270 SYTL3,MIR3918
SE_00_002001155 chr6:158703115-158721111 Sample_00_0020 Large intestine large-intestine_108d 1155 5 565 40 0 25 270 SYTL3,MIR3918
SE_01_005900232 chr6:158703131-158739998 Sample_01_0059 Lung PC-9 232 4 1115 84 2 31 315 SYTL3,MIR3918
SE_01_003700664 chr6:158703170-158731787 Sample_01_0037 Liver hepatocyte 664 4 865 68 1 29 315 SYTL3,MIR3918
SE_02_014100030 chr6:158703172-158739722 Sample_02_0141 Colon HCT116_Heterozygous_ARID1A-KO 30 6 1110 84 2 31 315 SYTL3,MIR3918
SE_02_094600024 chr6:158703196-158744269 Sample_02_0946 Tongue HN12 24 9 1224 92 2 31 315 SYTL3,MIR3918
SE_02_153900409 chr6:158703225-158739880 Sample_02_1539 Nasopharyngeal C666-1 409 19 1113 84 2 31 315 SYTL3,MIR3918
SE_02_047600574 chr6:158703338-158730696 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 574 8 816 64 1 29 315 SYTL3,MIR3918
SE_02_153700206 chr6:158703400-158721914 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 206 3 575 42 0 25 270 SYTL3,MIR3918
SE_02_113100223 chr6:158703449-158743220 Sample_02_1131 Pancreas T3M4 wt 223 19 1184 91 2 31 315 SYTL3,MIR3918
SE_02_070400298 chr6:158703553-158738539 Sample_02_0704 Pancreas HPAFII WT 298 15 1059 81 2 31 315 SYTL3,MIR3918
SE_02_072400413 chr6:158703576-158738930 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 413 11 1067 81 2 31 315 SYTL3,MIR3918
SE_02_071300461 chr6:158703578-158739384 Sample_02_0713 Pancreas BxPC3_sgTP63 461 15 1086 82 2 31 315 SYTL3,MIR3918
SE_02_075100621 chr6:158703585-158718995 Sample_02_0751 Lymphoma Rec-1_WO 621 4 483 31 0 23 270 SYTL3,MIR3918
SE_02_047900149 chr6:158703588-158815821 Sample_02_0479 Head and neck SCC25 149 83 3568 321 9 202 2244 EZR,SYTL3,MIR3918,EZR-AS1,OSTCP1
SE_02_105200068 chr6:158703643-158737731 Sample_02_1052 Esophagus JH-EsoAd1 68 14 1031 80 2 31 315 SYTL3,MIR3918
SE_02_028000456 chr6:158703664-158722539 Sample_02_0280 Mammary gland SUM159_DMSO_24h 456 2 578 43 0 25 270 SYTL3,MIR3918
SE_02_105400248 chr6:158703853-158743406 Sample_02_1054 Esophagus SKGT4 248 12 1179 91 2 31 315 SYTL3,MIR3918
SE_02_154000488 chr6:158703865-158760470 Sample_02_1540 Nasopharyngeal HK1 488 19 1712 140 4 69 540 SYTL3,MIR3918
SE_02_071700726 chr6:158703871-158738655 Sample_02_0717 Pancreas HPAFII_GFP_DOX 726 8 1051 81 2 31 315 SYTL3,MIR3918
SE_02_071201027 chr6:158703892-158738573 Sample_02_0712 Pancreas BxPC3_sgNEG 1027 13 1050 81 2 31 315 SYTL3,MIR3918
SE_02_153500116 chr6:158703895-158722444 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 116 4 572 43 0 25 270 SYTL3,MIR3918
SE_02_041500042 chr6:158703907-158746423 Sample_02_0415 Stomach YCC22 42 11 1269 98 4 46 342 SYTL3,MIR3918
SE_02_072000411 chr6:158703940-158739755 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 411 14 1085 83 2 31 315 SYTL3,MIR3918
SE_02_143500065 chr6:158703950-158761880 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 65 7 1787 146 4 70 630 SYTL3,MIR3918
SE_02_094800247 chr6:158704057-158760302 Sample_02_0948 Pharyng Detroit562 247 10 1701 140 4 69 537 SYTL3,MIR3918,EZR,DYNLT1
SE_02_094700298 chr6:158704147-158739265 Sample_02_0947 Tongue Cal27 298 5 1070 81 2 31 315 SYTL3,MIR3918
SE_02_143400075 chr6:158704210-158764623 Sample_02_1434 Trophoblast trophoblast stem cells 75 11 1897 157 5 87 821 SYTL3,MIR3918
SE_02_008000292 chr6:158704287-158738555 Sample_02_0080 Lung Calu-3 292 10 1040 81 2 31 315 SYTL3,MIR3918
SE_02_154100552 chr6:158704357-158744122 Sample_02_1541 Nasopharyngeal HNE1 552 13 1182 91 2 31 315 SYTL3,MIR3918
SE_02_028100344 chr6:158704382-158740638 Sample_02_0281 Bone U2OS 344 4 1090 84 2 29 315 SYTL3,MIR3918
SE_02_093500225 chr6:158704396-158725690 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 225 9 648 50 0 27 301 SYTL3,MIR3918,EZR,DYNLT1
SE_02_075000586 chr6:158704422-158719083 Sample_02_0750 Lymphoma Rec-1_GSI 586 4 460 31 0 21 270 SYTL3,MIR3918
SE_02_059900076 chr6:158704468-158739560 Sample_02_0599 Colon HCT116_DMSO 76 17 1062 83 2 29 315 SYTL3,MIR3918
SE_02_070800483 chr6:158704527-158737611 Sample_02_0708 Pancreas hF3 organoid 483 15 998 80 2 29 315 SYTL3,MIR3918
SE_02_075501363 chr6:158704547-158718667 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1363 2 443 31 0 20 270 SYTL3,MIR3918
SE_02_087000008 chr6:158704802-158744055 Sample_02_0870 Colon HCT116_GLIS2.1-DMSO 8 12 1160 91 2 28 315 SYTL3,MIR3918
SE_02_074400573 chr6:158704972-158716181 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 573 7 362 26 0 16 186 SYTL3,MIR3918
SE_01_002300432 chr6:158705095-158719769 Sample_01_0023 Embryo cardiac-muscle-cell 432 3 457 34 0 20 270 SYTL3,MIR3918
SE_02_074501208 chr6:158705577-158716190 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1208 5 344 26 0 16 186 SYTL3,MIR3918
SE_02_020100019 chr6:158705663-158739024 Sample_02_0201 Stomach MKN7 19 7 1000 80 2 28 315 SYTL3,MIR3918
SE_02_102900083 chr6:158717411-158732944 Sample_02_1029 Colon HCT116 83 1 446 42 1 8 129 SYTL3,MIR3918
SE_02_102900560 chr6:158733075-158740268 Sample_02_1029 Colon HCT116 560 1 214 11 1 2 0 SYTL3,MIR3918
SE_01_007900051 chr6:158736862-158820672 Sample_01_0079 Peyers patch Peyers-patch 51 11 2720 259 7 182 2313 EZR,SYTL3,MIR3918,OSTCL
SE_02_030300232 chr6:158736981-158771675 Sample_02_0303 Neuroblastoma LAN1 232 7 1220 105 3 91 1237 EZR,SYTL3,MIR3918
SE_02_030900116 chr6:158737345-158771214 Sample_02_0309 Neuroblastoma SJNB6 116 8 1187 102 3 88 1178 EZR,SYTL3,MIR3918
SE_02_031300348 chr6:158742439-158770988 Sample_02_0313 Neuroblastoma SK-N-DZ 348 7 1045 88 3 88 1134 EZR,SYTL3,MIR3918
SE_02_093500055 chr6:158742580-158816522 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 55 41 2431 232 7 171 1929 EZR,SYTL3,MIR3918,EZR-AS1,OSTCP1
SE_02_025400083 chr6:158742685-158774095 Sample_02_0254 Neuroblastoma IMR5-75 83 8 1147 99 3 96 1237 EZR,SYTL3,MIR3918
SE_02_025200074 chr6:158742741-158774746 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 74 3 1166 101 3 96 1237 EZR,SYTL3,MIR3918
SE_02_074000615 chr6:158742935-158774983 Sample_02_0740 Muscle RH3 615 11 1166 102 3 97 1237 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_031000192 chr6:158743539-158772511 Sample_02_0310 Neuroblastoma SJNB8 192 5 1074 97 3 91 1237 EZR,SYTL3,MIR3918
SE_02_030200174 chr6:158743733-158772604 Sample_02_0302 Neuroblastoma IMR32 174 5 1074 97 3 91 1237 EZR,SYTL3,MIR3918
SE_02_031500397 chr6:158743973-158770623 Sample_02_0315 Neuroblastoma TR14 397 7 989 87 3 84 1077 EZR,SYTL3,MIR3918
SE_02_106400667 chr6:158744452-158770520 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 667 10 967 85 3 84 1077 EZR,SYTL3,MIR3918,EZR-AS1
SE_01_002100605 chr6:158749816-158770713 Sample_01_0021 Skin bipolar-neuron 605 5 830 70 1 66 1067 EZR,SYTL3,MIR3918
SE_02_104800603 chr6:158751216-158801236 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 603 16 1755 172 4 139 1902 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_155300536 chr6:158752558-158799337 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 536 27 1664 162 4 131 1649 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_128200038 chr6:158753151-158771318 Sample_02_1282 Lung NCI-H1092_p8-15 38 10 767 66 1 63 1100 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_074300182 chr6:158757115-158775530 Sample_02_0743 Embryo ES derived mesoderm_day2 182 8 775 63 1 70 1103 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_101701457 chr6:158757879-158815894 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1457 19 1958 187 5 133 1707 EZR,SYTL3,MIR3918,EZR-AS1,OSTCP1
SE_02_113100784 chr6:158759597-158785157 Sample_02_1131 Pancreas T3M4 wt 784 15 983 92 3 93 1213 EZR,SYTL3,MIR3918,EZR-AS1
SE_02_042700253 chr6:158759873-158820676 Sample_02_0427 Colon HCT116_shPAF1 253 10 2044 197 5 144 2092 EZR,SYTL3,MIR3918,OSTCL
SE_02_021600589 chr6:158759992-158786134 Sample_02_0216 Skin NHEK_scramble 589 7 998 93 3 99 1310 EZR,SYTL3,MIR3918
SE_02_080800329 chr6:158760683-158816262 Sample_02_0808 Ovary RMG1_ARID1A KO 329 46 1853 183 5 132 1657 EZR,SYTL3,MIR3918,EZR-AS1,OSTCP1
SE_02_151000204 chr6:158760766-158815826 Sample_02_1510 Lung H3122_LR_Pano 204 47 1834 181 5 132 1642 EZR,SYTL3,MIR3918,EZR-AS1,OSTCP1
SE_02_002100791 chr6:158770986-158782580 Sample_02_0021 Colon V429 791 2 382 44 2 22 152 EZR,MIR3918
Genomic distribution of SEs associated with MIR3918
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR3918

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)