SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_042700253
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr6:158759873-158820676
Size: 60803
Super-enhancer rank 253
Number of SE elements: 10
ChIP density(Case|Control): 82631.277|8907.6395
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3918 ;
ROSE Overlap EZR ; SYTL3 ; MIR3918 ;
ROSE Proximal OSTCL ;
ROSE Closest MIR3918 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C6orf99 ; EZR ; OSTCP1 ; MIR3918 ; EZR-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700253 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers