SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: LOC100130075 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_093000357 chr12:68760053-68833113 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 357 31 1859 143 3 31 806 MDM2,LOC100130075,SLC35E3,NUP107,AC124890.1
SE_01_009600632 chr12:68761915-68793721 Sample_01_0096 B-cell lymphoma DOHH2 632 11 791 61 2 6 165 SLC35E3,MDM2,LOC100130075
SE_02_088500204 chr12:68768335-68810032 Sample_02_0885 Blood NALM6_2 204 8 1056 81 3 19 442 MDM2,LOC100130075,SLC35E3
SE_02_073900419 chr12:68769333-68814275 Sample_02_0739 Blood Nalm6 419 14 1139 81 2 19 473 MDM2,LOC100130075,SLC35E3
SE_02_109700072 chr12:68769916-68815471 Sample_02_1097 Haematopoietic and lymphoid tissue 697 72 29 1158 83 2 24 515 MDM2,LOC100130075,SLC35E3
SE_02_057300491 chr12:68769917-68809639 Sample_02_0573 Blood Nalm6_1 491 6 998 71 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_143500409 chr12:68771407-68812636 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 409 7 1043 74 2 19 442 MDM2,LOC100130075,SLC35E3
SE_02_156901205 chr12:68772208-68839363 Sample_02_1569 Endothelial Endothelial cells 1205 15 1700 132 2 30 740 MDM2,LOC100130075,SLC35E3
SE_02_044700116 chr12:68775998-68789087 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 116 7 311 24 1 1 0 MDM2,LOC100130075,SLC35E3
SE_02_076300196 chr12:68777497-68824639 Sample_02_0763 Podocyte podocyte_DEX 196 12 1201 88 2 25 603 MDM2,LOC100130075,SLC35E3
SE_02_059700275 chr12:68780166-68811649 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 275 7 793 61 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_109200189 chr12:68780471-68812746 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 189 7 821 62 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_123400269 chr12:68780480-68809589 Sample_02_1234 Mammary gland T47D_Full 269 11 736 54 2 17 442 MDM2,LOC100130075,SLC35E3
SE_02_113100341 chr12:68780510-68812026 Sample_02_1131 Pancreas T3M4 wt 341 11 799 61 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_109300181 chr12:68780636-68815219 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 181 12 879 66 2 21 515 MDM2,LOC100130075,SLC35E3
SE_02_060300160 chr12:68780774-68811774 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 160 9 784 60 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_109100185 chr12:68780802-68809790 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 185 6 734 56 2 17 442 MDM2,LOC100130075,SLC35E3
SE_02_108700320 chr12:68780868-68812062 Sample_02_1087 Mammary gland T47D_shCtrl_shRING1B_0 320 9 791 61 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_049900636 chr12:68780911-68825911 Sample_02_0499 Fetal lung IMR90 IR Senescence 636 11 1153 87 2 25 611 MDM2,LOC100130075,SLC35E3
SE_02_053200144 chr12:68781213-68813217 Sample_02_0532 Mammary gland T47D 144 7 816 61 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_109000206 chr12:68781247-68813369 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 206 7 821 60 2 18 442 MDM2,LOC100130075,SLC35E3
SE_02_108800328 chr12:68781252-68809775 Sample_02_1088 Mammary gland T47D_shCtrl_45min 328 6 722 54 2 17 442 MDM2,LOC100130075,SLC35E3
SE_02_146500189 chr12:68781362-68819774 Sample_02_1465 Ovary CAOV4cis 189 8 978 73 2 24 548 MDM2,LOC100130075,SLC35E3
SE_02_108600225 chr12:68781376-68809792 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 225 6 721 54 2 17 442 MDM2,LOC100130075,SLC35E3
SE_02_064502346 chr12:68781423-68795512 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2346 6 348 27 1 1 0 MDM2,LOC100130075,SLC35E3
SE_02_108900251 chr12:68781441-68809801 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 251 5 721 54 2 17 442 MDM2,LOC100130075,SLC35E3
SE_02_125400215 chr12:68784821-68827197 Sample_02_1254 Bladder Bladder tumor Basal1 215 16 1094 80 1 25 611 MDM2,LOC100130075,SLC35E3
SE_02_053000346 chr12:68784850-68827956 Sample_02_0530 Mammary gland MCF10A 346 21 1114 82 1 25 611 MDM2,LOC100130075,SLC35E3
SE_02_079100082 chr12:68785049-68788166 Sample_02_0791 Brain 2455 82 4 71 8 0 1 0 MDM2,LOC100130075,SLC35E3
SE_02_061100101 chr12:68785148-68795112 Sample_02_0611 Liposarcoma DDLPS_T1 101 9 254 17 0 1 0 MDM2,LOC100130075,SLC35E3
SE_02_060900001 chr12:68785194-68811990 Sample_02_0609 Liposarcoma LPS141 1 7 689 49 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_072700434 chr12:68785270-68811976 Sample_02_0727 Fetal lung IMR90_Etoposide 434 6 687 49 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_079700002 chr12:68785280-68812747 Sample_02_0797 Brain PNMNK1 2 7 710 50 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_106700131 chr12:68786165-68811245 Sample_02_1067 Bone SJSA-1 131 5 645 43 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_113200585 chr12:68786221-68811027 Sample_02_1132 Pancreas KLM1 wt 585 5 638 43 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_088401075 chr12:68786590-68812001 Sample_02_0884 Colon LoVo 1075 5 661 47 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_081900713 chr12:68786683-68812026 Sample_02_0819 Ovary Mucinous ovarian cancer 713 4 660 47 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_121900308 chr12:68786727-68825072 Sample_02_1219 Bone marrow H929 308 12 996 71 1 25 611 MDM2,LOC100130075,SLC35E3
SE_02_107600245 chr12:68786753-68811140 Sample_02_1076 Mammary gland MCF7_TET2WT-E2 245 6 636 43 1 18 442 MDM2,LOC100130075,SLC35E3,NUP107
SE_02_080900264 chr12:68786896-68813558 Sample_02_0809 Mammary gland T47D Serum 264 6 707 49 1 18 460 MDM2,LOC100130075,SLC35E3
SE_02_125800793 chr12:68787169-68812054 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 793 5 647 46 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_070300622 chr12:68787179-68810366 Sample_02_0703 Pancreas PATU8988S WT 622 4 601 41 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_062300197 chr12:68787258-68811105 Sample_02_0623 Mammary gland TAMR_E2 197 6 621 42 1 18 442 MDM2,LOC100130075,SLC35E3
SE_02_052700279 chr12:68787265-68811108 Sample_02_0527 Mammary gland MCF7_WT 279 9 621 42 1 18 442 MDM2,LOC100130075,SLC35E3,NUP107
SE_02_107700298 chr12:68787279-68810494 Sample_02_1077 Mammary gland MCF7_TET2KO-E2 298 4 603 42 1 18 442 MDM2,LOC100130075,SLC35E3,NUP107
SE_02_076700557 chr12:68787351-68823645 Sample_02_0767 Ovary OVCA429 557 12 929 69 1 24 563 MDM2,LOC100130075,SLC35E3
SE_02_071101010 chr12:68787579-68811607 Sample_02_0711 Pancreas hN35_organoid 1010 7 624 43 1 17 442 MDM2,LOC100130075,SLC35E3
SE_02_137100499 chr12:68787612-68810342 Sample_02_1371 Pancreas Patu899S-untreated 499 6 590 39 1 17 442 MDM2,LOC100130075,SLC35E3
SE_02_081000233 chr12:68787851-68812072 Sample_02_0810 Mammary gland T47D noSerum 233 7 632 43 1 17 442 MDM2,LOC100130075,SLC35E3
SE_02_062400272 chr12:68792267-68810590 Sample_02_0624 Mammary gland TAMR_VEH 272 5 475 33 1 17 442 MDM2,LOC100130075,SLC35E3
SE_02_055300396 chr12:68803051-68810362 Sample_02_0553 Other HSSY2 shCt 396 2 184 17 1 17 442 MDM2,LOC100130075
Genomic distribution of SEs associated with LOC100130075
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100130075

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)