SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: CLLU1OS Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_078400003 chr12:92397536-92521056 Sample_02_0784 Blood OSU-CLL 3 18 3530 229 17 343 902 CLLU1,CLLU1OS
SE_01_003000006 chr12:92398463-92507370 Sample_01_0030 Haematopoietic and lymphoid tissue blood GM12878 6 12 3115 217 16 322 902 CLLU1,CLLU1OS,BTG1
SE_02_032000007 chr12:92399611-92520691 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 7 11 3468 227 17 335 902 CLLU1,CLLU1OS
SE_02_032100009 chr12:92399735-92507766 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 9 12 3089 215 16 314 902 CLLU1,CLLU1OS
SE_02_152200658 chr12:92422424-92446056 Sample_02_1522 Skin A375 RTKi 658 6 713 64 6 66 445 CLLU1,CLLU1OS
SE_02_018000531 chr12:92422853-92446651 Sample_02_0180 melanoma CJM 531 4 715 63 6 66 413 CLLU1,CLLU1OS
SE_02_152100423 chr12:92422927-92446309 Sample_02_1521 Skin A375 DMSO 423 4 700 63 6 66 413 CLLU1,CLLU1OS
SE_02_149300386 chr12:92423675-92446059 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 386 6 680 61 6 64 413 CLLU1,CLLU1OS
SE_02_018100792 chr12:92425678-92446327 Sample_02_0181 melanoma COLO679 792 4 628 56 4 56 288 CLLU1,CLLU1OS
SE_01_002000031 chr12:92428883-92508703 Sample_01_0020 Blood B-cell 31 6 2205 146 10 244 499 CLLU1,CLLU1OS
SE_02_014600108 chr12:92430029-92474468 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 108 4 1271 99 8 140 169 CLLU1,CLLU1OS
SE_02_073300026 chr12:92430139-92507066 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 26 16 2128 142 10 234 373 CLLU1,CLLU1OS
SE_02_072800020 chr12:92430172-92507259 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 20 11 2137 143 10 234 372 CLLU1,CLLU1OS
SE_02_073200028 chr12:92430268-92507312 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 28 20 2135 143 10 236 365 CLLU1,CLLU1OS
SE_02_073500048 chr12:92430579-92506977 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 48 14 2110 141 10 233 338 CLLU1,CLLU1OS
SE_02_099900096 chr12:92430604-92506817 Sample_02_0999 Lymphoma OCI-LY1_966 96 39 2108 141 10 232 333 CLLU1,CLLU1OS
SE_02_038700019 chr12:92430619-92511769 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 19 42 2254 147 11 239 333 CLLU1,CLLU1OS
SE_02_073400048 chr12:92431044-92506739 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 48 14 2089 137 7 232 300 CLLU1OS,CLLU1
SE_02_142900099 chr12:92431074-92507272 Sample_02_1429 Blood GM12878_WT 99 14 2105 138 7 236 298 CLLU1OS,CLLU1
SE_02_078300022 chr12:92431087-92507028 Sample_02_0783 Blood MEC2 22 12 2094 137 7 234 298 CLLU1OS,CLLU1
SE_02_012200020 chr12:92431087-92508126 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 20 7 2127 138 7 236 298 CLLU1OS,CLLU1
SE_02_078200010 chr12:92431109-92507330 Sample_02_0782 Blood MEC1 10 10 2104 138 7 236 297 CLLU1OS,CLLU1
SE_02_077900273 chr12:92431135-92488994 Sample_02_0779 Lymphoma U2932 273 18 1607 108 6 169 293 CLLU1OS,CLLU1
SE_01_005300129 chr12:92431140-92507052 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 129 8 2092 137 7 234 293 CLLU1OS,CLLU1
SE_02_078100678 chr12:92431150-92487294 Sample_02_0781 Lymphoma Pfeiffer_DMSO 678 15 1567 107 6 169 293 CLLU1OS,CLLU1
SE_02_075000074 chr12:92431171-92489944 Sample_02_0750 Lymphoma Rec-1_GSI 74 20 1629 109 6 169 290 CLLU1OS,CLLU1
SE_02_075100092 chr12:92431187-92490020 Sample_02_0751 Lymphoma Rec-1_WO 92 19 1632 109 6 169 288 CLLU1OS,CLLU1
SE_02_099800092 chr12:92431189-92507299 Sample_02_0998 Lymphoma OCI-LY1_DMSO 92 50 2102 138 7 236 288 CLLU1OS,CLLU1
SE_02_073600113 chr12:92431248-92471134 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 113 18 1129 91 5 105 77 CLLU1OS,CLLU1
SE_02_011800012 chr12:92431335-92507065 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 12 6 2087 137 7 234 288 CLLU1OS,CLLU1
SE_02_010300538 chr12:92431339-92458973 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 538 5 794 61 1 71 0 CLLU1OS,CLLU1
SE_02_073000024 chr12:92431429-92507087 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 24 11 2083 137 7 234 288 CLLU1OS,CLLU1
SE_00_000500024 chr12:92431577-92507694 Sample_00_0005 Blood B-cell 24 8 2096 138 7 236 288 CLLU1OS,CLLU1
SE_02_021300190 chr12:92431740-92487941 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 190 5 1558 107 6 169 288 CLLU1OS,CLLU1
SE_02_057300282 chr12:92431780-92468911 Sample_02_0573 Blood Nalm6_1 282 10 1048 85 4 100 77 CLLU1OS,CLLU1
SE_02_002500016 chr12:92431792-92506961 Sample_02_0025 Blood CD19donorA 16 24 2069 137 7 233 288 CLLU1OS,CLLU1
SE_02_061200443 chr12:92432013-92479299 Sample_02_0612 Liposarcoma DDLPS_T2 443 22 1325 97 6 147 77 CLLU1OS,CLLU1
SE_02_073100032 chr12:92432090-92489976 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 32 8 1604 109 6 169 288 CLLU1OS,CLLU1
SE_02_012000018 chr12:92432158-92506659 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 18 7 2058 137 7 232 288 CLLU1OS,CLLU1
SE_02_135000503 chr12:92432274-92473786 Sample_02_1350 Leukophereses leukophereses_p456 503 18 1180 94 5 124 77 CLLU1OS,CLLU1
SE_02_072900058 chr12:92432516-92507183 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 58 14 2064 138 7 234 288 CLLU1OS,CLLU1
SE_02_028800245 chr12:92432614-92448048 Sample_02_0288 Tonsil CB5_H3K27Ac 245 4 462 35 1 48 0 CLLU1OS,CLLU1
SE_02_073700037 chr12:92432812-92507406 Sample_02_0737 Blood Pt17_leukemia cell_THZ1 37 19 2057 136 7 236 288 CLLU1OS,CLLU1
SE_01_005500539 chr12:92433687-92448174 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 539 2 427 29 1 48 0 CLLU1OS,CLLU1
SE_02_073900593 chr12:92433884-92489083 Sample_02_0739 Blood Nalm6 593 15 1522 100 6 169 288 CLLU1OS,CLLU1
SE_02_012100281 chr12:92433985-92472707 Sample_02_0121 Haematopoietic and lymphoid tissue SUDHL-4 281 4 1091 84 5 111 77 CLLU1OS,CLLU1
SE_02_088500512 chr12:92434177-92479375 Sample_02_0885 Blood NALM6_2 512 7 1269 90 6 147 77 CLLU1OS,CLLU1
SE_00_002700852 chr12:92436388-92472323 Sample_00_0027 Blood natural-killer-cell 852 5 1018 80 5 107 77 CLLU1OS,CLLU1
SE_02_074000852 chr12:92438692-92471020 Sample_02_0740 Muscle RH3 852 10 895 73 5 93 77 CLLU1OS,CLLU1
SE_02_087600444 chr12:92441242-92473103 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 444 14 861 67 4 99 77 CLLU1OS,CLLU1
SE_01_006700245 chr12:92442842-92506528 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 245 6 1716 108 6 210 288 CLLU1OS,CLLU1
SE_02_141300576 chr12:92442975-92471078 Sample_02_1413 Muscle RH4_sgBRG1 576 6 761 62 4 83 77 CLLU1OS,CLLU1
SE_01_009600583 chr12:92460962-92472796 Sample_01_0096 B-cell lymphoma DOHH2 583 3 333 31 4 41 77 CLLU1OS,CLLU1
SE_01_005500235 chr12:92460989-92489729 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 235 3 780 47 5 98 288 CLLU1OS,CLLU1
SE_01_005400263 chr12:92461278-92506827 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 263 7 1232 75 6 161 288 CLLU1OS,CLLU1
SE_02_108100471 chr12:92461280-92471075 Sample_02_1081 Muscle CTR shCtrl 471 9 271 29 4 34 77 CLLU1OS,CLLU1
SE_02_139300641 chr12:92461295-92480929 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 641 7 537 38 5 76 77 CLLU1OS,CLLU1
SE_02_012300084 chr12:92461453-92507359 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 84 5 1234 75 6 165 288 CLLU1OS,CLLU1
SE_02_109700254 chr12:92461484-92544661 Sample_02_1097 Haematopoietic and lymphoid tissue 697 254 34 2391 132 7 242 288 CLLU1OS,CLLU1
SE_02_122400858 chr12:92461833-92506484 Sample_02_1224 Bone marrow normal plasma cell 858 18 1204 74 6 161 288 CLLU1OS,CLLU1
SE_02_154600117 chr12:92465179-92506670 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 117 15 1125 69 6 154 288 CLLU1OS,CLLU1
SE_02_012700516 chr12:92485209-92521339 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 516 6 1003 43 2 96 0 CLLU1OS
SE_02_013100473 chr12:92485209-92521339 Sample_02_0131 Lung 1015_PT 473 6 1003 43 2 96 0 CLLU1OS
SE_02_050200016 chr12:92493048-92611890 Sample_02_0502 Blood HL-60_PMA_16h 16 66 3433 141 3 299 0 CLLU1OS
SE_02_074000450 chr12:92493060-92508422 Sample_02_0740 Muscle RH3 450 4 397 22 1 66 0 CLLU1OS
SE_02_010100586 chr12:92493095-92517144 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 586 3 648 32 2 73 0 CLLU1OS
SE_02_010300581 chr12:92501793-92520794 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 581 3 514 15 1 61 0 CLLU1OS
SE_02_157300383 chr12:92501896-92570259 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 383 18 1967 89 1 178 0 CLLU1OS
SE_02_135000803 chr12:92502337-92514001 Sample_02_1350 Leukophereses leukophereses_p456 803 6 315 10 1 47 0 CLLU1OS
SE_02_156100234 chr12:92503146-92507010 Sample_02_1561 Gastrointestinal Stromal GIST-10_PDGFRA e1 234 5 81 1 0 36 0 CLLU1OS
SE_02_082600232 chr12:92504281-92577170 Sample_02_0826 Stomach gastric tumor 232 41 2127 92 1 173 0 CLLU1OS
SE_02_066100635 chr12:92506333-92574762 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 635 21 1997 89 1 150 0 CLLU1OS
SE_04_001000142 chr12:92515336-92625043 Sample_04_0010 Lung A549 TGFb 142 14 3188 129 2 260 0 C12ORF74,CLLU1OS
SE_02_142900260 chr12:92520488-92570226 Sample_02_1429 Blood GM12878_WT 260 15 1460 74 0 118 0 CLLU1OS,C12orf74,CLLU1
SE_00_002700749 chr12:92523660-92570573 Sample_00_0027 Blood natural-killer-cell 749 5 1370 70 0 117 0 CLLU1OS
SE_02_023200716 chr12:92523783-92570504 Sample_02_0232 Tonsil ILC3 716 8 1364 70 0 115 0 CLLU1OS
SE_02_014600199 chr12:92528619-92571032 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 199 17 1231 65 0 116 0 CLLU1OS
SE_02_032100576 chr12:92529249-92595368 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 576 7 1972 77 1 168 0 CLLU1OS
SE_02_078300388 chr12:92529591-92571064 Sample_02_0783 Blood MEC2 388 9 1197 62 0 116 0 CLLU1OS
SE_02_158100076 chr12:92530384-92575748 Sample_02_1581 Renal OS-LM1 76 13 1328 63 0 121 0 CLLU1OS
SE_02_088500781 chr12:92533392-92569376 Sample_02_0885 Blood NALM6_2 781 9 1049 57 0 112 0 CLLU1OS
SE_02_073900692 chr12:92533621-92594779 Sample_02_0739 Blood Nalm6 692 13 1802 73 1 168 0 CLLU1OS
SE_02_078200360 chr12:92533674-92595620 Sample_02_0782 Blood MEC1 360 11 1835 73 1 168 0 CLLU1OS
SE_02_154600064 chr12:92533875-92582406 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 64 20 1396 63 0 125 0 CLLU1OS
SE_02_078400035 chr12:92534029-92571244 Sample_02_0784 Blood OSU-CLL 35 12 1057 58 0 116 0 CLLU1OS
SE_02_012700589 chr12:92534456-92575786 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 589 14 1195 59 0 119 0 CLLU1OS
SE_02_013100541 chr12:92534456-92575786 Sample_02_0131 Lung 1015_PT 541 14 1195 59 0 119 0 CLLU1OS
SE_02_049200736 chr12:92535278-92570484 Sample_02_0492 Pharyng Detroit 562_LPS 736 14 1001 56 0 108 0 CLLU1OS
SE_02_152100398 chr12:92535623-92573547 Sample_02_1521 Skin A375 DMSO 398 8 1081 57 0 112 0 CLLU1OS
SE_02_018000517 chr12:92535646-92573897 Sample_02_0180 melanoma CJM 517 9 1094 57 0 112 0 CLLU1OS
SE_02_077100475 chr12:92535968-92576326 Sample_02_0771 Ovary OVCA429_shGRHL2 475 16 1169 61 0 115 0 CLLU1OS
SE_02_048101717 chr12:92536312-92569863 Sample_02_0481 Mammary gland MDA-MB231 1717 9 974 56 0 106 0 CLLU1OS
SE_02_145800052 chr12:92536738-92609074 Sample_02_1458 Pancreas THP1+PANC1_shNC 52 28 2125 87 1 197 0 C12ORF74,CLLU1OS
SE_02_010100142 chr12:92537070-92608978 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 142 8 2115 87 1 197 0 C12ORF74,CLLU1OS
SE_02_012200506 chr12:92537215-92572107 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 506 4 1012 57 0 108 0 CLLU1OS
SE_01_003000063 chr12:92537223-92570640 Sample_01_0030 Haematopoietic and lymphoid tissue blood GM12878 63 5 962 57 0 107 0 CLLU1OS,C12orf74,CLLU1
SE_02_140200069 chr12:92537387-92556446 Sample_02_1402 Blood MM.1S_GNE-781 69 6 576 39 0 68 0 CLLU1OS
SE_02_045700308 chr12:92537462-92562471 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 308 5 744 49 0 77 0 CLLU1OS
SE_02_010300033 chr12:92537468-92609020 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 33 8 2107 86 1 197 0 C12ORF74,CLLU1OS
SE_02_042300572 chr12:92537580-92574724 Sample_02_0423 Skin A375 572 10 1077 56 0 109 0 CLLU1OS
SE_02_135400929 chr12:92537719-92574959 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 929 7 1082 56 0 109 0 CLLU1OS
SE_02_098901105 chr12:92537815-92575513 Sample_02_0989 Kidney kidney cortex_WT 1105 15 1097 55 0 109 0 CLLU1OS
SE_02_077502379 chr12:92537926-92555773 Sample_02_0775 Pancreas EndoC-BH1_SE 2379 9 549 35 0 64 0 CLLU1OS,C12orf74
SE_02_094800322 chr12:92538177-92570402 Sample_02_0948 Pharyng Detroit562 322 6 934 53 0 101 0 CLLU1OS
SE_02_157900487 chr12:92538512-92575586 Sample_02_1579 Renal 786-M1A 487 10 1086 55 0 107 0 CLLU1OS
SE_01_010100749 chr12:92538545-92573960 Sample_01_0101 Pancreas pancreas_54y 749 11 1029 54 0 103 0 CLLU1OS,C12orf74
SE_02_122401019 chr12:92538554-92562034 Sample_02_1224 Bone marrow normal plasma cell 1019 10 706 43 0 71 0 CLLU1OS
SE_02_149500170 chr12:92538619-92554843 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 170 8 505 34 0 62 0 CLLU1OS
SE_02_080800704 chr12:92538652-92569468 Sample_02_0808 Ovary RMG1_ARID1A KO 704 29 907 53 0 98 0 CLLU1OS
SE_02_158200103 chr12:92538700-92575827 Sample_02_1582 Renal OS-RC-2 103 15 1083 55 0 107 0 CLLU1OS
SE_01_010300399 chr12:92538730-92573863 Sample_01_0103 Pancreas pancreas_37y 399 13 1018 54 0 103 0 CLLU1OS,C12orf74
SE_02_045400417 chr12:92540342-92608595 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 417 23 2007 82 1 164 0 C12ORF74,CLLU1OS
SE_02_049500567 chr12:92542984-92569979 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 567 5 745 34 0 70 0 CLLU1OS
SE_02_049300784 chr12:92543110-92558832 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 784 3 425 20 0 37 0 CLLU1OS
SE_02_042900427 chr12:92549770-92575143 Sample_02_0429 Kidney 12364284_VHL+ 427 10 686 23 0 51 0 CLLU1OS
SE_02_047000018 chr12:92553125-92558933 Sample_02_0470 Blood GM12878 18 2 157 5 0 3 0 CLLU1OS,C12orf74
Genomic distribution of SEs associated with CLLU1OS
Genome Browser

The strength of the tissue affected by the gene

Expression of CLLU1OS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)