Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000137285
Gene: TUBB2B Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:3224277-3231730 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_001000943 chr6:3192974-3197104 Sample_00_0010 Embryo endodermal-cell 943 1 107 11 0 22 69 TUBB2B,TUBB2A
SE_02_096500142 chr6:3193036-3251349 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 142 14 1517 94 1 214 789 LOC100507194,TUBB2B,TUBB2A,PSMG4
SE_02_095300091 chr6:3193093-3251587 Sample_02_0953 Brain H3.3K27M_1840 91 13 1523 98 2 214 789 LOC100507194,TUBB2B,TUBB2A,PSMG4
SE_02_141000220 chr6:3193162-3251888 Sample_02_1410 Brain GSC6 220 11 1527 100 2 215 789 LOC100507194,TUBB2B,TUBB2A,PSMG4
SE_02_068700299 chr6:3208284-3234072 Sample_02_0687 Lung NCI-H146_no infection 299 6 658 34 0 147 720 TUBB2B,PSMG4,LOC100507194
SE_02_120500965 chr6:3208494-3251809 Sample_02_1205 Brain NB3 965 11 1120 61 2 168 720 TUBB2B,PSMG4,LOC100507194
SE_02_096700221 chr6:3208538-3261286 Sample_02_0967 Brain H3.3K27M_JN57 221 12 1755 168 3 179 906 PSMG4,TUBB2B,LOC100507194
SE_02_144300268 chr6:3208627-3232570 Sample_02_1443 Lung H69M 268 5 602 31 0 147 720 TUBB2B,PSMG4,LOC100507194
SE_02_119800067 chr6:3208680-3261070 Sample_02_1198 Brain GBM34 67 17 1742 166 3 179 906 PSMG4,TUBB2B,LOC100507194
SE_02_069300149 chr6:3209008-3234785 Sample_02_0693 Lung NCI-H69_no infection 149 10 662 34 0 147 720 TUBB2B,PSMG4,LOC100507194
SE_02_095400143 chr6:3209978-3251716 Sample_02_0954 Brain H3.3K27WT_2192 143 9 1085 58 2 158 720 TUBB2B,PSMG4,LOC100507194
SE_02_119600205 chr6:3210943-3252191 Sample_02_1196 Brain GBM32 205 10 1077 61 2 158 720 TUBB2B,PSMG4,LOC100507194
SE_02_097900260 chr6:3211072-3252139 Sample_02_0979 Brain JN14-BS1_H3.3K27M 260 14 1071 59 2 158 720 TUBB2B,PSMG4,LOC100507194
SE_02_118400096 chr6:3211104-3251584 Sample_02_1184 Brain GBM13 96 11 1052 52 2 157 720 TUBB2B,PSMG4,LOC100507194
SE_02_097700136 chr6:3211106-3251541 Sample_02_0977 Brain 2089_H3.3K27WT 136 11 1051 51 2 157 720 TUBB2B,PSMG4,LOC100507194
SE_02_085700181 chr6:3211109-3251399 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 181 9 1045 49 1 157 720 TUBB2B,PSMG4,LOC100507194
SE_02_117800321 chr6:3211111-3252200 Sample_02_1178 Brain GBM07 321 9 1073 59 2 158 720 TUBB2B,PSMG4,LOC100507194
SE_02_119700132 chr6:3211171-3261200 Sample_02_1197 Brain GBM33 132 9 1691 160 3 169 906 PSMG4,TUBB2B,LOC100507194
SE_02_119300114 chr6:3211176-3252120 Sample_02_1193 Brain GBM27 114 10 1071 59 2 158 720 TUBB2B,PSMG4,LOC100507194
SE_02_121200047 chr6:3211188-3261558 Sample_02_1212 Brain GBM30 47 14 1703 163 3 169 906 PSMG4,TUBB2B,LOC100507194
SE_02_097300024 chr6:3211950-3261758 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 24 10 1688 168 3 168 906 PSMG4,TUBB2B,LOC100507194
SE_02_123700589 chr6:3220707-3232826 Sample_02_1237 Skin MKL2_virus_positive 589 5 272 16 0 132 720 TUBB2B,PSMG4,LOC100507194
SE_02_068600081 chr6:3221124-3232698 Sample_02_0686 Lung NCI-H128_no infection 81 5 256 15 0 131 720 TUBB2B,PSMG4,LOC100507194
SE_02_128300241 chr6:3221577-3232769 Sample_02_1283 Lung NCI-H2107_p8-15 241 4 244 15 0 131 720 TUBB2B,PSMG4,LOC100507194
SE_01_005000024 chr6:3222813-3252198 Sample_01_0050 Embryo neural-cell 24 4 742 47 2 144 720 TUBB2B,PSMG4
SE_02_129100209 chr6:3222926-3232697 Sample_02_1291 Lung NCI-H889_p8-15 209 5 213 13 0 123 720 TUBB2B,PSMG4,LOC100507194
SE_02_069500266 chr6:3223122-3232924 Sample_02_0695 Lung NCI-H889_no infection 266 6 218 13 0 123 720 TUBB2B,PSMG4,LOC100507194
SE_02_096200188 chr6:3224386-3262220 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 188 9 1369 156 3 154 885 PSMG4,TUBB2B,LOC100507194
SE_02_117700191 chr6:3224455-3234823 Sample_02_1177 Brain GBM05 191 1 240 12 0 122 695 TUBB2B,PSMG4,LOC100507194
SE_02_095800117 chr6:3224468-3234822 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 117 1 240 12 0 122 694 TUBB2B,PSMG4,LOC100507194
SE_02_097100244 chr6:3224561-3235739 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 244 1 266 14 0 121 691 TUBB2B,PSMG4,LOC100507194
SE_02_110200231 chr6:3224650-3261915 Sample_02_1102 Brain LA-N-5 231 9 1342 154 3 153 871 PSMG4,TUBB2B,LOC100507194
SE_02_124600318 chr6:3224664-3232864 Sample_02_1246 Brain LAN5_ATRA 318 3 173 9 0 120 682 TUBB2B,PSMG4,LOC100507194
SE_02_062800085 chr6:3224802-3232203 Sample_02_0628 Brain CHP-134 85 4 154 9 0 118 641 TUBB2B,PSMG4,LOC100507194
SE_02_110600464 chr6:3224863-3232727 Sample_02_1106 Brain NGP 464 3 167 9 0 117 634 TUBB2B,PSMG4,LOC100507194
SE_02_118800105 chr6:3225130-3252293 Sample_02_1188 Brain GBM18 105 6 692 43 2 130 590 TUBB2B,PSMG4,LOC100507194
SE_02_123500142 chr6:3225188-3253201 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 142 12 736 48 2 128 575 TUBB2B,PSMG4,LOC100507194
SE_02_096300230 chr6:3225202-3233488 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 230 1 196 11 0 107 573 TUBB2B,PSMG4,LOC100507194
SE_02_118000128 chr6:3225260-3251284 Sample_02_1180 Brain GBM09 128 9 659 32 1 127 559 TUBB2B,PSMG4,LOC100507194
SE_02_110900546 chr6:3225301-3233035 Sample_02_1109 Brain SK-N-FI 546 2 184 10 0 105 550 TUBB2B,PSMG4,LOC100507194
SE_02_117900134 chr6:3225458-3233836 Sample_02_1179 Brain GBM08 134 1 201 10 0 94 514 TUBB2B,PSMG4,LOC100507194
SE_02_118900023 chr6:3225472-3251560 Sample_02_1189 Brain GBM22 23 9 667 35 2 113 513 TUBB2B,PSMG4,LOC100507194
SE_02_097000389 chr6:3225592-3233735 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 389 1 199 10 0 88 490 TUBB2B,PSMG4,LOC100507194
SE_02_096800167 chr6:3225593-3233083 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 167 1 183 9 0 88 490 TUBB2B,PSMG4,LOC100507194
SE_02_029900136 chr6:3225633-3251839 Sample_02_0299 Neuroblastoma CLB-MA 136 3 673 37 2 109 484 TUBB2B,PSMG4
SE_00_003800121 chr6:3225664-3250066 Sample_00_0038 Spinal cord spinal-cord_108d 121 4 615 25 0 105 474 TUBB2B,PSMG4
SE_02_118700177 chr6:3225665-3251850 Sample_02_1187 Brain GBM16 177 9 672 37 2 106 474 TUBB2B,PSMG4,LOC100507194
SE_02_031000728 chr6:3225708-3233326 Sample_02_0310 Neuroblastoma SJNB8 728 1 189 10 0 79 465 TUBB2B,PSMG4
SE_02_029600547 chr6:3225708-3233899 Sample_02_0296 Neuroblastoma CLB-BER-Lud 547 1 201 10 0 79 465 TUBB2B,PSMG4
SE_01_002100194 chr6:3225709-3233221 Sample_01_0021 Skin bipolar-neuron 194 1 187 10 0 79 465 TUBB2B,PSMG4
SE_02_030600406 chr6:3225712-3248973 Sample_02_0306 Autonomic ganglia SH-SY5Y 406 2 586 24 0 99 465 TUBB2B,PSMG4
SE_02_118300232 chr6:3225726-3252087 Sample_02_1183 Brain GBM12 232 6 683 40 2 99 462 TUBB2B,PSMG4,LOC100507194
SE_02_027700320 chr6:3225743-3233067 Sample_02_0277 Retina FW18 320 1 182 9 0 76 458 TUBB2B,PSMG4
SE_02_031400630 chr6:3225756-3252362 Sample_02_0314 Neuroblastoma SK-N-FI 630 3 694 43 2 96 456 TUBB2B,PSMG4
SE_02_030000326 chr6:3225756-3257687 Sample_02_0300 Neuroblastoma CLB-PE 326 4 1168 115 3 96 456 TUBB2B,PSMG4
SE_02_025100323 chr6:3225807-3234363 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 323 1 209 11 0 68 442 TUBB2B,PSMG4
SE_02_027500276 chr6:3225816-3232833 Sample_02_0275 Retina FW14 276 1 164 8 0 68 440 TUBB2B,PSMG4
SE_02_097400122 chr6:3225865-3232565 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 122 2 159 8 0 68 437 TUBB2B,PSMG4,LOC100507194
SE_02_001700578 chr6:3225905-3232556 Sample_02_0017 Embryo H9_ESC 578 2 158 8 0 65 433 TUBB2B,PSMG4
SE_02_027800349 chr6:3225905-3232859 Sample_02_0278 Retina FW24 349 1 166 8 0 65 433 TUBB2B,PSMG4
SE_02_117600095 chr6:3225917-3251604 Sample_02_1176 Brain GBM04 95 7 663 35 2 85 432 TUBB2B,PSMG4,LOC100507194
SE_02_030400397 chr6:3225930-3249235 Sample_02_0304 Neuroblastoma N206 397 2 588 24 0 85 431 TUBB2B,PSMG4
SE_02_120200652 chr6:3225968-3233616 Sample_02_1202 Brain GBM38 652 2 191 10 0 65 427 TUBB2B,PSMG4,LOC100507194
SE_02_001900578 chr6:3225980-3232552 Sample_02_0019 Embryo Neural crest cells 578 2 155 8 0 65 427 TUBB2B,PSMG4
SE_02_037200301 chr6:3225999-3252218 Sample_02_0372 Skeletal muscle RMS008 301 5 681 42 2 86 424 TUBB2B,PSMG4
SE_00_001000120 chr6:3226000-3232537 Sample_00_0010 Embryo endodermal-cell 120 1 154 8 0 65 424 TUBB2B,PSMG4
SE_02_121000140 chr6:3226019-3232775 Sample_02_1210 Brain GBM17 140 1 158 8 0 65 424 TUBB2B,PSMG4,LOC100507194
SE_02_118600463 chr6:3226030-3251560 Sample_02_1186 Brain GBM15 463 4 660 35 2 85 423 TUBB2B,PSMG4,LOC100507194
SE_02_097200281 chr6:3226049-3233029 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 281 1 171 9 0 65 422 TUBB2B,PSMG4,LOC100507194
SE_02_066300739 chr6:3226055-3249083 Sample_02_0663 Thyroid TT 739 4 579 24 0 85 421 TUBB2B,PSMG4,LOC100507194
SE_02_118200078 chr6:3226085-3251712 Sample_02_1182 Brain GBM11 78 8 659 37 2 86 418 TUBB2B,PSMG4,LOC100507194
SE_02_118100227 chr6:3226088-3251711 Sample_02_1181 Brain GBM10 227 7 659 37 2 86 418 TUBB2B,PSMG4,LOC100507194
SE_02_098400197 chr6:3226097-3233031 Sample_02_0984 Brain H3.3K27M-KO_DIPGXIII-C5P5 197 1 170 9 0 65 417 TUBB2B,PSMG4,LOC100507194
SE_02_004500404 chr6:3226099-3232411 Sample_02_0045 Embryo endodermal CyT49_ES_D7 404 3 147 8 0 65 417 TUBB2B,PSMG4
SE_02_054300169 chr6:3226109-3233115 Sample_02_0543 Brain Kelly_vehicle 169 1 174 10 0 65 415 TUBB2B,PSMG4,LOC100507194
SE_02_068800099 chr6:3226112-3234130 Sample_02_0688 Lung NCI-H211_no infection 99 3 194 10 0 65 413 TUBB2B,PSMG4,LOC100507194
SE_02_055500522 chr6:3226130-3232601 Sample_02_0555 Other HAP1_WT 522 2 149 8 0 65 410 TUBB2B,PSMG4,LOC100507194
SE_02_030800340 chr6:3226141-3233911 Sample_02_0308 Neuroblastoma SJNB1 340 1 189 10 0 65 410 TUBB2B,PSMG4
SE_02_079400210 chr6:3226145-3232853 Sample_02_0794 Brain 1552 210 1 157 8 0 65 409 TUBB2B,PSMG4,LOC100507194
SE_02_031300368 chr6:3226151-3248775 Sample_02_0313 Neuroblastoma SK-N-DZ 368 2 568 24 0 85 408 TUBB2B,PSMG4
SE_02_030900290 chr6:3226198-3233089 Sample_02_0309 Neuroblastoma SJNB6 290 1 171 9 0 64 403 TUBB2B,PSMG4
SE_02_095900103 chr6:3226239-3232745 Sample_02_0959 Brain H3.3K27M_BT245p6_cells 103 2 152 8 0 62 392 TUBB2B,PSMG4,LOC100507194
SE_02_119000127 chr6:3226252-3250951 Sample_02_1190 Brain GBM24 127 7 636 30 1 81 390 TUBB2B,PSMG4,LOC100507194
SE_02_093100099 chr6:3226269-3232934 Sample_02_0931 Embryo H9 UTXKO 99 1 162 8 0 61 388 TUBB2B,PSMG4,LOC100507194
SE_02_054100127 chr6:3226278-3248856 Sample_02_0541 Brain Kelly_NaiveJQ1 127 3 570 24 0 81 388 TUBB2B,PSMG4,LOC100507194
SE_02_031700973 chr6:3226337-3253617 Sample_02_0317 Neuroblastoma GICAN 973 3 747 51 2 82 379 TUBB2B,PSMG4
SE_02_027600241 chr6:3226341-3232902 Sample_02_0276 Retina FW15 241 1 158 8 0 61 378 TUBB2B,PSMG4
SE_02_031900807 chr6:3226410-3233325 Sample_02_0319 Neuroblastoma NB-EBc1 807 1 177 10 0 61 365 TUBB2B,PSMG4
SE_02_144200110 chr6:3226480-3251565 Sample_02_1442 Lung H69 110 5 652 35 2 81 346 TUBB2B,PSMG4,LOC100507194
SE_02_098300114 chr6:3226487-3232388 Sample_02_0983 Brain H3.3K27M_BT245-C1P5 114 2 143 8 0 61 341 TUBB2B,PSMG4,LOC100507194
SE_02_098000107 chr6:3226495-3232388 Sample_02_0980 Brain BT245 107 2 143 8 0 61 336 TUBB2B,PSMG4,LOC100507194
SE_02_119100605 chr6:3226563-3251679 Sample_02_1191 Brain GBM25 605 4 649 35 2 79 321 TUBB2B,PSMG4,LOC100507194
SE_02_093200155 chr6:3226571-3232947 Sample_02_0932 Embryo H9 WT_1 155 1 158 8 0 57 321 TUBB2B,PSMG4,LOC100507194
SE_01_004700114 chr6:3226575-3232850 Sample_01_0047 Embryo mid-neurogenesis-radial-glial-cells 114 1 152 8 0 57 321 TUBB2B,PSMG4
SE_02_068500014 chr6:3226594-3235250 Sample_02_0685 Lung NCI-H1048_no infection 14 2 225 11 0 55 320 TUBB2B,PSMG4,LOC100507194
SE_02_078800190 chr6:3226605-3250858 Sample_02_0788 Brain 3565 190 7 629 30 1 74 319 TUBB2B,PSMG4,LOC100507194
SE_02_069700070 chr6:3226621-3235395 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 70 3 227 11 0 52 315 TUBB2B,PSMG4,LOC100507194
SE_02_007500268 chr6:3226678-3233021 Sample_02_0075 Autonomic ganglia kelly_DMSO_3h 268 1 161 9 0 42 308 TUBB2B,PSMG4
SE_02_085600181 chr6:3226699-3250997 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 181 3 630 30 1 62 307 TUBB2B,PSMG4,LOC100507194
SE_02_095500103 chr6:3226720-3250456 Sample_02_0955 Brain IDH1_2469 103 6 609 27 1 62 301 TUBB2B,PSMG4,LOC100507194
SE_02_117400806 chr6:3226732-3251564 Sample_02_1174 Brain GBM02 806 8 648 35 2 62 301 TUBB2B,PSMG4,LOC100507194
SE_02_007600689 chr6:3226764-3232705 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 689 1 141 8 0 42 294 TUBB2B,PSMG4
SE_02_085400180 chr6:3226768-3232699 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 180 1 141 8 0 42 293 TUBB2B,PSMG4,LOC100507194
SE_02_093300167 chr6:3226772-3232526 Sample_02_0933 Embryo H7 UTXKO 167 2 138 8 0 42 292 TUBB2B,PSMG4,LOC100507194
SE_02_079500395 chr6:3226778-3232308 Sample_02_0795 Brain 1953 395 2 134 8 0 42 292 TUBB2B,PSMG4,LOC100507194
SE_02_004600515 chr6:3226808-3232512 Sample_02_0046 Embryo endodermal CyT49_ES_D10 515 3 135 7 0 42 285 TUBB2B,PSMG4
SE_02_085500298 chr6:3227009-3250744 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 298 4 609 26 1 58 280 TUBB2B,PSMG4,LOC100507194
SE_01_009500840 chr6:3227055-3232750 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 840 2 130 5 0 38 280 TUBB2B,PSMG4,LOC100507194
SE_02_097800256 chr6:3227754-3233236 Sample_02_0978 Brain 2168_IDH1 256 1 138 7 0 25 149 TUBB2B,PSMG4,LOC100507194
SE_02_121100794 chr6:3227778-3232854 Sample_02_1211 Brain GBM21 794 1 119 5 0 20 144 TUBB2B,PSMG4,LOC100507194
SE_02_027900109 chr6:3227791-3232448 Sample_02_0279 Retina RB 109 2 108 5 0 20 135 TUBB2B,PSMG4
SE_02_123900352 chr6:3227817-3232485 Sample_02_1239 Skin Waga_virus_positive 352 2 109 5 0 19 128 TUBB2B,PSMG4,LOC100507194
SE_02_093400176 chr6:3227820-3232754 Sample_02_0934 Embryo H7-WT 176 2 114 5 0 19 126 TUBB2B,PSMG4,LOC100507194
SE_02_129000317 chr6:3227827-3233381 Sample_02_1290 Lung NCI-H69_p8-15 317 1 140 7 0 19 124 TUBB2B,PSMG4,LOC100507194
SE_02_124400064 chr6:3227844-3233232 Sample_02_1244 Brain KCNR_ATRA 64 4 138 7 0 19 115 TUBB2B,PSMG4,LOC100507194
SE_02_080100277 chr6:3227857-3232801 Sample_02_0801 Brain 2235 277 1 114 5 0 17 111 TUBB2B,PSMG4,LOC100507194
SE_02_055800625 chr6:3227876-3232311 Sample_02_0558 iPSCs FX52 iPSCs mock 625 2 104 5 0 17 105 TUBB2B,PSMG4,LOC100507194
SE_02_083800162 chr6:3227961-3232533 Sample_02_0838 Embryo hNPCs_WT 162 2 103 5 0 17 92 TUBB2B,PSMG4,LOC100507194
SE_02_069800283 chr6:3228705-3235458 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 283 2 183 8 0 12 55 TUBB2B,PSMG4,LOC100507194
SE_02_069600125 chr6:3228709-3233618 Sample_02_0696 Lung COR-L311 125 2 131 7 0 12 54 TUBB2B,PSMG4,LOC100507194
SE_02_129200294 chr6:3228740-3232652 Sample_02_1292 Lung JHU-LX110-SCLC PDX 294 2 96 5 0 12 47 TUBB2B,PSMG4,LOC100507194
SE_02_078600037 chr6:3228817-3232099 Sample_02_0786 Brain 2489 37 3 82 5 0 12 31 TUBB2B,PSMG4,LOC100507194
SE_02_080000140 chr6:3228827-3251567 Sample_02_0800 Brain 3679 140 6 599 32 2 32 29 TUBB2B,PSMG4,LOC100507194
SE_02_096900350 chr6:3228853-3251027 Sample_02_0969 Brain H3.3K27M_PL637 350 8 580 27 1 32 29 TUBB2B,PSMG4,LOC100507194
SE_02_095600400 chr6:3229334-3251005 Sample_02_0956 Brain IDH1_2658 400 6 566 25 1 30 0 TUBB2B,PSMG4,LOC100507194
SE_02_018500845 chr6:3230938-3252243 Sample_02_0185 Skin UACC257 845 3 575 36 2 26 0 TUBB2B,PSMG4

Genomic distribution of SEs associated with TUBB2B

The strength of the tissue affected by the gene


Expression of TUBB2B