Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_004700122 chr1:10665980-10686694 20714 122 5 654 44 4 407 96 CASZ1
SE_01_004700034 chr1:10703783-10736493 32710 34 5 950 13 4 473 103 CASZ1
SE_01_004700038 chr1:146220310-146231821 11511 38 1 21 4 0 78 184 NOTCH2NL
SE_01_004700035 chr1:150560542-150580713 20171 35 3 526 53 4 85 831 MCL1,ADAMTSL4,MIR4257,ENSA
SE_01_004700200 chr1:154999238-155018335 19097 200 3 401 20 2 631 1598 ZBTB7B,ADAM15,PYGO2,EFNA4,DCST2,MIR4258,FLAD1,PBXIP1,DCST1,SHC1,CKS1B,LENEP
SE_01_004700198 chr1:155686498-155690005 3507 198 1 115 11 0 38 376 YY1AP1,DAP3
SE_01_004700244 chr1:156069790-156084478 14688 244 2 298 19 2 211 1859 MEX3A,RAB25,ROBLD3,SSR2,LMNA,UBQLN4
SE_01_004700044 chr1:156663187-156694207 31020 44 4 842 49 1 131 1499 NES,MRPL24,C1ORF66,ISG20L2,BCAN,HAPLN2,CRABP2
SE_01_004700029 chr1:157992249-158020825 28576 29 6 731 18 4 145 237 KIRREL
SE_01_004700081 chr1:15833450-15851303 17853 81 2 501 57 4 84 732 SPEN,FLJ37453,UQCRHL
SE_01_004700041 chr1:16641924-16659863 17939 41 2 241 9 0 17 1304 MST1P2,CROCCP2,NBPF1
SE_01_004700124 chr1:16903902-16928727 24825 124 3 860 85 0 27 353 CROCC
SE_01_004700066 chr1:1690619-1694052 3433 66 1 39 2 0 0 317 CDK11B,SLC35E2B,CDK11A
SE_01_004700072 chr1:1743894-1747437 3543 72 1 31 2 0 0 294 SLC35E2,NADK,CDK11A,CDK11B
SE_01_004700039 chr1:205273253-205315338 42085 39 5 1173 115 16 188 1096 NUAK2,TMCC2,KLHDC8A
SE_01_004700105 chr1:205443319-205457752 14433 105 2 399 14 2 104 331 MIR135B,LEMD1,CDK18
SE_01_004700067 chr1:2205191-2231950 26759 67 4 864 40 2 101 610 SKI,C1ORF86,LOC100128003
SE_01_004700208 chr1:2269587-2291641 22054 208 3 852 52 2 30 0 SKI
SE_01_004700121 chr1:227895574-227924126 28552 121 5 949 63 3 84 239 WNT9A
SE_01_004700063 chr1:2310680-2331782 21102 63 4 805 50 3 48 313 MORN1,LOC100129534
SE_01_004700070 chr1:234720177-234746234 26057 70 3 752 36 3 79 673 NCRNA00184,IRF2BP2
SE_01_004700116 chr1:23553212-23569791 16579 116 3 525 29 1 168 382 ID3,E2F2
SE_01_004700136 chr1:2426052-2448645 22593 136 3 832 53 1 68 0 RER1,PEX10,MORN1,PLCH2
SE_01_004700091 chr1:2528626-2549953 21327 91 3 689 54 0 156 474 LOC115110,HES5,PANK4,C1ORF93,TNFRSF14
SE_01_004700117 chr1:27496374-27529364 32990 117 5 859 68 1 237 0 WASF2
SE_01_004700119 chr1:27559511-27575707 16196 119 4 431 17 0 263 0 AHDC1
SE_01_004700004 chr1:3070652-3143336 72684 4 11 2794 65 3 364 100 MIR4251,PRDM16,FLJ42875,ACTRT2
SE_01_004700019 chr1:3160823-3221344 60521 19 7 2325 40 12 320 163 PRDM16,MIR4251
SE_01_004700129 chr1:31759697-31790094 30397 129 4 735 32 1 337 167 BAI2,MIR4254,SPOCD1
SE_01_004700216 chr1:3246052-3265098 19046 216 2 623 11 0 52 0 PRDM16,MIR4251
SE_01_004700155 chr1:3589486-3611608 22122 155 3 890 50 1 0 428 MEGF6,TP73,MIR551A,WDR8,TPRG1L
SE_01_004700171 chr1:36148444-36158220 9776 171 2 267 14 1 147 447 MAP7D1,TRAPPC3,COL8A2
SE_01_004700112 chr1:41476362-41497819 21457 112 3 668 50 1 126 869 EDN2
SE_01_004700195 chr1:46300702-46304652 3950 195 1 93 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_004700161 chr1:53287091-53306047 18956 161 2 523 58 0 110 77 LRP8,MAGOH
SE_01_004700128 chr1:54461262-54490130 28868 128 3 805 19 4 108 0 SSBP3
SE_01_004700190 chr1:6439666-6454822 15156 190 4 431 33 2 192 1193 ESPN,PLEKHG5,ACOT7,MIR4252,HES2,TNFRSF25
SE_01_004700099 chr1:7667154-7681830 14676 99 2 494 35 4 75 455 CAMTA1,VAMP3
SE_01_004700076 chr10:102625880-102651312 25432 76 4 595 60 5 277 1013 SUFU,TRIM8
SE_01_004700170 chr10:104327638-104340121 12483 170 2 317 31 2 34 424 ITPRIP,CCDC147
SE_01_004700011 chr10:117531770-117555125 23355 11 2 592 8 0 343 1034 EMX2,EMX2OS
SE_01_004700194 chr10:17226679-17231461 4782 194 1 147 9 0 51 452 VIM,TRDMT1
SE_01_004700221 chr10:72324508-72337889 13381 221 2 409 28 0 57 807 DNAJB12
SE_01_004700051 chr10:75394592-75410042 15450 51 3 444 18 0 306 1530 NCRNA00245,ZNF503
SE_01_004700211 chr10:78964220-78976345 12125 211 2 332 6 0 98 0 LOC283050
SE_01_004700182 chr10:79219782-79244696 24914 182 3 656 14 2 169 128 ZMIZ1,PPIF
SE_01_004700199 chr10:80454217-80466231 12014 199 3 341 39 5 56 102 TSPAN14,C10ORF58
SE_01_004700045 chr11:118908485-118930680 22195 45 6 523 40 3 394 457 BCL9L,CXCR5,UPK2,FOXR1
SE_01_004700085 chr11:119701639-119729033 27394 85 5 786 53 0 265 178 PVRL1
SE_01_004700206 chr11:126099829-126117243 17414 206 3 596 32 5 114 0 CDON
SE_01_004700140 chr11:1371611-1401613 30002 140 5 1024 125 5 59 240 BRSK2
SE_01_004700036 chr11:31802263-31818966 16703 36 2 415 22 1 313 1131 PAX6,DKFZP686K1684
SE_01_004700158 chr11:57637279-57650814 13535 158 2 318 18 1 136 1000 YPEL4,MIR130A,ZDHHC5,SERPING1,CLP1
SE_01_004700107 chr11:62541972-62557202 15230 107 4 365 26 1 173 185 AHNAK,EEF1G,TUT1,MTA2
SE_01_004700210 chr11:62704861-62710814 5953 210 1 157 7 0 70 814 BSCL2,GNG3,LRRN4CL,C11ORF83,ZBTB3,C11ORF48,METTL12,TTC9C,SNORA57,HNRNPUL2,UBXN1
SE_01_004700054 chr11:64017381-64053913 36532 54 5 970 68 1 217 0 MACROD1,OTUB1,FLRT1,COX8A
SE_01_004700012 chr11:65476209-65504728 28519 12 4 852 83 4 22 742 MALAT1,MIR612,SCYL1
SE_01_004700075 chr11:68313015-68343244 30229 75 3 923 68 1 109 0 LRP5,C11ORF24
SE_01_004700205 chr11:68369673-68378286 8613 205 3 326 14 0 34 0 LRP5
SE_01_004700092 chr11:69462924-69498471 35547 92 6 1205 39 5 63 983 CCND1
SE_01_004700037 chr11:69636173-69659973 23800 37 4 759 18 2 160 1542 CCND1,ORAOV1,FGF19
SE_01_004700062 chr11:73306317-73335900 29583 62 4 841 92 6 246 933 ARHGEF17,RELT,P2RY6
SE_01_004700027 chr12:124498647-124521084 22437 27 4 792 10 3 36 141 NCOR2
SE_01_004700187 chr12:131217832-131236605 18773 187 3 692 50 1 0 0 LOC116437
SE_01_004700123 chr12:132427651-132455101 27450 123 6 1301 151 2 1 0 FBRSL1
SE_01_004700230 chr12:31322592-31326777 4185 230 1 105 1 0 0 575 FLJ13224,FAM60A
SE_01_004700239 chr12:46266256-46270573 4317 239 1 123 5 3 49 492 SLC38A1
SE_01_004700242 chr12:49187599-49215984 28385 242 3 675 46 1 76 257 TUBA1A,TUBA1C
SE_01_004700241 chr12:51846903-51870246 23343 241 4 612 45 5 91 0 ANKRD33,ACVRL1,FIGNL2
SE_01_004700135 chr12:54349822-54360764 10942 135 3 243 10 1 131 277 COPZ1,ZNF385A,MIR148B,NFE2,GPR84
SE_01_004700189 chr12:57085619-57102985 17366 189 3 463 32 5 287 2013 STAT6,NAB2,MYO1A,LRP1,TMEM194A
SE_01_004700153 chr12:6923942-6939575 15633 153 2 356 27 0 241 1381 ATN1,RPL13P5,PTPN6,C12ORF57,PHB2,DSTNP2,SCARNA12,LRRC23,EMG1,MIR141,ENO2,MIR200C
SE_01_004700078 chr12:89348195-89355878 7683 78 1 232 20 0 141 466 DUSP6
SE_01_004700174 chr13:110711247-110717020 5773 174 1 170 12 0 61 1011 ING1,CARS2
SE_01_004700087 chr13:112054967-112074979 20012 87 4 517 1 0 273 765 SOX1
SE_01_004700068 chr13:112981793-113024257 42464 68 5 1629 105 3 35 261 MCF2L,LOC100289410
SE_01_004700173 chr13:114063912-114080302 16390 173 3 598 54 0 4 178 RASA3
SE_01_004700052 chr13:114099915-114132950 33035 52 4 1095 104 2 51 193 RASA3
SE_01_004700145 chr13:80336114-80343827 7713 145 1 174 4 0 154 564 SPRY2
SE_01_004700002 chr13:99954738-99993152 38414 2 4 949 8 4 780 1645 ZIC2,ZIC5
SE_01_004700152 chr14:105470497-105484743 14246 152 4 443 25 0 81 1718 MTA1,CRIP2,CRIP1,C14ORF80,TMEM121
SE_01_004700149 chr14:22976161-22983855 7694 149 1 187 12 0 119 734 JUB,PRMT5,C14ORF93,HAUS4
SE_01_004700080 chr14:28758263-28786337 28074 80 6 580 13 2 493 1081 C14ORF23,FOXG1
SE_01_004700131 chr14:34545405-34557697 12292 131 2 231 20 0 3 0 EAPP
SE_01_004700084 chr14:56798282-56818370 20088 84 3 486 5 0 314 801 OTX2,OTX2OS1
SE_01_004700157 chr14:68789038-68796791 7753 157 1 298 4 3 169 853 C14ORF181,ZFP36L1
SE_01_004700069 chr14:75276126-75296660 20534 69 2 517 37 1 272 859 FOS
SE_01_004700082 chr14:76916717-76927909 11192 82 2 314 13 0 94 0 C14ORF166B,C14ORF4
SE_01_004700159 chr14:76946342-76962828 16486 159 4 433 34 0 91 0 C14ORF4
SE_01_004700008 chr14:76999877-77053451 53574 8 7 1547 120 12 508 1041 C14ORF4,KIAA1737
SE_01_004700098 chr14:99518223-99547004 28781 98 7 943 44 1 46 248 CCDC85C,CCNK,SETD3
SE_01_004700111 chr14:99559990-99580536 20546 111 3 738 84 1 37 0 CCDC85C
SE_01_004700238 chr15:75449975-75456684 6709 238 1 124 5 0 134 359 SIN3A
SE_01_004700240 chr15:75697642-75713580 15938 240 3 402 24 0 104 166 CSPG4,MIR4313,ODF3L1,DNM1P35,SNX33
SE_01_004700179 chr15:77878345-77904337 25992 179 4 985 166 0 238 83 LOC645752,LOC91450
SE_01_004700233 chr15:85750130-85773655 23525 233 4 912 113 0 73 977 KLHL25,MIR1276
SE_01_004700126 chr15:92807961-92833526 25565 126 3 783 14 0 46 0 LOC100507217,ASB9P1
SE_01_004700164 chr16:1407868-1435572 27704 164 4 1024 75 1 69 1316 C16ORF91,UNKL,CCDC154,CLCN7
SE_01_004700183 chr16:15140410-15149937 9527 183 2 347 13 0 0 0 RRN3,MIR3180-4
SE_01_004700176 chr16:2121331-2131104 9773 176 2 337 32 0 20 112 PKD1,SNORD60,TRAF7,RAB26,MIR3180-5,MIR1225
SE_01_004700095 chr16:29129374-29159164 29790 95 4 1117 164 8 0 0 RRN3P2,RUNDC2C
SE_01_004700214 chr16:29283538-29294359 10821 214 2 403 72 0 0 186 RUNDC2C
SE_01_004700096 chr16:30192206-30207974 15768 96 2 34 2 0 88 2208 SLX1B,SULT1A3,SULT1A4,BOLA2B,SLX1A-SULT1A3,LOC388242,LOC613037,CORO1A
SE_01_004700138 chr16:4305986-4329499 23513 138 4 724 50 1 201 0 GLIS2,VASN,TFAP4,PAM16
SE_01_004700202 chr16:49695729-49704661 8932 202 1 237 2 0 196 0 ZNF423
SE_01_004700212 chr16:58493650-58502155 8505 212 2 223 19 0 40 346 NDRG4,SETD6,SNORA46
SE_01_004700042 chr16:70690115-70716929 26814 42 4 835 80 0 145 782 VAC14,LOC100130894,MTSS1L
SE_01_004700089 chr16:85201515-85235932 34417 89 4 1384 10 1 59 0 LOC400548
SE_01_004700191 chr16:85283515-85311808 28293 191 4 1077 9 2 36 427 LOC400548
SE_01_004700228 chr16:85327567-85350386 22819 228 3 923 6 1 49 0 LOC400548
SE_01_004700018 chr16:85553471-85627192 73721 18 8 2782 12 2 406 312 KIAA0182
SE_01_004700209 chr16:88145122-88170342 25220 209 3 1073 40 2 10 0 BANP
SE_01_004700186 chr16:88257557-88268403 10846 186 2 447 21 3 0 0 ZNF469
SE_01_004700030 chr17:17667976-17701842 33866 30 6 860 43 0 170 210 RAI1
SE_01_004700009 chr17:17721284-17790746 69462 9 6 1751 101 0 319 816 SMCR5,RAI1,MIR33B,SREBF1
SE_01_004700201 chr17:17821915-17838100 16185 201 2 400 42 1 30 312 SREBF1,MIR33B,SMCR5
SE_01_004700144 chr17:2392754-2402643 9889 144 2 283 15 0 190 609 MNT,LOC284009
SE_01_004700184 chr17:40098373-40122286 23913 184 3 597 52 0 284 270 NR1D1,MSL1,MED24,CASC3,THRA
SE_01_004700150 chr17:43528619-43547729 19110 150 2 479 35 0 232 1240 ETV4,DHX8
SE_01_004700185 chr17:44539309-44559835 20526 185 3 503 30 0 195 507 FZD2,GPATCH8
SE_01_004700073 chr17:47990278-48024995 34717 73 6 866 117 1 2 0 COPZ2,NFE2L1,PRR15L,PNPO,CDK5RAP3,MIR152
SE_01_004700071 chr17:48994775-49023521 28746 71 4 648 36 3 188 305 IGF2BP1,SNF8,GIP
SE_01_004700139 chr17:50892849-50932232 39383 139 6 1086 69 2 96 0 TOB1,WFIKKN2
SE_01_004700236 chr17:57396398-57409008 12610 236 2 316 5 2 98 52 MSI2
SE_01_004700058 chr17:57505903-57539343 33440 58 4 950 14 4 185 46 MSI2
SE_01_004700006 chr17:57889679-57956656 66977 6 12 1758 93 3 282 311 CUEDC1,MRPS23,VEZF1
SE_01_004700243 chr17:64504505-64508500 3995 243 1 199 15 3 61 355 DDX5,CCDC45,C17ORF60,POLG2
SE_01_004700118 chr17:76131055-76143571 12516 118 4 363 24 0 0 1243 FOXJ1,RNF157,EXOC7
SE_01_004700016 chr17:77432745-77481482 48737 16 5 1557 28 0 118 757 SEPT9,MIR4316,9-SEP
SE_01_004700142 chr17:7833002-7845363 12361 142 2 314 16 1 299 432 DNAH2,KDM6B,LSMD1,CYB5D1,CHD3,TMEM88
SE_01_004700059 chr17:78342005-78375603 33598 59 4 991 32 1 251 799 SOCS3,PGS1
SE_01_004700180 chr17:78882435-78903804 21369 180 3 840 57 7 57 588 TIMP2,USP36
SE_01_004700127 chr17:79788935-79813082 24147 127 3 561 28 4 288 679 CBX8,CBX2,CBX4
SE_01_004700028 chr17:81327894-81347710 19816 28 3 649 49 0 103 217 TMEM105,SLC38A10,C17ORF55
SE_01_004700137 chr17:8138550-8157881 19331 137 2 690 46 2 372 2565 PER1,HES7,ALOXE3,VAMP2,MIR3676,C17ORF59,TMEM107
SE_01_004700013 chr17:81385778-81425190 39412 13 6 1407 87 2 412 274 BAHCC1,MIR3186
SE_01_004700220 chr17:81510636-81524323 13687 220 3 550 59 1 105 536 ACTG1,FSCN2,C17ORF70
SE_01_004700147 chr18:3446686-3455012 8326 147 1 239 8 1 151 657 TGIF1
SE_01_004700031 chr18:48825772-48870078 44306 31 5 1361 22 7 235 957 KIAA0427,SMAD7
SE_01_004700113 chr19:13149238-13165535 16297 113 2 428 37 1 108 866 STX10,IER2,TRMT1,NACC1,LYL1
SE_01_004700203 chr19:13842587-13851894 9307 203 2 244 22 0 114 0 MIR181C,ZSWIM4,MIR27A,MIR24-2,MIR23A,MIR181D,NANOS3,LOC284454
SE_01_004700108 chr19:18279241-18306099 26858 108 3 750 81 1 112 716 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_01_004700043 chr19:18415792-18441116 25324 43 3 727 51 3 184 2657 SSBP4,ISYNA1,GDF15,MIR3189,LRRC25
SE_01_004700065 chr19:2041022-2063062 22040 65 4 766 38 2 76 1159 MKNK2,MOBKL2A,BTBD2,IZUMO4
SE_01_004700213 chr19:38647284-38668099 20815 213 3 582 56 1 134 172 ACTN4,EIF3K,MAP4K1
SE_01_004700047 chr19:42242724-42283955 41231 47 4 975 64 2 865 1225 ERF,CIC,MEGF8,PAFAH1B3,PRR19,TMEM145,DEDD2,ZNF526,GSK3A
SE_01_004700151 chr19:4369125-4395167 26042 151 5 860 63 4 0 0 SH3GL1,MPND,CHAF1A,STAP2
SE_01_004700130 chr19:45442662-45471338 28676 130 4 760 68 0 237 421 FOSB,PPM1N,ERCC1,PPP1R13L,RTN2,CD3EAP,VASP
SE_01_004700156 chr19:47109243-47114329 5086 156 1 149 3 0 140 324 ZC3H4,SAE1
SE_01_004700166 chr19:54178511-54192589 14078 166 2 466 42 5 113 1560 TSEN34,MBOAT7,TMC4,RPS9,LENG1,CNOT3,LILRB3
SE_01_004700134 chr19:6215213-6229504 14291 134 2 509 11 1 37 604 MLLT1
SE_01_004700017 chr2:104841805-104874198 32393 17 5 668 31 2 420 1260 POU3F3
SE_01_004700022 chr2:110021672-110056359 34687 22 4 266 10 0 56 0 MIR4267
SE_01_004700020 chr2:110315106-110349718 34612 20 5 217 9 0 53 0 LOC151009
SE_01_004700049 chr2:111343287-111378812 35525 49 5 608 15 0 134 164 LOC541471
SE_01_004700090 chr2:120757311-120788850 31539 90 5 924 29 2 81 0 GLI2
SE_01_004700196 chr2:128361802-128380327 18525 196 3 600 21 5 35 0 HS6ST1
SE_01_004700115 chr2:231602689-231615929 13240 115 2 347 38 0 87 0 C2ORF57
SE_01_004700175 chr2:231665050-231688315 23265 175 5 698 15 3 74 0 PTMA,MIR1244-2
SE_01_004700163 chr2:231705576-231710156 4580 163 1 185 13 1 97 562 PTMA,MIR1244-2
SE_01_004700172 chr2:234980558-235007117 26559 172 3 940 9 2 33 225 SH3BP4
SE_01_004700215 chr2:240677708-240697192 19484 215 4 534 62 1 38 1764 AQP12A,AQP12B
SE_01_004700102 chr2:43217227-43228776 11549 102 2 390 16 0 198 1152 ZFP36L2,LOC100129726
SE_01_004700083 chr2:47031343-47048247 16904 83 3 586 23 3 58 181 TTC7A,MCFD2
SE_01_004700169 chr2:5690129-5698304 8175 169 2 168 6 0 123 1024 SOX11
SE_01_004700023 chr2:63043517-63059833 16316 23 1 314 7 0 280 1694 LOC100132215,EHBP1,OTX1
SE_01_004700222 chr2:70085341-70090110 4769 222 1 142 13 0 125 686 LOC400960,PCBP1,LOC100133985
SE_01_004700232 chr2:85417797-85438943 21146 232 3 581 74 0 90 1884 SH2D6,CAPG
SE_01_004700061 chr2:85740482-85773671 33189 61 4 997 67 3 292 706 ATOH8,GNLY
SE_01_004700056 chr2:87572003-87605655 33652 56 5 606 17 0 126 0 NCRNA00152
SE_01_004700219 chr20:31603569-31609769 6200 219 1 275 22 2 116 400 ID1,MIR3193,COX4I2
SE_01_004700014 chr20:32445365-32485963 40598 14 6 1138 62 0 302 1585 C20ORF112
SE_01_004700168 chr20:32605103-32629392 24289 168 4 718 41 0 82 199 LOC149950,C20ORF203
SE_01_004700057 chr20:37392952-37420694 27742 57 3 869 10 0 84 1330 SRC
SE_01_004700040 chr20:47347935-47361823 13888 40 1 331 2 4 140 785 ZMYND8,LOC100131496
SE_01_004700109 chr20:63353818-63378878 25060 109 3 913 98 4 69 1204 CHRNA4
SE_01_004700217 chr21:42218624-42236115 17491 217 2 536 21 3 82 418 ABCG1
SE_01_004700097 chr21:43322798-43356603 33805 97 4 1233 38 3 42 0 SIK1
SE_01_004700077 chr21:43381372-43413218 31846 77 6 1201 3 3 16 0 SIK1,C21ORF125
SE_01_004700132 chr21:45405572-45431510 25938 132 3 1071 92 1 33 1439 NCRNA00175,COL18A1
SE_01_004700055 chr22:19873572-19903766 30194 55 4 1069 129 4 143 1520 TXNRD2,C22ORF29,COMT,GNB1L
SE_01_004700100 chr22:19974593-20002568 27975 100 4 946 105 5 198 1222 ARVCF,COMT,C22ORF25,MIR185,TXNRD2
SE_01_004700141 chr22:20305744-20322321 16577 141 3 515 29 0 45 1730 DGCR6L,RTN4R
SE_01_004700064 chr22:23513995-23534589 20594 64 4 915 138 4 0 0 IGLL1
SE_01_004700079 chr22:45877469-45908556 31087 79 4 1228 61 0 118 0 WNT7B
SE_01_004700207 chr22:45959524-45979921 20397 207 4 659 6 1 223 388 WNT7B,LOC730668
SE_01_004700143 chr22:50292206-50307822 15616 143 4 494 44 0 105 246 PLXNB2,FAM116B,TUBGCP6,MAPK12,HDAC10,MAPK11,PPP6R2
SE_01_004700106 chr3:134363275-134375996 12721 106 2 343 16 3 129 925 AMOTL2
SE_01_004700001 chr3:147355262-147425540 70278 1 7 1799 59 4 885 2256 ZIC4,ZIC1
SE_01_004700026 chr3:181709361-181731731 22370 26 3 489 0 1 452 517 SOX2,SOX2OT
SE_01_004700032 chr3:184560540-184604982 44442 32 6 1258 62 0 425 1765 EPHB3
SE_01_004700050 chr3:42013673-42072984 59311 50 7 1555 180 11 108 0 TRAK1,ULK4
SE_01_004700110 chr3:49688046-49692379 4333 110 1 94 3 0 40 404 RNF123,MST1,GMPPB,AMIGO3,APEH
SE_01_004700125 chr3:50257841-50273869 16028 125 3 364 21 0 196 2041 GNAI2,SEMA3B,HYAL3,HYAL1,NAT6,HYAL2,IFRD2,C3ORF45
SE_01_004700162 chr3:52297987-52318395 20408 162 3 469 34 4 6 213 DNAH1,MIR135A1,MIRLET7G,GLYCTK,WDR82
SE_01_004700146 chr3:62367087-62379277 12190 146 3 313 0 0 253 756 FEZF2,C3ORF14
SE_01_004700101 chr4:3465515-3495016 29501 101 4 1487 179 2 80 1277 DOK7,LRPAP1,HGFAC
SE_01_004700204 chr5:138448298-138466915 18617 204 2 477 44 1 136 295 EGR1,REEP2
SE_01_004700005 chr5:139637050-139712773 75723 5 9 1753 109 7 1039 572 CXXC5
SE_01_004700093 chr5:139733033-139766343 33310 93 4 779 39 1 334 0 PSD2
SE_01_004700060 chr5:141492971-141523333 30362 60 4 717 59 0 170 1111 PCDHGB3,PCDHGC3,PCDHGA2,PCDHGA3,PCDHGA8,PCDHGA11,PCDHGA10,PCDHGA12,PCDHGA4,PCDHGA9,PCDHGB6,PCDHGC5,DIAPH1,PCDHGA5,PCDHGB4,PCDHGB5,PCDHGB7,PCDHGA7,PCDHGB1,PCDHGC4,PCDHGA1,PCDHGA6,PCDHGB2
SE_01_004700178 chr5:150137056-150156832 19776 178 4 549 52 0 112 221 PDGFRB,CDX1,SLC6A7,CSF1R
SE_01_004700033 chr5:671098-695459 24361 33 5 817 115 1 51 546 TPPP
SE_01_004700021 chr5:751606-786791 35185 21 6 1188 117 0 36 0 TPPP
SE_01_004700229 chr5:843918-851023 7105 229 1 272 29 0 16 452 ZDHHC11,TRIP13,BRD9
SE_01_004700007 chr5:88659315-88693461 34146 7 3 727 23 4 605 892 LOC645323,MIR9-2
SE_01_004700223 chr5:91378990-91384759 5769 223 1 108 6 0 84 319 ARRDC3,LOC100129716
SE_01_004700192 chr6:113854170-113859595 5425 192 1 122 4 0 138 181 MARCKS,FLJ34503
SE_01_004700227 chr6:170437455-170465388 27933 227 4 984 93 2 22 0 PSMB1
SE_01_004700218 chr6:21586518-21597557 11039 218 2 259 2 0 172 714 SOX4
SE_01_004700167 chr6:30879599-30887453 7854 167 1 179 22 10 71 652 DDR1,SFTA2,GTF2H4,VARS2
SE_01_004700120 chr6:32030630-32049147 18517 120 2 364 47 5 170 3026 CYP21A2,TNXB,C4A,C4B,TNXA,STK19
SE_01_004700114 chr6:3226575-3232850 6275 114 1 152 8 0 57 321 TUBB2B,PSMG4
SE_01_004700086 chr6:32967296-32972062 4766 86 1 161 31 4 98 596 BRD2,HLA-DMA,HLA-DOA,HLA-DMB
SE_01_004700094 chr7:105011685-105016477 4792 94 1 151 3 0 99 607 MLL5,LOC100216545
SE_01_004700177 chr7:130350084-130374958 24874 177 4 686 73 3 147 909 CPA5,CPA1
SE_01_004700165 chr7:1535748-1540048 4300 165 1 184 15 0 34 568 MAFK,INTS1,PSMG3,KIAA1908,TMEM184A
SE_01_004700237 chr7:1663502-1677188 13686 237 4 395 22 0 87 0 TFAMP1,ELFN1,KIAA1908
SE_01_004700160 chr7:20328899-20332703 3804 160 1 105 2 0 56 364 ITGB8
SE_01_004700088 chr7:20776652-20798559 21907 88 4 499 3 3 399 766 SP8,RPL23P8
SE_01_004700025 chr7:2495099-2533392 38293 25 4 1404 76 2 290 1739 LFNG,C7ORF27,IQCE
SE_01_004700053 chr7:2616338-2642255 25917 53 5 946 82 0 64 229 TTYH3,AMZ1
SE_01_004700015 chr7:5417964-5431140 13176 15 1 390 3 0 258 846 TNRC18
SE_01_004700225 chr8:143367288-143390140 22852 225 3 875 84 1 78 2316 C8ORF51,RHPN1,TOP1MT,MAFA
SE_01_004700188 chr8:22588389-22601058 12669 188 2 371 48 0 45 1574 PDLIM2,C8ORF58,KIAA1967,SORBS3,FLJ14107
SE_01_004700103 chr8:29347181-29354183 7002 103 1 178 14 0 84 647 DUSP4
SE_01_004700235 chr8:76672311-76684795 12484 235 2 267 6 0 242 292 ZFHX4,LOC100192378
SE_01_004700234 chr9:121557437-121583406 25969 234 3 872 79 4 55 97 DAB2IP
SE_01_004700104 chr9:123355395-123377279 21884 104 2 780 47 0 172 1924 CRB2,MIR601
SE_01_004700193 chr9:124007731-124019493 11762 193 3 307 1 0 228 881 LHX2
SE_01_004700010 chr9:129401720-129464308 62588 10 8 1944 67 2 188 0 C9ORF106
SE_01_004700046 chr9:129481545-129501576 20031 46 3 546 30 0 84 419 C9ORF50,METTL11A
SE_01_004700224 chr9:129549108-129568928 19820 224 4 677 49 0 16 0 C9ORF50,METTL11A
SE_01_004700231 chr9:131382345-131418742 36397 231 5 1086 45 1 72 146 BAT2L1,SNORD62A
SE_01_004700226 chr9:133132558-133149215 16657 226 3 513 46 0 61 127 RALGDS,GBGT1
SE_01_004700181 chr9:133875778-133893859 18081 181 5 651 23 2 0 0 VAV2
SE_01_004700024 chr9:134314948-134362089 47141 24 7 1567 96 2 230 445 RXRA
SE_01_004700154 chr9:134374640-134391967 17327 154 4 677 30 1 43 123 RXRA
SE_01_004700048 chr9:135980793-136018776 37983 48 5 1399 63 1 174 1506 NACC2,UBAC1
SE_01_004700074 chr9:136324385-136347242 22857 74 4 895 77 1 88 2275 LOC26102,GPSM1,DNLZ,CARD9
SE_01_004700003 chr9:136511392-136626060 114668 3 16 4049 211 1 392 2689 NOTCH1,EGFL7,SEC16A,C9ORF163,MIR126
SE_01_004700197 chr9:38015761-38029438 13677 197 3 435 37 3 66 93 SHB
SE_01_004700133 chrX:137549012-137574430 25418 133 3 442 9 0 396 723 ZIC3
SE_01_004700148 chrX:40083095-40109223 26128 148 5 409 1 0 659 173 BCOR

SE annotation visualization


Information description of sample and annotation

Case ID: Name:ENCSR092TTO
Input ID: Name:ENCSR287XMW
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb