SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000284567
Gene: MIR223 Gene type: miRNA
Strand: + External links:
Genomic region: chrX:66018870-66018979 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_071200597 chrX:65917972-65934288 Sample_02_0712 Pancreas BxPC3_sgNEG 597 9 427 24 0 0 0 MIR223
SE_02_094600767 chrX:65919493-65934406 Sample_02_0946 Tongue HN12 767 5 406 23 0 0 0 MIR223,MSN
SE_02_070700701 chrX:65919885-65934234 Sample_02_0707 Pancreas BxPC3 WT 701 4 389 22 0 0 0 MIR223,HEPH
SE_02_111900010 chrX:65968506-66090340 Sample_02_1119 Blood KBM7 10 35 2913 109 1 128 1066 MIR223,VSIG4
SE_02_017600075 chrX:65982050-66023195 Sample_02_0176 Peripheral blood LOUCY 75 3 1012 37 0 77 613 VSIG4,MIR223
SE_02_003100131 chrX:65982218-66031321 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 131 7 1192 47 0 86 767 VSIG4,MIR223
SE_02_033400067 chrX:65982468-66031866 Sample_02_0334 Haematopoietic and lymphoid tissue MOLM14_CA25_11 67 4 1193 47 0 86 767 VSIG4,MIR223
SE_02_143100771 chrX:65982649-66023188 Sample_02_1431 Blood T cell 771 5 999 37 0 77 613 MIR223,VSIG4
SE_02_103400359 chrX:65982784-66022287 Sample_02_1034 Blood AML cell 359 6 969 37 0 76 474 MIR223,VSIG4
SE_02_122900067 chrX:65982809-66065054 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 67 22 1983 70 0 106 1066 MIR223,VSIG4,HEPH
SE_02_083600125 chrX:65984337-66023305 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 125 8 959 36 0 77 613 MIR223,VSIG4
SE_02_083400131 chrX:65984383-66022919 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 131 4 949 36 0 77 589 MIR223,VSIG4
SE_02_022200030 chrX:65984399-66022264 Sample_02_0222 Blood DU-528 30 1 925 36 0 76 472 VSIG4,MIR223
SE_02_033600028 chrX:65984515-66031870 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 28 2 1140 46 0 86 767 VSIG4,MIR223
SE_02_033500060 chrX:65984532-66023174 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 60 2 947 36 0 77 613 VSIG4,MIR223
SE_04_000100047 chrX:65984657-66033887 Sample_04_0001 Blood heat shocked K562 47 3 1199 47 0 99 951 MIR223,VSIG4
SE_02_083700131 chrX:65984713-66030994 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 131 11 1116 45 0 86 767 MIR223,VSIG4
SE_02_022400046 chrX:65984730-66021977 Sample_02_0224 Haematopoietic and lymphoid tissue P12-ICHIKAWA 46 5 896 36 0 75 423 VSIG4,MIR223
SE_02_033200085 chrX:65984778-66022883 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 85 2 931 36 0 77 586 VSIG4,MIR223
SE_02_134600023 chrX:65984812-66021919 Sample_02_1346 Leukophereses leukophereses_p400 23 17 893 36 0 75 414 MIR223,VSIG4
SE_02_022100022 chrX:65984879-66023510 Sample_02_0221 Blood CCRF-CEM 22 2 941 36 0 77 613 VSIG4,MIR223
SE_02_033100076 chrX:65984899-66021638 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 76 5 880 35 0 74 386 MIR223,VSIG4
SE_02_022300076 chrX:65984904-66020223 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 76 2 840 34 0 73 340 MIR223,VSIG4
SE_02_046000031 chrX:65984986-66023063 Sample_02_0460 Blood ME-1_I-10-49_6h 31 7 924 36 0 77 613 MIR223,VSIG4
SE_02_014400064 chrX:65984990-66022824 Sample_02_0144 Peripheral blood MV411_DMSO 64 1 921 36 0 76 581 VSIG4,MIR223
SE_02_045900038 chrX:65985020-66022942 Sample_02_0459 Blood ME-1_DMSO_6h 38 3 921 36 0 77 592 MIR223,VSIG4
SE_02_033300065 chrX:65985030-66022111 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 65 3 891 36 0 75 445 VSIG4,MIR223
SE_02_113000031 chrX:65985048-66031877 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 31 11 1117 46 0 86 767 MIR223,VSIG4
SE_02_083300105 chrX:65985060-66030921 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 105 4 1098 45 0 86 767 MIR223,VSIG4
SE_02_082200021 chrX:65985081-66031236 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 21 8 1105 45 0 86 767 MIR223,VSIG4
SE_04_000200044 chrX:65985096-66032244 Sample_04_0002 Blood cold shocked K562 44 2 1125 46 0 86 767 MIR223,VSIG4
SE_02_050200061 chrX:65985116-66021975 Sample_02_0502 Blood HL-60_PMA_16h 61 13 882 36 0 75 423 MIR223,VSIG4
SE_02_082000026 chrX:65985128-66031130 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 26 7 1103 45 0 86 767 MIR223,VSIG4
SE_02_058200030 chrX:65985138-66022890 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 30 5 918 36 0 77 586 MIR223,VSIG4
SE_02_058000042 chrX:65985145-66031092 Sample_02_0580 Blood HEL_sgSIK3e4 42 8 1102 45 0 86 767 MIR223,VSIG4
SE_02_050100017 chrX:65985176-66022226 Sample_02_0501 Blood HL-60_CTRL 17 13 892 36 0 76 468 MIR223,VSIG4
SE_02_057600045 chrX:65985212-66031514 Sample_02_0576 Blood HEL_sgLKB1e2 45 11 1109 46 0 86 767 MIR223,VSIG4
SE_02_083500154 chrX:65985240-66022636 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 154 5 909 36 0 76 541 MIR223,VSIG4
SE_02_134100080 chrX:65985244-66022123 Sample_02_1341 Blood MV411 80 6 888 36 0 75 447 MIR223,VSIG4
SE_02_006000112 chrX:65985270-66029672 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 112 5 1071 41 0 86 767 VSIG4,MIR223
SE_02_099500034 chrX:65985323-66022603 Sample_02_0995 Blood MOLM-13_empty vector 34 13 905 36 0 76 532 MIR223,VSIG4
SE_02_134000054 chrX:65985329-66021999 Sample_02_1340 Blood acute myeloid leukemia 54 10 878 36 0 75 425 MIR223,VSIG4
SE_02_099400041 chrX:65985349-66021760 Sample_02_0994 Blood MOLM13_SIK3TQ 41 10 869 35 0 74 398 MIR223,VSIG4
SE_02_054500009 chrX:65985360-66031910 Sample_02_0545 Bone marrow K562 WT 9 7 1110 46 0 86 767 MIR223,VSIG4
SE_01_005200135 chrX:65985364-66023654 Sample_01_0052 Blood neutrophil 135 4 930 36 0 77 613 VSIG4,MIR223
SE_02_099300041 chrX:65985386-66022587 Sample_02_0993 Blood MOLM-13_empty 41 16 902 36 0 76 530 MIR223,VSIG4
SE_02_057500024 chrX:65985398-66022877 Sample_02_0575 Blood MOLM13_sgLKB1e2 24 5 910 36 0 77 585 MIR223,VSIG4
SE_02_024700204 chrX:65985409-66029397 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 204 4 1062 40 0 86 767 VSIG4,MIR223
SE_02_005900118 chrX:65985461-66029988 Sample_02_0059 Haematopoietic and lymphoid tissue blood WT/Jurkat 118 7 1069 43 0 86 767 VSIG4,MIR223
SE_02_033700096 chrX:65985473-66021777 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 96 6 864 35 0 74 399 VSIG4,MIR223
SE_02_022500053 chrX:65985493-66029634 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 53 4 1064 41 0 86 767 VSIG4,MIR223
SE_02_130100247 chrX:65985494-66020928 Sample_02_1301 Blood PER-117 247 9 836 34 0 73 374 MIR223,VSIG4
SE_02_057700029 chrX:65985495-66023096 Sample_02_0577 Blood MOLM13_empty 29 3 910 36 0 77 613 MIR223,VSIG4
SE_01_004400205 chrX:65985495-66023337 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 205 4 916 36 0 77 613 VSIG4,MIR223
SE_01_002400521 chrX:65985508-66022648 Sample_01_0024 Blood CD14-positive-monocyte 521 5 900 36 0 76 542 VSIG4,MIR223
SE_02_025500097 chrX:65985524-66022275 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 97 6 886 36 0 76 474 VSIG4,MIR223
SE_02_025600126 chrX:65985553-66022771 Sample_02_0256 Peripheral blood MV411 126 1 906 36 0 76 563 VSIG4,MIR223
SE_02_082300022 chrX:65985559-66018147 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 22 2 761 32 0 65 147 MIR223,VSIG4
SE_02_062200082 chrX:65985593-66020197 Sample_02_0622 Blood EOL1_Naive 82 11 821 34 0 73 336 MIR223,VSIG4
SE_02_034300064 chrX:65985597-66022857 Sample_02_0343 Bone marrow HSPC_A0 64 8 907 36 0 77 583 VSIG4,MIR223
SE_02_098700030 chrX:65985597-66032080 Sample_02_0987 Blood K562_Control_1 30 16 1109 46 0 86 767 MIR223,VSIG4
SE_02_103300062 chrX:65985610-66031717 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 62 8 1100 46 0 86 767 MIR223,VSIG4
SE_02_010100419 chrX:65985628-66021389 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 419 4 852 35 0 74 374 MIR223,VSIG4
SE_02_057900043 chrX:65985630-66031123 Sample_02_0579 Blood HEL_sgNeg2 43 13 1092 45 0 86 767 MIR223,VSIG4
SE_02_034200061 chrX:65985631-66021808 Sample_02_0342 Liver HSPCs_F0 61 6 864 35 0 74 402 VSIG4,MIR223
SE_02_111600021 chrX:65985649-66031816 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 21 7 1102 46 0 86 767 MIR223,VSIG4
SE_02_057800022 chrX:65985675-66022994 Sample_02_0578 Blood MOLM-13_sgSIK3e4 22 9 906 36 0 77 602 MIR223,VSIG4
SE_02_005800131 chrX:65985687-66031132 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 131 7 1089 45 0 86 767 VSIG4,MIR223
SE_02_092800642 chrX:65985691-66023495 Sample_02_0928 Peripheral blood neutrophils_Ecoli 642 12 918 36 0 77 613 MIR223,VSIG4
SE_02_109800112 chrX:65985709-66031618 Sample_02_1098 Blood THP1_DMSO_noPMA 112 17 1097 46 0 86 767 MIR223,VSIG4
SE_02_109900044 chrX:65985713-66050454 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 44 28 1559 59 0 106 1066 MIR223,VSIG4,HEPH
SE_02_134500058 chrX:65985715-66024804 Sample_02_1345 Leukophereses leukophereses_p358 58 14 946 37 0 78 613 MIR223,VSIG4
SE_02_057400028 chrX:65985719-66022840 Sample_02_0574 Blood MOLM-13_sgNeg2 28 7 903 36 0 76 582 MIR223,VSIG4
SE_01_003900018 chrX:65985737-66031848 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 18 8 1100 46 0 86 767 VSIG4,MIR223,IR223
SE_02_058100029 chrX:65985750-66022934 Sample_02_0581 Blood MOLM13_empty_HG 29 5 903 36 0 77 592 MIR223,VSIG4
SE_02_143000272 chrX:65985756-66018184 Sample_02_1430 Blood Kasumi-3_mock-infected 272 8 758 32 0 65 147 MIR223,VSIG4
SE_02_054800097 chrX:65985763-66022887 Sample_02_0548 Blood THP-1_24h with EtOH 97 13 903 36 0 77 586 MIR223,VSIG4
SE_02_068200040 chrX:65985788-66023248 Sample_02_0682 Blood Kasumi-1 40 9 909 36 0 77 613 MIR223,VSIG4,HEPH
SE_02_082100085 chrX:65985790-66022975 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 85 5 903 36 0 77 602 MIR223,VSIG4
SE_02_092700473 chrX:65985792-66023191 Sample_02_0927 Peripheral blood neutrophils_US 473 10 906 36 0 77 613 MIR223,VSIG4
SE_02_046100057 chrX:65985796-66022591 Sample_02_0461 Blood MV-4-11-B cells 57 14 893 36 0 76 530 MIR223,VSIG4
SE_02_010400205 chrX:65985796-66023109 Sample_02_0104 Blood neutrophils 205 8 904 36 0 77 613 VSIG4,MIR223
SE_02_133200178 chrX:65985798-66022639 Sample_02_1332 Blood Monomac6_CTRL 178 13 894 36 0 76 542 MIR223,VSIG4
SE_02_084100363 chrX:65985805-66022824 Sample_02_0841 Blood THP-1_untr 363 7 901 36 0 76 581 MIR223,VSIG4
SE_02_054700003 chrX:65985807-66031618 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 3 18 1095 46 0 86 767 MIR223,VSIG4
SE_02_043100452 chrX:65985808-66023370 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 452 5 911 36 0 77 613 VSIG4,MIR223
SE_02_054600007 chrX:65985816-66031784 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 7 11 1097 46 0 86 767 MIR223,VSIG4
SE_02_134200011 chrX:65985825-66022472 Sample_02_1342 Blood NB4 11 18 887 36 0 76 501 MIR223,VSIG4
SE_01_008400972 chrX:65985866-66023644 Sample_01_0084 Spleen spleen 972 6 920 36 0 77 613 VSIG4,MIR223
SE_02_111200541 chrX:65985874-66021816 Sample_02_1112 T lymphocyte THP-6 T-ALL 541 6 859 35 0 74 402 MIR223,VSIG4
SE_02_102800028 chrX:65985874-66022189 Sample_02_1028 Blood HL-60_WT 28 14 876 36 0 76 460 MIR223,VSIG4
SE_02_153000254 chrX:65985875-66024720 Sample_02_1530 Peripheral blood neutrophils_0BA0X 254 7 943 37 0 78 613 MIR223,VSIG4
SE_02_092600054 chrX:65985911-66021656 Sample_02_0926 Blood NB4_1 54 40 855 35 0 74 389 MIR223,VSIG4
SE_02_152900180 chrX:65985912-66025214 Sample_02_1529 Peripheral blood neutrophils_0BC75 180 11 950 37 0 80 653 MIR223,VSIG4
SE_02_135000022 chrX:65985920-66023681 Sample_02_1350 Leukophereses leukophereses_p456 22 9 919 36 0 77 613 MIR223,VSIG4
SE_02_153100129 chrX:65985925-66024542 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 129 9 935 37 0 78 613 MIR223,VSIG4
SE_02_098800117 chrX:65985935-66031638 Sample_02_0988 Blood K562_EPZ 117 20 1093 46 0 86 767 MIR223,VSIG4
SE_02_134700038 chrX:65985937-66021613 Sample_02_1347 Leukophereses leukophereses_p401 38 16 855 35 0 74 383 MIR223,VSIG4
SE_02_001600664 chrX:65986121-66025472 Sample_02_0016 Blood erythroblasts 664 6 951 36 0 80 665 VSIG4,MIR223
SE_02_134900033 chrX:65986155-66020930 Sample_02_1349 Leukophereses leukophereses_p411 33 10 820 33 0 73 374 MIR223,VSIG4
SE_02_149200594 chrX:65986332-66022886 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 594 7 887 35 0 77 586 MIR223,VSIG4
SE_02_087500534 chrX:65986414-66022495 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 534 10 874 35 0 76 507 MIR223,VSIG4
SE_02_134800077 chrX:65986471-66021138 Sample_02_1348 Leukophereses leukophereses_p408 77 12 821 34 0 73 374 MIR223,VSIG4
SE_02_134300037 chrX:65986489-66019857 Sample_02_1343 Leukophereses leukophereses_p195 37 11 788 33 0 73 302 MIR223,VSIG4
SE_02_133100249 chrX:65986502-66021229 Sample_02_1331 Blood Molm13_CTRL 249 11 824 34 0 73 374 MIR223,VSIG4
SE_02_046300033 chrX:65986514-66022679 Sample_02_0463 Blood OCI-AML3 cells 33 25 876 35 0 76 545 MIR223,VSIG4
SE_02_131300340 chrX:65986558-66021513 Sample_02_1313 Brain hMGLs_CD33_SNP 340 14 830 34 0 74 374 MIR223,VSIG4
SE_02_109600259 chrX:65986636-66020830 Sample_02_1096 Blood CD34 Erythroid cells_Don003 259 10 803 33 0 73 374 MIR223,VSIG4
SE_02_131500457 chrX:65986859-66021607 Sample_02_1315 Brain hMGLs_INPP5D SNP 457 15 831 33 0 74 381 MIR223,VSIG4
SE_02_046400016 chrX:65987007-66017595 Sample_02_0464 Bone marrow MOLM-13 16 27 710 29 0 64 147 MIR223,VSIG4
SE_02_109500165 chrX:65987654-66021922 Sample_02_1095 Blood CD34 Erythroid cells_Don002 165 10 809 32 0 75 414 MIR223,VSIG4
SE_02_134400066 chrX:65987667-66017538 Sample_02_1344 Leukophereses leukophereses_p217 66 8 684 28 0 64 147 MIR223,VSIG4
SE_02_146000974 chrX:65987760-66018169 Sample_02_1460 Blood Mutz-3 974 10 698 28 0 65 147 MIR223,VSIG4
SE_02_084200032 chrX:65987820-66016939 Sample_02_0842 Umbilical cord blood HSPC-derived early erythroid progenitors 32 14 671 28 0 64 93 MIR223,VSIG4
SE_00_005500803 chrX:65987829-66021492 Sample_00_0055 Spleen spleen 34y 803 17 792 31 0 74 374 MIR223,VSIG4
SE_02_142400255 chrX:65995764-66031329 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 255 7 842 35 0 79 767 MIR223,VSIG4
SE_02_133900098 chrX:65997696-66017268 Sample_02_1339 Bone marrow ficolled whole bone marrow 98 9 443 19 0 50 131 MIR223,VSIG4
SE_02_073900744 chrX:65999702-66021925 Sample_02_0739 Blood Nalm6 744 7 528 22 0 49 414 MIR223,VSIG4
SE_02_012200443 chrX:65999967-66024481 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 443 5 591 22 0 51 613 VSIG4,MIR223
SE_02_149100012 chrX:66000198-66018465 Sample_02_1491 Blood KBM-7 12 6 415 18 0 41 147 MIR223,VSIG4
SE_02_131800332 chrX:66000283-66022034 Sample_02_1318 Brain hMGLs_SORL1-A528T 332 10 515 21 0 49 431 MIR223,VSIG4
SE_02_075000771 chrX:66000494-66021595 Sample_02_0750 Lymphoma Rec-1_GSI 771 10 499 20 0 47 379 MIR223,VSIG4
SE_02_131400489 chrX:66002489-66018276 Sample_02_1314 Brain hMGLs_TREM2-KO 489 6 366 18 0 38 147 MIR223,VSIG4
SE_02_131200291 chrX:66002522-66021658 Sample_02_1312 Brain hMGLs_WT 291 9 458 20 0 45 389 MIR223,VSIG4
SE_02_014700223 chrX:66014874-66034250 Sample_02_0147 Blood CD4_T_cells 223 3 490 20 0 47 962 VSIG4,MIR223
Genomic distribution of SEs associated with MIR223
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR223

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)