SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_054700003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: K562_MYO1D_Hub_KO
Genomic region: chrX:65985807-66031618
Size: 45811
Super-enhancer rank 3
Number of SE elements: 18
ChIP density(Case|Control): 200143.6779|4384.1127
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR223;
ROSE Overlap MIR223; VSIG4;
ROSE Proximal VSIG4;
ROSE Closest MIR223;
Lasso VSIG4;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_054700003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers